CsaV3_5G013870.1 (mRNA) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G013870.1
TypemRNA
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionTransmembrane protein
Locationchr5 : 10657224 .. 10662516 (+)
Sequence length369
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTTATTTTTGAAAAAAGTACATCATTCTCAAAAGTTATCCCTTCACGCCCCCACGTAAACCCCCCTCAAATCCGAGTCCTCAATTTTGAACCTTCTCATTTGGACCCCTAATTGTTCTTCAATTTTCACTCGCTCTCAGTTTTCAGCTGTAGTCTCTTCAATCTACATTTCACCCTTCCCCAAATTCTTTCATCCTTTAACTGCCCAACCTTCAATCGCAGCCTGCTTCTAAGTTTGTTCGCGATTCATTTCCGTGAGCCTGTAATGGTGATTCGATGTTTATAACCCTTGTTTTGTTCATTACTAGGAGCCTCCAATCTTGCAAATATGCGGCTGTATTACGGAGCCAAAGAGATTCTAAAGATTCAAAAATTTCGCAGAATTGTGTCCTATACTGGATTCTATCTTTTCGCTTCTGTTTTGAGCTACGCTTATACAAGCAATACGTGAGTTTAGCCATTGCCCATCGAAGTTCTCCTCACTTTTAGTTTTATTCTAATTTTTTTTCTGGTATTGCAGAACTAGAGCTGGGTATTCTCGAGGGGATCAATTTTATGCTTCTTACCCTGCTGGTACAGAGCTCTTGACAGACACCACAAAGGTTTTGGCATTCTTTGATTTGGGTTCACTGTTTTTTAAGTTCTATGACTCTTGGTACTAATTTTCTTTTTAATTGCTGTAGTTGTATAAAGCTGCTCTTGGTAATTGCTTTGAATTAGAGGAATGGGGTCCAATTGAATTTTGCATCATGGCTAAACATTTTGATCGTCAAGGAAAATCGCCTTATGCATATCATTCTGTAAGTTTGTCCTTGGCTGGTCTCTTTTTAGTGTGGGGCACAATTTAATTACATCTGAGTATTGAACTTTTATGTATTCCATTGATTTCTAGTCCGATCTTGTGTTCAATTTTGTGATATTATTATGGGAGTTGAAAAATATTCGTATAGAAGTTGCTGTGCAGCTACTTAGAATTTTGAAATTTTCTGCTGTGTCAAGAGTTCAACAATGATGTTAAGATGAAAAAGGACCCTTTTCTAAAGTCCTTATGGCAATGAAATGAGAGGAGCATGGAGAGCATGCTAATATCTAAGTTTTGCAAGAGCATTTCTTTAATTTTATTGAGTTTGTTTTGGAAGATGGGAGAAACGTTAGGTTTTGGGAAGATAGTTGGTGTAGCCAACAACCCCTGTGTATCATGATATTTATACCAACTCCACTAAAAAAGAAGCAGCTCTTGCTTATTTTTGGAACTCCACAAGCCAATCTTGGGATTTAGGGGTTGAGTAGAAACCTTTTCAATAGAAAATTTGGTACCTACATTGCTCTTGCTCAATCACCGAACTCTTTTCAAATCATTTTCACTCATTTCTCTCCAACTCCACCCTCTTTTGAATTCTCCAAATCTCCCCGCCAACCAACCTTCTTGTCGGTTTCTGCCAGTTTCCCCATAGTTTGGATGCCAACCCTCTTGCCAGTCGCCAGTTTCTTTATGTATCTCTTCTTTTAATTGTTTTTCTATTTTTCATGCTTTGTGGTCGAATAATGGACAATATGATATCAAATCAATTATCATATAATTTTTTTTTCACTAAATCTTATTTGGTTATTTTTCTGTTTTTATTTTAAATTTAGTATGGCAGAATCATCTTCAAGTCATACCGAAATTAATTCAAGAATGACTACTGAAGATGAAAAAAAACTGTCATGGCAATATGTGACAAAACATGAAAGATTTTGTGGTGTTGGAGGGAATTGTGCTTGGCAATTGAATTTTTGTCAAGAAAGGAGGAAAGGTTCTTATACAAGAGTTTGGACACACCTATTAGAAATGGTTGGATTTGGGATTGGGGTATGTAAGGTCACCCCTAAAGATCTTGCTGACATGCAAAGGTTAGAAGAGGAAGCTAAAGTTCGTGTGGCAAACAATGCTCCTAAGTAAGTTCCATTACCACCTTCACAACATATGCAAACTAAATCTCAATCTTTTGGATCAGGAAGCATGGGTAGCTATTCATATTCTTTTTCACCAATGGAACAAAAGAGAAGTAAAGGAAATGTTAGTGCTCTTGAGAAGTCATTTAATTTGGTACTTCGTGATCAAGTAGATTCGGAGATAGCTAGAATGTTTTGTTCTTCAAATTTGCCTTTCCATTTGGTTAGAAATCTACATTATGTGAACCCTTTTGCTTTGGTTGCAAATAATTTTTTGTCCGGTTATTTACCTCCGGGTATAATAAACTGAGAACAAGTCTTCTTCAAAAAGAAAAGGCAAATGTCGAGAGATTGTTGCAACCTATTAAAACTACATGATCTGCAAAGGGAGTAAGTATTATTAGCAATGGTTGGAGTGATTTGCAAAGGAAGCCATTAATTAATTTTATGGTAGTTACAAAAGGAGGACCAATGTTTATTACAGCTGTAGATTGCTTAGATGAGAGAAATGATAAATATTTCATAGCAAATCTGATGAAAGACCTCATAAATGAGGTGAGACATGAAAATGTGATTAAAATAATCACTCACAATGTTGCAAATTGTAAGGGTTTAAGATAAATTATTGAATCACAGTTTCCCAACATAGTTTGGACACCACGTGTAGTTCATACCCTTAATCTTGCTTGGAAGAACATATGTGCTGCAAGAAACATTGATAGTCCCAACATGTATTTGTAGAGTGTAGCTGGATTTCTGAAATTTCTGATAGTGTTATGTTTATATAACACTTTATAATGAACCATCCTATTGGACTAGCTATGTTCAATGAGTTTGTATTTGAAGTTACTTGCAGTAGCTTAAACACATTTTGCATCTACCATCATTATGCTTAGAAGATTTAAACTCATTAAGGGTGGTTTACAAATAATCATTACCAGTGATAAGTGGGGATGCTACAGAGAAGATGATATGGGGAAAGCAAGACGTGTAAAGTAGTTGGTGCTTGATGATGCTTGGTGGGAAAAGGTTGATTATATCATTTCTTTTACTGGTCCTATTTATGGTATGATTAGAGATTGTGATATGGACAAACCTTGCCTCAATTTGGTATATGATATGTACGACACCACAATAGAAAAAGTGAAATTGACAATGTGTAAACATGAAGGAAAGCGCATCGATGAATTTTCATCTTTTTATGACGTGGTGCACCAAATTTTGATTGATCGATGGAATAAAAATAACACCCCTCCATTGTAGCACATTGTCTAAATCCAAGGTACTATAAGTCTATCTTAGATCTTTATTTTATTTTTTCAATTCCCAAACACACCCTAAAGTTTGGTCTACTTAAATTTTATTTAGGTATTGTTGTGCACAATGGCTTCAAGAAGACAAGTCTCAAGTCCCACCACATCAAGACATAGAAGTAGAAATAAAGAGGATGAAGGGTATTAAGAAATATTTTAGTTTAGAGGATGAGTGCACAAAAGTGAACATTGAATTAGCCAATTTATCTACAATGTCTGAACAGTTTGCTAATCATGAATCCATACGTAATAGATATGATATGCCTTCGAACAGTTGCTAGGCCATCCATGGTGCGTTTACTCCAACTTTACCATCACTAGCTATAAAGTTACTTATTCAACCTTCACCCCCCTCATGTTGTGAGAGAACTTTGAGTTCATATTCATTTGTGCACTCCATGAGAAGAAACAAGATGACACCGCAACGTGTAGAAGACTTGGTGTACATCCATAGCATTCTACGCCTTTTATCAAGAAGAACTCCTGAATATCTCAAAGTAAACAAAAATGTGGAACATTGTTGGGGATTCGTTTGATTCATTTGAAGATGCGAGAATGCTTGAGGTGGCTAGTTTATCTTTGGACGAACCAAGAAGCTATAGTTTTAGCAATGCTGGTGGTGAGGCTCAAGTTCAGGATTCTCAATAGGACATTGAAGAAGAATGAAAACATGTTCTTGATTTTATTTTGTAGTTTTGTAGTTTTTTACCTTTTGGCCTTTGGCTTTTGTTGTGTTGAACAAACTACTCTACTAAAACTTATTATGTGTTATGACTCTAAACTTATTGTTTTGATGTTTTAATTGGAATGTTTCACGATATGTTTATATGCATGACATTTATTTAATTTTTTACTAAAAATTTATCATGTCCTCAACGTGTCGTGTCCTACTTTTTTCTAAAATAGTGTTGTCGTCGTGACGTCGTGTCGCGTGTCCATATCTGTGTTTCCTAGCAATCAATCGGACAATTCTAACACTTCATTCCTTCCTTGGTGGTGATATCCATTTCTTCTCTTGGTTATGAAAATTTCGTGACTTCTTTTCCTCCGGTTTTATTTGATACATAATTTTATAAGAAACAATATTATTTAGTGCCTCCAAACTAGAAGTTCAGGATTTTTGCTCTTTCCCATTTGGTGTGTTTCTCAAGTTAAATATGCAAGTTTTGCACTTGGCAATGGAGAAAACCCAGTGTTAAAATGATTTATGTCATATAAGATTGAATATTTCCACTTGAACCCTTAAAAAGAAATAGAGCTAATGTATAAGATGAACATATATTTTGTTTTCTCGATATCAAAGGATATCTAATTCTGCTCAACTGCTATTCTTGGTTGTATTGGTTGTAGTTGTTTTATTTTGTTTCTTTGTTTCGTATGATTTTATGAATAAAAAACTTTATTTGCTTTTCAAAAAAGCAAATAAACACCATTTTCCAGAGCATTTTCTATTCACATCCTCAATACATTTCTCCCCTAACAATTTTAGGGTTGTATTATTTGAAGTATTAAAACATTATTTTTTTGCGAGGCTAACCGAAAAGGGAAGTCTATACCCAGGCCATTACAACTAAGTTGCCCTTTTTTGTTTGAAATTTGGCAGCAATACATGGCACATCTTCTGTCTCATGGACAACTTGATGGAAGTGGGTAGGATAGCATCAAATCAACCAATACCCGAAGAGCTTGACCTTGTTTGTTGGTACGAGCTGAGACTACACACCTCAATACTTGTGAATTTTGAGTATTGGGTTTCTAAATGACTGACTAAAGGATAGCTCAGTTAGTTAGGTTACTAATAACCTCATTTATGAGGGTCATAGGTTTAAATCTTCACCACTTTATTTGAATTGTATTATTCTTTAAATATATTTACAGCCATTACTCTGGACTGTTTGTTACCTTCTCTTATACTAGAATGTGCTATTGATATTCAATAAGACTGATGTCCACCTCTTCAACTGTTCCTATTTTTTATGAATATAAATACTTTTCTGGGATCTATTTTATGTATGTGTGTATAATGAATACTTTTCTTTGCTTTT

mRNA sequence

ATGCGGCTGTATTACGGAGCCAAAGAGATTCTAAAGATTCAAAAATTTCGCAGAATTGTGTCCTATACTGGATTCTATCTTTTCGCTTCTGTTTTGAGCTACGCTTATACAAGCAATACAACTAGAGCTGGGTATTCTCGAGGGGATCAATTTTATGCTTCTTACCCTGCTGGTACAGAGCTCTTGACAGACACCACAAAGTTGTATAAAGCTGCTCTTGGTAATTGCTTTGAATTAGAGGAATGGGGTCCAATTGAATTTTGCATCATGGCTAAACATTTTGATCGTCAAGGAAAATCGCCTTATGCATATCATTCTCAATACATGGCACATCTTCTGTCTCATGGACAACTTGATGGAAGTGGGTAG

Coding sequence (CDS)

ATGCGGCTGTATTACGGAGCCAAAGAGATTCTAAAGATTCAAAAATTTCGCAGAATTGTGTCCTATACTGGATTCTATCTTTTCGCTTCTGTTTTGAGCTACGCTTATACAAGCAATACAACTAGAGCTGGGTATTCTCGAGGGGATCAATTTTATGCTTCTTACCCTGCTGGTACAGAGCTCTTGACAGACACCACAAAGTTGTATAAAGCTGCTCTTGGTAATTGCTTTGAATTAGAGGAATGGGGTCCAATTGAATTTTGCATCATGGCTAAACATTTTGATCGTCAAGGAAAATCGCCTTATGCATATCATTCTCAATACATGGCACATCTTCTGTCTCATGGACAACTTGATGGAAGTGGGTAG

Protein sequence

MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDGSG
Homology
[Close]
BLAST of CsaV3_5G013870.1 vs. NCBI nr
Match: XP_004149132.1 (PREDICTED: uncharacterized protein LOC101204884 [Cucumis sativus] >KGN49556.1 hypothetical protein Csa_5G001030 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 1.3e-64
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE
Sbjct: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG
Sbjct: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

[Close]
BLAST of CsaV3_5G013870.1 vs. NCBI nr
Match: XP_022976595.1 (uncharacterized protein LOC111476941 [Cucurbita maxima] >XP_022976600.1 uncharacterized protein LOC111476941 [Cucurbita maxima] >XP_022976608.1 uncharacterized protein LOC111476941 [Cucurbita maxima])

HSP 1 Score: 249.6 bits (636), Expect = 5.5e-63
Identity = 116/122 (95.08%), Postives = 121/122 (99.18%), Query Frame = 0 

Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           MRLYYGAKE+LKIQKFRR+VSYTGFYLF SVLSYAYTSNTTRAGYSRGDQFYASYPAGTE
Sbjct: 1   MRLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDTTKLYKAALGNCFE+EEWGPIEFC+MAKHF+RQGKSPYAYHSQYMAHLLSHGQLDG
Sbjct: 61  LLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKSPYAYHSQYMAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

[Close]
BLAST of CsaV3_5G013870.1 vs. NCBI nr
Match: XP_008454751.1 (PREDICTED: uncharacterized protein LOC103495078 isoform X1 [Cucumis melo] >XP_016901660.1 PREDICTED: uncharacterized protein LOC103495078 isoform X1 [Cucumis melo])

HSP 1 Score: 246.9 bits (629), Expect = 3.6e-62
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAY SNTTRAGYSRGDQFYASY AGTE
Sbjct: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYASNTTRAGYSRGDQFYASYSAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDT+KLYKAALGNCFELEEWGPIEFCIMAKHF+RQGKSPYAYHSQYMAHLLSHGQLDG
Sbjct: 61  LLTDTSKLYKAALGNCFELEEWGPIEFCIMAKHFERQGKSPYAYHSQYMAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

[Close]
BLAST of CsaV3_5G013870.1 vs. NCBI nr
Match: XP_022942452.1 (uncharacterized protein LOC111447487 [Cucurbita moschata] >XP_022942453.1 uncharacterized protein LOC111447487 [Cucurbita moschata] >XP_022942454.1 uncharacterized protein LOC111447487 [Cucurbita moschata] >XP_023534356.1 uncharacterized protein LOC111795941 [Cucurbita pepo subsp. pepo] >XP_023534363.1 uncharacterized protein LOC111795941 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.9 bits (629), Expect = 3.6e-62
Identity = 115/122 (94.26%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           M LYYGAKE+LKIQKFRR+VSYTGFYLF SVLSYAYTSNTTRAGYSRGDQFYASYPAGTE
Sbjct: 1   MGLYYGAKEVLKIQKFRRLVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDTTKLYKAALGNCFE+EEWGPIEFC+MAKHF+RQGKSPYAYHSQYMAHLLSHGQLDG
Sbjct: 61  LLTDTTKLYKAALGNCFEIEEWGPIEFCVMAKHFERQGKSPYAYHSQYMAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

[Close]
BLAST of CsaV3_5G013870.1 vs. NCBI nr
Match: XP_022150012.1 (uncharacterized protein LOC111018291 isoform X2 [Momordica charantia])

HSP 1 Score: 246.5 bits (628), Expect = 4.7e-62
Identity = 117/122 (95.90%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           MRLYYGAKEILKIQKFRRIVSYTGFYLF SVLSYAYTSNTTRAGYSRGDQFYASYPAGTE
Sbjct: 91  MRLYYGAKEILKIQKFRRIVSYTGFYLFVSVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 150

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDT KLYKAALGNCFE EEWGPIEFCIMAKHF+RQGKSPYAYH+QYMAHLLSHGQLDG
Sbjct: 151 LLTDTAKLYKAALGNCFESEEWGPIEFCIMAKHFERQGKSPYAYHAQYMAHLLSHGQLDG 210

Query: 121 SG 123
           SG
Sbjct: 211 SG 212

[Close]
BLAST of CsaV3_5G013870.1 vs. TAIR10
Match: AT1G14990.2 (unknown protein)

HSP 1 Score: 199.1 bits (505), Expect = 1.5e-51
Identity = 94/124 (75.81%), Postives = 103/124 (83.06%), Query Frame = 0 

Query: 9   EILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTELLTDTTKL 68
           E++KIQK RR VSY GFY F + L++ YT+NTTRAGYSRGDQFYASYPAGTELLTDT KL
Sbjct: 9   EVIKIQKLRRAVSYAGFYCFTAALTFFYTNNTTRAGYSRGDQFYASYPAGTELLTDTAKL 68

Query: 69  YKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHS----------QYMAHLLSHGQL 123
           YKAALGNC+E E+WGP+EFCIMAKHFDRQGKSPY YHS          QYMAHLLS GQL
Sbjct: 69  YKAALGNCYESEDWGPVEFCIMAKHFDRQGKSPYVYHSVSFHKSRILMQYMAHLLSQGQL 128

[Close]
BLAST of CsaV3_5G013870.1 vs. TrEMBL
Match: tr|A0A0A0KPE6|A0A0A0KPE6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001030 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 8.7e-65
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE
Sbjct: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG
Sbjct: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

[Close]
BLAST of CsaV3_5G013870.1 vs. TrEMBL
Match: tr|A0A1S3BZF5|A0A1S3BZF5_CUCME (uncharacterized protein LOC103495078 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495078 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.4e-62
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0 

Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAY SNTTRAGYSRGDQFYASY AGTE
Sbjct: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYASNTTRAGYSRGDQFYASYSAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDT+KLYKAALGNCFELEEWGPIEFCIMAKHF+RQGKSPYAYHSQYMAHLLSHGQLDG
Sbjct: 61  LLTDTSKLYKAALGNCFELEEWGPIEFCIMAKHFERQGKSPYAYHSQYMAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

[Close]
BLAST of CsaV3_5G013870.1 vs. TrEMBL
Match: tr|A0A2P4LU15|A0A2P4LU15_QUESU (F-box protein skip23 OS=Quercus suber OX=58331 GN=CFP56_39254 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.0e-58
Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 0 

Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           MRLY G KEILKIQKFRRIVSYTGFY FA+++SYAYTSNTTRAGYSR DQFYASYPAGTE
Sbjct: 252 MRLYDGVKEILKIQKFRRIVSYTGFYCFAALVSYAYTSNTTRAGYSRADQFYASYPAGTE 311

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDT KLYKAALGNCFE+EEWGPIE+CIMAKHF+RQGKSPYAYH+QYMAHLLS+GQLDG
Sbjct: 312 LLTDTAKLYKAALGNCFEVEEWGPIEYCIMAKHFERQGKSPYAYHAQYMAHLLSNGQLDG 371

Query: 121 SG 123
           SG
Sbjct: 372 SG 373

[Close]
BLAST of CsaV3_5G013870.1 vs. TrEMBL
Match: tr|A0A067L0N5|A0A067L0N5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04698 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.9e-58
Identity = 110/122 (90.16%), Postives = 114/122 (93.44%), Query Frame = 0 

Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           M LY G KEILKIQKFRRIVSYTGFY F +VLSYAYTSNTTRAGYSR DQFYASYPAGTE
Sbjct: 1   MMLYDGFKEILKIQKFRRIVSYTGFYCFVAVLSYAYTSNTTRAGYSRADQFYASYPAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDT KLYKAA+GNCFE E+WGPIEFCIMAKHFDRQGKSPYAYH+QYMAHLLSHGQLDG
Sbjct: 61  LLTDTAKLYKAAVGNCFESEDWGPIEFCIMAKHFDRQGKSPYAYHAQYMAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

[Close]
BLAST of CsaV3_5G013870.1 vs. TrEMBL
Match: tr|A0A2C9UGI1|A0A2C9UGI1_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G128100 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.9e-58
Identity = 110/122 (90.16%), Postives = 114/122 (93.44%), Query Frame = 0 

Query: 1   MRLYYGAKEILKIQKFRRIVSYTGFYLFASVLSYAYTSNTTRAGYSRGDQFYASYPAGTE 60
           M LY G KEILKIQKFRR+VSYTGFY F +VLSYAYTSNTTRAGYSR DQFYASYPAGTE
Sbjct: 1   MMLYDGFKEILKIQKFRRLVSYTGFYCFVAVLSYAYTSNTTRAGYSRADQFYASYPAGTE 60

Query: 61  LLTDTTKLYKAALGNCFELEEWGPIEFCIMAKHFDRQGKSPYAYHSQYMAHLLSHGQLDG 120
           LLTDT KLYKAALGNCFE EEWGPIEFCIMAKHFDRQGKSPYAYH+QY+AHLLSHGQLDG
Sbjct: 61  LLTDTAKLYKAALGNCFESEEWGPIEFCIMAKHFDRQGKSPYAYHAQYVAHLLSHGQLDG 120

Query: 121 SG 123
           SG
Sbjct: 121 SG 122

The following BLAST results are available for this feature:
BLAST of CsaV3_5G013870.1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149132.11.3e-64100.00PREDICTED: uncharacterized protein LOC101204884 [Cucumis sativus] >KGN49556.1 hy... [more]
XP_022976595.15.5e-6395.08uncharacterized protein LOC111476941 [Cucurbita maxima] >XP_022976600.1 uncharac... [more]
XP_008454751.13.6e-6296.72PREDICTED: uncharacterized protein LOC103495078 isoform X1 [Cucumis melo] >XP_01... [more]
XP_022942452.13.6e-6294.26uncharacterized protein LOC111447487 [Cucurbita moschata] >XP_022942453.1 unchar... [more]
XP_022150012.14.7e-6295.90uncharacterized protein LOC111018291 isoform X2 [Momordica charantia][more]
BLAST of CsaV3_5G013870.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G14990.21.5e-5175.81unknown protein[more]
BLAST of CsaV3_5G013870.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G013870.1 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KPE6|A0A0A0KPE6_CUCSA8.7e-65100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G001030 PE=4 SV=1[more]
tr|A0A1S3BZF5|A0A1S3BZF5_CUCME2.4e-6296.72uncharacterized protein LOC103495078 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A2P4LU15|A0A2P4LU15_QUESU6.0e-5889.34F-box protein skip23 OS=Quercus suber OX=58331 GN=CFP56_39254 PE=4 SV=1[more]
tr|A0A067L0N5|A0A067L0N5_JATCU7.9e-5890.16Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04698 PE=4 SV=1[more]
tr|A0A2C9UGI1|A0A2C9UGI1_MANES7.9e-5890.16Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G128100 PE=4 SV=... [more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsaV3_5G013870CsaV3_5G013870gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsaV3_5G013870.1CsaV3_5G013870.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_5G013870.1.exon1CsaV3_5G013870.1.exon1exon
CsaV3_5G013870.1.exon2CsaV3_5G013870.1.exon2exon
CsaV3_5G013870.1.exon3CsaV3_5G013870.1.exon3exon
CsaV3_5G013870.1.exon4CsaV3_5G013870.1.exon4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsaV3_5G013870.1.cds1CsaV3_5G013870.1.cds1CDS
CsaV3_5G013870.1.cds2CsaV3_5G013870.1.cds2CDS
CsaV3_5G013870.1.cds3CsaV3_5G013870.1.cds3CDS
CsaV3_5G013870.1.cds4CsaV3_5G013870.1.cds4CDS


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36712FAMILY NOT NAMEDcoord: 1..122