CsaV3_4G036590 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATGCAATAATTATTAGAGAACACAAAAATTATTGAGTTCAATCCAAATTCATTATCAGTCATCGACATCATTTTGAAAATTCATAAATACCACCAAATAATTGAGCGCCAATTCTCCATTATCAACCACTGACGAAGTTATTGAAGTTCTTAATCAAACATGGAGAAATCTCGTGAATTTGCTGAACTAATCCTACACGCCATTAATATTCCTCTCTTCAATTCGTAATACCTTTCACTTTCTTCTCTGTCCACTTCCTAATTTGAATTTAATTTCCTCTCTGCCCCGTTACTCTTTCGAATTAATCACGTTCTCTTATGAAACCACTCTTTAAATCCCATGAAGTTTCTGATTCCTGCAACTCCACCGGCCGTCGTTTCCGTTTGGTTGATATTTTCCGGGAAGAAAACGAGGGCGGTGACGGGTTTTCTGGGGATTTGGGTATGTCCCGAGTGCGTGGCTTGTCGGATGAGTCTGTGAGCATTGACTGTTTGTCGCCTCGGCGGATTGTTGCTCGGTGGGTGGCTTCGTTCCGGCGACCGAAGCGGAGGAGAGCGCTTGAGGAGGTTAGGAGAGTGAAAGAGGGTGGAGATTCTGATGGTCCGTTGACGTGTTGTAGGTGCTCGAGGGATGGAGTGGACGGTGGTGCTTCCTCAGCTTCACCGGGAGTGATTGTAGGGCCAGGTGAGTGAGTATACTGATCGAATTGATTTGTGCTTGCGATTTTAATTGGTAGGATGGCTTTCGAATTGATAATGCTAGTGTATTTATCAATGTTAATCAAAACGATTAGGAAACGGAAGAGATGGTAATTTTCTAATGCCGAATGGATTATGCATGCCTACATCTGAATCTGGAAATTCGTATGCCGACTTTTCATATGATAACAAAAATTTGATCGAAGTTATATTGGCAACGTACTAAACTTCCTTTGATCTTTCTTTTTATGGGTTGATGATGGCTAAACATGTTTTTAATAACTCAAAATCAAATCAAATGGTATGAAAATTCCATCTCAAAGGGTATAATTAGACTTGAAATTGTTTTTGAAGAACTTTGTAAATAACAAAAGTAATTATAACCATTTCAAGATTGGGAGAGTCTAATGGATTGAGTTTTCTATATCTCTATGCTGTCCTTGTTTTCTCTTATTGTTTCAATTTGCTTGTGTGCTTAAAACTCACAGGACTGAGTAGGAAAGAAGACACATCATTCAACTTGGGAGTTGGGTGTAGTTTGTTGTCTCTTGTACTTGCAAGTAAAAATGAACTTTCGAAGATGGTAGATTTGAGGAGAGAAATGGAACATTTTCTTCAAGAGATCAAAGAGGATCTTGGAAGAAAAGACAATCACTTTGAGCCATTCCATTCAAATGCAGATGTGGCTTGTTCGTCTACGGATTGTCAAGACGGTCCTTGTTCTACCAGCCAGCTTTCATATCAGCAAGATTTTTCATCTCAAATTGTGTCTGATGCACAATCAACTATACCAAATCATTCCCGGATGTCTTGTTTGTATGAACAAGCTGGGGAATGTCAGGAACGAATCGACGAATTGGAATCTGAATTCGAGGCCGAGTTAGAACGTTTACAGCTTCACTTGGAAGTTGAAAGTTCTTCTGGACGCATAGAACATCTAAGAATTAAGGTATTGAACGAGATAGCTTTTTCTATCCAAATTGATTTGATGGGACCGGTTGGTTCATAATTGCTCTCTTAAAGTTTTTGCAGTCTACATAAAATTGATTTTCACATCCTTTGGTTTGATCTCATTGTTTAGGACTATTTTGGAGATCTTGACCAACATATATCATTATTAGATAATGAAAGGGGTAATCCATCGGCCTTACAAGTAGTTTGAGGTCCTTTGATTTTCAGATGTGGGATTCTCCATACGACCTTCAAGATGGTGTCGTTCATTAATCTTGGATCGGATCATTGTTTTTACCCAATATCATTAATTATTTTCTTATGCCTTGGTTTTATCTCATCCTTATAACCATTTTGATGATTTTGGCCAACACTGGTTATCTGGGATGCCGTAATACTTGGTTTTGGACTTTTTGCCATATAACTTCAGTGGTACTGCTCAAGTTCTTAGAAGGATGTAGGTAATATGATTTGAGGAGCAAAGAAGAAATATCTATGTGATAAGATGTGTCTTCAATCTATGGTAGTTCATGAGCACTCATCCTACTTAAAATTTTTAACATCATGTAGTAATATAATTCAAAATGATTTATCATATTTGAGGGGATGAAGATGTATATTTCTGACATATTATCTGTAATTTTAATGATGTATGCTGCATATTCAATTCTTGATTGCAAGTTCTGAAACTGTGTTGTGTGAAATGACAGACTGCGAAGAACACAAACTCGACAAGAAGCTGCTGTATGAGTTCTGGTGAAGTCACTGATCTCCAAGAAGATGGGACTGAGAGGCAAGAAGGAGTTCCGCCTGTAGAACTCGAAAGAAAGTTGCATGAACTGCTAGAAGCAAGGCAGCAAGAGCAGATAAAAGAACTCAAAGAGGCTCTAGAATGTGCCAAACAAGAGATTATTGATAAAGAATCTGAAGTTTCTTGGTGGAAAGAAACTGCAAAAGTTATTTCTAAGCATATTCCATCTCATTCACGACTTAGACTTGCTTCTCAATATGACCAGCTTCAACTACTTGGGTAAGCATCGTTCTACAATTTACAAAACCTCCTCAGAGTTCAGAGAGATTAATGTTATTGAAACGATGACTGAAGCTTTCGATACAGCCAAACATCACTATGTTTTTAAATTGAGAATTTCATATTTAGCGCATGTTTTGGAGTGATTTCTAATAATTTTGTCATGTTTAAAATCACTTCGAAAACCTGTTTAATATTTACTTCTACTCTTGTAAATACAAATTTCATATCAACAAAATTGATTTAGA ATGAAACCACTCTTTAAATCCCATGAAGTTTCTGATTCCTGCAACTCCACCGGCCGTCGTTTCCGTTTGGTTGATATTTTCCGGGAAGAAAACGAGGGCGGTGACGGGTTTTCTGGGGATTTGGGTATGTCCCGAGTGCGTGGCTTGTCGGATGAGTCTGTGAGCATTGACTGTTTGTCGCCTCGGCGGATTGTTGCTCGGTGGGTGGCTTCGTTCCGGCGACCGAAGCGGAGGAGAGCGCTTGAGGAGGTTAGGAGAGTGAAAGAGGGTGGAGATTCTGATGGTCCGTTGACGTGTTGTAGGTGCTCGAGGGATGGAGTGGACGGTGGTGCTTCCTCAGCTTCACCGGGAGTGATTGTAGGGCCAGGACTGAGTAGGAAAGAAGACACATCATTCAACTTGGGAGTTGGGTGTAGTTTGTTGTCTCTTGTACTTGCAAGTAAAAATGAACTTTCGAAGATGGTAGATTTGAGGAGAGAAATGGAACATTTTCTTCAAGAGATCAAAGAGGATCTTGGAAGAAAAGACAATCACTTTGAGCCATTCCATTCAAATGCAGATGTGGCTTGTTCGTCTACGGATTGTCAAGACGGTCCTTGTTCTACCAGCCAGCTTTCATATCAGCAAGATTTTTCATCTCAAATTGTGTCTGATGCACAATCAACTATACCAAATCATTCCCGGATGTCTTGTTTGTATGAACAAGCTGGGGAATGTCAGGAACGAATCGACGAATTGGAATCTGAATTCGAGGCCGAGTTAGAACGTTTACAGCTTCACTTGGAAGTTGAAAGTTCTTCTGGACGCATAGAACATCTAAGAATTAAGGACTATTTTGGAGATCTTGACCAACATATATCATTATTAGATAATGAAAGGGGTAATCCATCGGCCTTACAAGTAGTTTGA ATGAAACCACTCTTTAAATCCCATGAAGTTTCTGATTCCTGCAACTCCACCGGCCGTCGTTTCCGTTTGGTTGATATTTTCCGGGAAGAAAACGAGGGCGGTGACGGGTTTTCTGGGGATTTGGGTATGTCCCGAGTGCGTGGCTTGTCGGATGAGTCTGTGAGCATTGACTGTTTGTCGCCTCGGCGGATTGTTGCTCGGTGGGTGGCTTCGTTCCGGCGACCGAAGCGGAGGAGAGCGCTTGAGGAGGTTAGGAGAGTGAAAGAGGGTGGAGATTCTGATGGTCCGTTGACGTGTTGTAGGTGCTCGAGGGATGGAGTGGACGGTGGTGCTTCCTCAGCTTCACCGGGAGTGATTGTAGGGCCAGGACTGAGTAGGAAAGAAGACACATCATTCAACTTGGGAGTTGGGTGTAGTTTGTTGTCTCTTGTACTTGCAAGTAAAAATGAACTTTCGAAGATGGTAGATTTGAGGAGAGAAATGGAACATTTTCTTCAAGAGATCAAAGAGGATCTTGGAAGAAAAGACAATCACTTTGAGCCATTCCATTCAAATGCAGATGTGGCTTGTTCGTCTACGGATTGTCAAGACGGTCCTTGTTCTACCAGCCAGCTTTCATATCAGCAAGATTTTTCATCTCAAATTGTGTCTGATGCACAATCAACTATACCAAATCATTCCCGGATGTCTTGTTTGTATGAACAAGCTGGGGAATGTCAGGAACGAATCGACGAATTGGAATCTGAATTCGAGGCCGAGTTAGAACGTTTACAGCTTCACTTGGAAGTTGAAAGTTCTTCTGGACGCATAGAACATCTAAGAATTAAGGACTATTTTGGAGATCTTGACCAACATATATCATTATTAGATAATGAAAGGGGTAATCCATCGGCCTTACAAGTAGTTTGA MKPLFKSHEVSDSCNSTGRRFRLVDIFREENEGGDGFSGDLGMSRVRGLSDESVSIDCLSPRRIVARWVASFRRPKRRRALEEVRRVKEGGDSDGPLTCCRCSRDGVDGGASSASPGVIVGPGLSRKEDTSFNLGVGCSLLSLVLASKNELSKMVDLRREMEHFLQEIKEDLGRKDNHFEPFHSNADVACSSTDCQDGPCSTSQLSYQQDFSSQIVSDAQSTIPNHSRMSCLYEQAGECQERIDELESEFEAELERLQLHLEVESSSGRIEHLRIKDYFGDLDQHISLLDNERGNPSALQVV
BLAST of CsaV3_4G036590 vs. NCBI nr
Match: XP_004145585.2 (PREDICTED: protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like [Cucumis sativus] >KGN55432.1 hypothetical protein Csa_4G651980 [Cucumis sativus]) HSP 1 Score: 539.7 bits (1389), Expect = 6.6e-150 Identity = 275/276 (99.64%), Postives = 275/276 (99.64%), Query Frame = 0
BLAST of CsaV3_4G036590 vs. NCBI nr
Match: XP_008452855.1 (PREDICTED: protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION [Cucumis melo]) HSP 1 Score: 505.4 bits (1300), Expect = 1.4e-139 Identity = 262/278 (94.24%), Postives = 267/278 (96.04%), Query Frame = 0
BLAST of CsaV3_4G036590 vs. NCBI nr
Match: XP_023524241.1 (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 407.5 bits (1046), Expect = 3.9e-110 Identity = 216/278 (77.70%), Postives = 238/278 (85.61%), Query Frame = 0
BLAST of CsaV3_4G036590 vs. NCBI nr
Match: XP_022982454.1 (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like [Cucurbita maxima]) HSP 1 Score: 403.3 bits (1035), Expect = 7.3e-109 Identity = 214/277 (77.26%), Postives = 235/277 (84.84%), Query Frame = 0
BLAST of CsaV3_4G036590 vs. NCBI nr
Match: XP_022940269.1 (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like [Cucurbita moschata]) HSP 1 Score: 402.5 bits (1033), Expect = 1.3e-108 Identity = 213/277 (76.90%), Postives = 235/277 (84.84%), Query Frame = 0
BLAST of CsaV3_4G036590 vs. TAIR10
Match: AT4G31805.1 (WRKY family transcription factor) HSP 1 Score: 59.7 bits (143), Expect = 3.6e-09 Identity = 68/235 (28.94%), Postives = 98/235 (41.70%), Query Frame = 0
BLAST of CsaV3_4G036590 vs. Swiss-Prot
Match: sp|Q6NQ99|POLAR_ARATH (Protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION OS=Arabidopsis thaliana OX=3702 GN=POLAR PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 6.5e-08 Identity = 68/235 (28.94%), Postives = 98/235 (41.70%), Query Frame = 0
BLAST of CsaV3_4G036590 vs. TrEMBL
Match: tr|A0A0A0L4A3|A0A0A0L4A3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651980 PE=4 SV=1) HSP 1 Score: 539.7 bits (1389), Expect = 4.3e-150 Identity = 275/276 (99.64%), Postives = 275/276 (99.64%), Query Frame = 0
BLAST of CsaV3_4G036590 vs. TrEMBL
Match: tr|A0A1S3BVN0|A0A1S3BVN0_CUCME (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION OS=Cucumis melo OX=3656 GN=LOC103493752 PE=4 SV=1) HSP 1 Score: 505.4 bits (1300), Expect = 9.1e-140 Identity = 262/278 (94.24%), Postives = 267/278 (96.04%), Query Frame = 0
BLAST of CsaV3_4G036590 vs. TrEMBL
Match: tr|A0A2I4G6Q6|A0A2I4G6Q6_9ROSI (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like isoform X3 OS=Juglans regia OX=51240 GN=LOC109005226 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 5.5e-36 Identity = 109/268 (40.67%), Postives = 157/268 (58.58%), Query Frame = 0
BLAST of CsaV3_4G036590 vs. TrEMBL
Match: tr|A0A2I4G6S0|A0A2I4G6S0_9ROSI (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109005226 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 5.5e-36 Identity = 108/271 (39.85%), Postives = 154/271 (56.83%), Query Frame = 0
BLAST of CsaV3_4G036590 vs. TrEMBL
Match: tr|A0A2I4G6S3|A0A2I4G6S3_9ROSI (protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION-like isoform X2 OS=Juglans regia OX=51240 GN=LOC109005226 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 2.7e-35 Identity = 109/268 (40.67%), Postives = 155/268 (57.84%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |