CsaV3_5G005880.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTGCAATTAAGTTTATTTATATATCAAGCTGCAAACAGCTAAGTTAGCTGCCCACTCTCCTTTTTTATTACAAATTTATTTCATCTCTCTCCCTCTCTCTCTCTCTACTTTCTCTCTCTACTTTCTCTCTCTTCAACAACGAAGAGGGAAAAAATTAAACAAAGAACACACAACAAATTCTTTGTTGCTTTGAAATAATTCTGCCCTTCAACCTTTCTTTTCACATTCTTTTTTTTTTTTTTCCATCACTTTCTCCACAAAAGAGGAACCCATCCCCTGTTTCTTTTTCCCTGGAAAATCTGAGATCGGAGGTGGGGGAAGGAAGGAAAAAAACAGAGGACTCTGTTTTTTTTTTTTGTGTGTGTGTGTTTGTGTAATGCTGGAATTAGTGGGTGGCGGGGAAACTGGGTGTTTGAGGCCGTTGGGTGGCAGATCCGGCGGCCGGGGATCTGACATTTTTGGATTTAATTTGTAAATCGTGAAAACACCCAGAAGGGAGGAGGAGGAGAAGAAAGAGGGAGGGAAGGATGCTGAGAAGTAAGATTAGTAAAGGGGCACCGGCGGCGGCGGCGGCGGCGGCGGCGGGGGGATAAACGGAGAATCGAGGGGGATGGAGTGGGAAATGAGACCGGGTGGAATGTTGGTCCAAAAGAGAACCGAGTCGGAGAAAAACTCGGTTTCGGCTCCGAATGTACGAGTCCGAGTCAAGTACGGTTCGGTGTACCATGAAATCTCCATTAGCTCTCAAGCTACTTTCGGTAAATTTCCCTTTTCTTTTCTTCATTTGGTTTTCCTTTTCTTGTTATATTAAATTCAATTAAATCACTTTTAAGGCTATTTTTAAAAATAATTAAATTAAATCAACTCTATATAGTCTATTGAAAAAAAAAAATTCTATATTTTATAAATAGTTCTATTTTTTTTCGTCATTCAAGTTTCATTACTAGTTGTTGATTTAATAAAAATATTTAATTTATGTTACTTTTGGTGAATTTTAGGCAGTTTTGTAATTATTTGTTTTAAAAAAATTAAACTTATTTTTACTTTCAATTTTATATCTACATTTTTAGAGGCAGAAATAGAAAAATATCGTTGTATGTATAGTAAATAGTTTGTTTTTTTTTTTTTTTCTATTTTTAACCATTTTTTTATTTAGTAAATTTTAGTTAAATTCTAAAATTAAAAAAAAATTAAAATATATCTCTTTTTTTTAAGTTTTCAAAACTCAGTTAGTAAATACTCACACTCTCTAGACTTCAAAATCAAGCTAAATCTTAAAAACTTGTTTTTGTTTTATAAAATCGATAATAACCAAATCATCTTTTTATAACTGTTATATCGAAATGAGTGAAAACAGGCTTAATTTTTAAAAATATAAACGAAAAAATCAAACGACTAGGTTAAAAGAGTATCATCATTTTCCCAACTTCTTCTTCTTGATTTTCATCACCCTTTTAAGACAATAAAACATATATAAATGAATGGATACAAAAGTGATGTTTATAGACTTAATTTTAAGAAACAAAACAATTAGCAAACACAACCCTTTGAAACTTTGTATGGTATTTGTGAAACTTTGTATGGTATTTGTGAGTGGAATGATAAAATAGAAGTTTAATGTGAAAGAAATGAAATAATATATGCAGGGGAATTGAAGAAAATGTTGGTGGGGGCAACAGGATTGCACCAAGAAGACCAAAAATTGATATACAAAGAGAAAGAGAGGGATTCAAAAGCATTTCTAGATGTGTGTGGAGTTAAGGACCGTTCTAAAATATTACTTCAAGAAGACCCAATTAGTCAAGAGAAAAGACTTGTTGAGTTGAGAAAAAATGCCAAATTAGAGAAGGCTTCTAAATCCATTTCCCAAATCAGCTTGGAGGTTGACAGACTTGCTGGTCAGGTAAATTTCTTCACTAATTATCAAAACCTTTCCAATTTCCATTCTTTCTTTCTGTCTTTCGTTTCCTCTCATTTGCTTCTTACCTTACTCTAACATTTACATTCTCACTAAATACTCATCATCTTTTGTTTTATTGTTGACAAAAAAATAAAAGAAGAAGTTATAGTTCATTAACTTGTTCTGCTATTCTTCATTGTATTCACATGTTACTATTTTAAAAACCAGAAGCTAGAATTTAGTGAAATTTTGTGGTTATTAAAAGAGTAAATTTTGAAACTTTTGGACAAGTTAAAACAACACCACTCAAATGGTAACATTTTAAAAATTAATATAATAACTTCTAATAACTAAATTGAAATCAAACTCAAAAATATAAGAACTAAAAAAAGTGTAATATTTTAAAATACATGCACTAAATAGAAATTAAATCCAAAATTTAGCGACAAAAAAATTAATTACCAAAAGAACCTTTTAACTGGGTGTTTGGAACAAGTAGTTCTTATAATTTGTGTTTAAGGTGTGAATTACATTCATATGTGTTTGAATTATAAACTATTTTAGTTTTTAAAAAAATAGTAAATAATGTAGCAAATCATGAAGTAAAATAATAAATGCGGTAGCAAACTGAATTTTTGAAATAGTGTTGACTATATTAGTTAATTGGAGATTATAATGCAGTAAAGAAACGGTTATAGTATAGTCTTAGATAGAATGTTTGATATTTTGTAAATGTTGTTAAAAACTATAATTGAAGCATAAATCCAATAGAATTTTGGACACATTCCACACTAGTTTTGTTCTTTCATGATCGATCCATTTTAGTCTCAAATGGTCTCATTTTTGGTTCACTGGTAAAAGAAATAGGCATTGCATCCCCATTTACTTGTGTTCAAATAAATATATAATATGAGTTTGAATGTTTGAATGTGTACGTATGCATCTACATATACATGTACAATAGTCAAATACGTTAAGTAAGAGGAGTATTGAGTGATAGAATTGTAAGGAGACAATAGTTGATTTTGTCTAGAAAGTTTAGAGGTCCAAACTCATACTATTATAGATAAAAAGATGAGGGTCTTTTTTGTTATTAACTAAACTCCTCAAAATTTGTTCACAAATCATATATATAGGTTTCAGCATTGGAGTCAGTAATTGGAAAAGGTGGGAAAGTTGCTGAGAAAACAGTGTTGAATTTGATTGAGATGCTTATGGATCAATTGCTTAAATTGGATGGAATTATGGGAGATGGAGATGTCAAATTACAAAGGAAAATGCAGGTAACACTTCCAACTTTTTTTACTTTCATTTTCTCAACAAATTAAATTGTTACCTAATACCTTCATAATTCATGGTTTCGAAGGTAAGAAGAGTCCAAAAGTATGTTGAAACTTTAGACATATTGAAGATCAAAAACGAAAACCAAACCCCAACCCAAGTTCAGCAGAGGAGTTCAAATGGTTTGAATAATCAAGCCCAACCCCAAGAGAAGGCCAATGGAGTACATCAATCGCAACCGTCGATGGGGGATTCGTCATTGGTGCCCGAAAGGAAATCGACATCGGAGACAGTTGTTACTACGAGATGGGAGATATTTGACGCGATGCCACCATTGGTGCCAACCTCATCTTCAAATGCAGTCCCTGCAGCAGCAGCCAACAACAACAACAACCACCATGTTCAGCCCAAGTTCAATTGGGAATTTTTTGATTGAAAAATTTTCAAAAGAATTTTATTGTGTATTATTGTCTGATGTGTGATTGAGGTTTGTTACTTCTCTCTCTGTTGGTTTGATTTTTCTCTTCTATTCTTTTGTGTACTTATTAATTTTGGTAATTAGGACAATACCCTTTGTCATTAAGTTCAATAAATGGGTTTCTCTCTATACACATTTATCAATCCAACAATATGGTTTGCTATTCTCAACGTATATTCATTCGACTGTTTTAATTATCTATAATTCAAACGAATGTCTACAATAAATAATCATCCTTTTTACTTAACCGATAAGGAACTTTAATCACA ATGGAGTGGGAAATGAGACCGGGTGGAATGTTGGTCCAAAAGAGAACCGAGTCGGAGAAAAACTCGGTTTCGGCTCCGAATGTACGAGTCCGAGTCAAGTACGGTTCGGTGTACCATGAAATCTCCATTAGCTCTCAAGCTACTTTCGGGGAATTGAAGAAAATGTTGGTGGGGGCAACAGGATTGCACCAAGAAGACCAAAAATTGATATACAAAGAGAAAGAGAGGGATTCAAAAGCATTTCTAGATGTGTGTGGAGTTAAGGACCGTTCTAAAATATTACTTCAAGAAGACCCAATTAGTCAAGAGAAAAGACTTGTTGAGTTGAGAAAAAATGCCAAATTAGAGAAGGCTTCTAAATCCATTTCCCAAATCAGCTTGGAGGTTGACAGACTTGCTGGTCAGGTTTCAGCATTGGAGTCAGTAATTGGAAAAGGTGGGAAAGTTGCTGAGAAAACAGTGTTGAATTTGATTGAGATGCTTATGGATCAATTGCTTAAATTGGATGGAATTATGGGAGATGGAGATGTCAAATTACAAAGGAAAATGCAGGTAAGAAGAGTCCAAAAGTATGTTGAAACTTTAGACATATTGAAGATCAAAAACGAAAACCAAACCCCAACCCAAGTTCAGCAGAGGAGTTCAAATGGTTTGAATAATCAAGCCCAACCCCAAGAGAAGGCCAATGGAGTACATCGGAGACAGTTGTTACTACGAGATGGGAGATATTTGACGCGATGCCACCATTGGTGCCAACCTCATCTTCAAATGCAGTCCCTGCAGCAGCAGCCAACAACAACAACAACCACCATGTTCAGCCCAAGTTCAATTGGGAATTTTTTGATTGAAAAATTTTCAAAAGAATTTTATTGTGTATTATTGTCTGATGTGTGA ATGGAGTGGGAAATGAGACCGGGTGGAATGTTGGTCCAAAAGAGAACCGAGTCGGAGAAAAACTCGGTTTCGGCTCCGAATGTACGAGTCCGAGTCAAGTACGGTTCGGTGTACCATGAAATCTCCATTAGCTCTCAAGCTACTTTCGGGGAATTGAAGAAAATGTTGGTGGGGGCAACAGGATTGCACCAAGAAGACCAAAAATTGATATACAAAGAGAAAGAGAGGGATTCAAAAGCATTTCTAGATGTGTGTGGAGTTAAGGACCGTTCTAAAATATTACTTCAAGAAGACCCAATTAGTCAAGAGAAAAGACTTGTTGAGTTGAGAAAAAATGCCAAATTAGAGAAGGCTTCTAAATCCATTTCCCAAATCAGCTTGGAGGTTGACAGACTTGCTGGTCAGGTTTCAGCATTGGAGTCAGTAATTGGAAAAGGTGGGAAAGTTGCTGAGAAAACAGTGTTGAATTTGATTGAGATGCTTATGGATCAATTGCTTAAATTGGATGGAATTATGGGAGATGGAGATGTCAAATTACAAAGGAAAATGCAGGTAAGAAGAGTCCAAAAGTATGTTGAAACTTTAGACATATTGAAGATCAAAAACGAAAACCAAACCCCAACCCAAGTTCAGCAGAGGAGTTCAAATGGTTTGAATAATCAAGCCCAACCCCAAGAGAAGGCCAATGGAGTACATCGGAGACAGTTGTTACTACGAGATGGGAGATATTTGACGCGATGCCACCATTGGTGCCAACCTCATCTTCAAATGCAGTCCCTGCAGCAGCAGCCAACAACAACAACAACCACCATGTTCAGCCCAAGTTCAATTGGGAATTTTTTGATTGAAAAATTTTCAAAAGAATTTTATTGTGTATTATTGTCTGATGTGTGA MEWEMRPGGMLVQKRTESEKNSVSAPNVRVRVKYGSVYHEISISSQATFGELKKMLVGATGLHQEDQKLIYKEKERDSKAFLDVCGVKDRSKILLQEDPISQEKRLVELRKNAKLEKASKSISQISLEVDRLAGQVSALESVIGKGGKVAEKTVLNLIEMLMDQLLKLDGIMGDGDVKLQRKMQVRRVQKYVETLDILKIKNENQTPTQVQQRSSNGLNNQAQPQEKANGVHRRQLLLRDGRYLTRCHHWCQPHLQMQSLQQQPTTTTTTMFSPSSIGNFLIEKFSKEFYCVLLSDV
BLAST of CsaV3_5G005880.1 vs. NCBI nr
Match: XP_004143625.1 (PREDICTED: BAG family molecular chaperone regulator 2-like [Cucumis sativus] >KGN50430.1 hypothetical protein Csa_5G174560 [Cucumis sativus]) HSP 1 Score: 436.8 bits (1122), Expect = 5.9e-119 Identity = 234/240 (97.50%), Postives = 236/240 (98.33%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. NCBI nr
Match: XP_008467215.1 (PREDICTED: BAG family molecular chaperone regulator 3 [Cucumis melo]) HSP 1 Score: 409.1 bits (1050), Expect = 1.3e-110 Identity = 228/280 (81.43%), Postives = 238/280 (85.00%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. NCBI nr
Match: XP_023551463.1 (BAG family molecular chaperone regulator 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 367.9 bits (943), Expect = 3.4e-98 Identity = 192/216 (88.89%), Postives = 208/216 (96.30%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. NCBI nr
Match: XP_023534612.1 (BAG family molecular chaperone regulator 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 367.1 bits (941), Expect = 5.7e-98 Identity = 196/236 (83.05%), Postives = 216/236 (91.53%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. NCBI nr
Match: XP_022929027.1 (BAG family molecular chaperone regulator 2-like [Cucurbita moschata]) HSP 1 Score: 365.2 bits (936), Expect = 2.2e-97 Identity = 194/234 (82.91%), Postives = 213/234 (91.03%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. TAIR10
Match: AT5G07220.1 (BCL-2-associated athanogene 3) HSP 1 Score: 276.6 bits (706), Expect = 1.9e-74 Identity = 150/225 (66.67%), Postives = 181/225 (80.44%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. TAIR10
Match: AT5G52060.1 (BCL-2-associated athanogene 1) HSP 1 Score: 262.3 bits (669), Expect = 3.6e-70 Identity = 143/232 (61.64%), Postives = 179/232 (77.16%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. TAIR10
Match: AT5G62100.1 (BCL-2-associated athanogene 2) HSP 1 Score: 209.1 bits (531), Expect = 3.6e-54 Identity = 122/220 (55.45%), Postives = 153/220 (69.55%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. TAIR10
Match: AT3G51780.1 (BCL-2-associated athanogene 4) HSP 1 Score: 139.8 bits (351), Expect = 2.7e-33 Identity = 82/215 (38.14%), Postives = 128/215 (59.53%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. TAIR10
Match: AT5G14360.1 (Ubiquitin-like superfamily protein) HSP 1 Score: 95.1 bits (235), Expect = 7.6e-20 Identity = 48/109 (44.04%), Postives = 75/109 (68.81%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. Swiss-Prot
Match: sp|Q9LYP4|BAG3_ARATH (BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana OX=3702 GN=BAG3 PE=1 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 3.3e-73 Identity = 150/225 (66.67%), Postives = 181/225 (80.44%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. Swiss-Prot
Match: sp|Q0WPX7|BAG2_ARATH (BAG family molecular chaperone regulator 2 OS=Arabidopsis thaliana OX=3702 GN=BAG2 PE=1 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 4.5e-70 Identity = 142/209 (67.94%), Postives = 176/209 (84.21%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. Swiss-Prot
Match: sp|Q0WUQ1|BAG1_ARATH (BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana OX=3702 GN=BAG1 PE=1 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 6.5e-69 Identity = 143/232 (61.64%), Postives = 179/232 (77.16%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. Swiss-Prot
Match: sp|Q8RX71|BAG4_ARATH (BAG family molecular chaperone regulator 4 OS=Arabidopsis thaliana OX=3702 GN=BAG4 PE=1 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 4.9e-32 Identity = 82/215 (38.14%), Postives = 128/215 (59.53%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. Swiss-Prot
Match: sp|O60125|BAG1A_SCHPO (BAG family molecular chaperone regulator 1A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bag101 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 8.4e-08 Identity = 57/201 (28.36%), Postives = 94/201 (46.77%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. TrEMBL
Match: tr|A0A0A0KL80|A0A0A0KL80_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G174560 PE=4 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 3.9e-119 Identity = 234/240 (97.50%), Postives = 236/240 (98.33%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. TrEMBL
Match: tr|A0A1S3CT76|A0A1S3CT76_CUCME (BAG family molecular chaperone regulator 3 OS=Cucumis melo OX=3656 GN=LOC103504620 PE=4 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 8.7e-111 Identity = 228/280 (81.43%), Postives = 238/280 (85.00%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. TrEMBL
Match: tr|A0A2P5C9V2|A0A2P5C9V2_9ROSA (Molecular chaperone regulator OS=Trema orientalis OX=63057 GN=TorRG33x02_292730 PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 4.8e-85 Identity = 176/232 (75.86%), Postives = 199/232 (85.78%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. TrEMBL
Match: tr|W9S4S2|W9S4S2_9ROSA (BAG family molecular chaperone regulator 1 OS=Morus notabilis OX=981085 GN=L484_015737 PE=4 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 8.2e-85 Identity = 183/255 (71.76%), Postives = 206/255 (80.78%), Query Frame = 0
BLAST of CsaV3_5G005880.1 vs. TrEMBL
Match: tr|B9R9G5|B9R9G5_RICCO (Protein binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1497090 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 1.4e-84 Identity = 173/224 (77.23%), Postives = 199/224 (88.84%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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