CsaV3_4G032130 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGCTTTGCATCAATTCCCACACATTCCTTGGCTCGGAACATCACTCTAGAACCAAAATGGGATAGGAGAAAATACTCGTTGATCTTTGTAAAACGTGAAATGACACCTCCTTCACTTGCTAGATGTATGCTTATCTCAAAGATACTCCAAAACTCTACGTAAATAACATAGTGGCTGTTTGGGCCCTATGTTATCACCGTGGGCTTAGGCAATTTCTTCTTCAATCCTTCATAGTCCTCCTCATTCTCCTTCCCGTAATCCCCTCTCTTCTTCCCTCCCTCTTCGTTTTTGTTTCCCTCTTCTTCCTTCTCTCATGGCTAACCCTCTTCTTCCCTCCCCGTTCGTTTTTGTTTCTCTCTTATTCCTTCTCTCATGGCTAACCCACTTCGCCAAAGTAACACGATACCAAGATTTGTGCAAGCACAACCCTACAAAATGGGCTTGAGCAGGGGTGTCGGAATAGAGGCAAAAAAAATCGCAGGATTCCTGGGGAGGTTGATGAACAAAAAGTGGATGAAGGAGAGAAATAGGGTCGTCTAAGCTGTGTGGAGGTGTTTGAAGCCGCCATTGATGAGCTTCACATGTCGTTTGGGGTTCTTAGAAGATTGAGTAGGAGGAATTTTGACACACAAATGGGGTATCTAACGACGTGGGTCAGCATTGCGCTAACGAATGAAGATATTTGCGTTAAAGGATTTGAAGGTGGAAGGGAAAAAATAGTGAATTTGCTAAGAAATGGAATGGTGAAAGTTGGTTATATTATGAGTAATGCACTTGCTTTGGTTAATAAATTGGTTGTCTCTATTTTTGAAATTGGACGGAGATTTGGAATTTCTCTTGAATTTGATGTGGAGATTGGATGTACATGTTATAAGATTATATAACTTGTAATTGTACTAATTGAAAGAATTAAAACTACATACTATTTTTTAAATGAAAATTACGTTTGGGGTTCTTTTTTTTTGTTGTGTGTGTTGAAATGAAATTATGACTGTTAATTGGGCTAGCTCCTAAAGGAGTCCCTCTAAATTTCATGTGTATCTTCCGTGGAATTCAGATTATAATGATGATGTTTTGGACAAGATAGGTTTCTTCTTTGTTGCATATGGAGATTGATCCTCTTTTATTTGTTTATGGAGATGTTCCACTGTTGTTTCATGTGCTCCATAAACTGTATCATTAAGTATTAATGCACTAATGGTCATGCCAAATATGTCAAATGTTTCATATTTCTTTTTATGATGCTTTACCCTAGTGGATTTGGGATGATCTCGATGTTGAATAGATTTCAAATCACTTTTGTTTGTTTGCTTACAAAAATTTGAAAATTTGAATTTTAGTTTAAGATTTCAAATCTTG ATGTCGTTTGGGGTTCTTAGAAGATTGAGTAGGAGGAATTTTGACACACAAATGGGGTATCTAACGACGTGGGTCAGCATTGCGCTAACGAATGAAGATATTTGCGTTAAAGGATTTGAAGGTGGAAGGGAAAAAATAGTGAATTTGCTAAGAAATGGAATGGTGAAAGTTGGTTATATTATGAGTAATGCACTTGCTTTGGTTAATAAATTGGTTGTCTCTATTTTTGAAATTGGACGGAGATTTGGAATTTCTCTTGAATTTGATGTGGAGATTGGATGTACATGTTATAAGATTATATAA ATGTCGTTTGGGGTTCTTAGAAGATTGAGTAGGAGGAATTTTGACACACAAATGGGGTATCTAACGACGTGGGTCAGCATTGCGCTAACGAATGAAGATATTTGCGTTAAAGGATTTGAAGGTGGAAGGGAAAAAATAGTGAATTTGCTAAGAAATGGAATGGTGAAAGTTGGTTATATTATGAGTAATGCACTTGCTTTGGTTAATAAATTGGTTGTCTCTATTTTTGAAATTGGACGGAGATTTGGAATTTCTCTTGAATTTGATGTGGAGATTGGATGTACATGTTATAAGATTATATAA MSFGVLRRLSRRNFDTQMGYLTTWVSIALTNEDICVKGFEGGREKIVNLLRNGMVKVGYIMSNALALVNKLVVSIFEIGRRFGISLEFDVEIGCTCYKII
BLAST of CsaV3_4G032130 vs. NCBI nr
Match: KGN54954.1 (hypothetical protein Csa_4G615740 [Cucumis sativus]) HSP 1 Score: 185.3 bits (469), Expect = 1.0e-43 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. NCBI nr
Match: XP_008451567.1 (PREDICTED: 21 kDa protein [Cucumis melo]) HSP 1 Score: 115.5 bits (288), Expect = 1.0e-22 Identity = 59/76 (77.63%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. NCBI nr
Match: XP_011659361.1 (PREDICTED: 21 kDa protein [Cucumis sativus] >KGN44941.1 hypothetical protein Csa_7G397050 [Cucumis sativus]) HSP 1 Score: 113.6 bits (283), Expect = 3.9e-22 Identity = 58/76 (76.32%), Postives = 62/76 (81.58%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. NCBI nr
Match: XP_022146187.1 (pectinesterase inhibitor 6-like [Momordica charantia]) HSP 1 Score: 106.3 bits (264), Expect = 6.2e-20 Identity = 54/76 (71.05%), Postives = 61/76 (80.26%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. NCBI nr
Match: XP_022960074.1 (pectinesterase inhibitor 6-like [Cucurbita moschata]) HSP 1 Score: 105.9 bits (263), Expect = 8.1e-20 Identity = 55/78 (70.51%), Postives = 59/78 (75.64%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. TAIR10
Match: AT2G47670.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 56.6 bits (135), Expect = 1.0e-08 Identity = 31/72 (43.06%), Postives = 42/72 (58.33%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. TAIR10
Match: AT3G62820.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 54.7 bits (130), Expect = 3.9e-08 Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. TAIR10
Match: AT1G62760.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 52.8 bits (125), Expect = 1.5e-07 Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. TAIR10
Match: AT5G20740.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 51.2 bits (121), Expect = 4.3e-07 Identity = 30/76 (39.47%), Postives = 44/76 (57.89%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. TAIR10
Match: AT3G05620.1 (Plant invertase/pectin methylesterase inhibitor superfamily) HSP 1 Score: 48.5 bits (114), Expect = 2.8e-06 Identity = 22/62 (35.48%), Postives = 37/62 (59.68%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. Swiss-Prot
Match: sp|O22244|PMEI6_ARATH (Pectinesterase inhibitor 6 OS=Arabidopsis thaliana OX=3702 GN=PMEI6 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.8e-07 Identity = 31/72 (43.06%), Postives = 42/72 (58.33%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. Swiss-Prot
Match: sp|Q9SI74|PMI10_ARATH (Pectinesterase inhibitor 10 OS=Arabidopsis thaliana OX=3702 GN=PMEI10 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.7e-06 Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. Swiss-Prot
Match: sp|Q84WE4|PMEI3_ARATH (Pectinesterase inhibitor 3 OS=Arabidopsis thaliana OX=3702 GN=PMEI3 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 7.7e-06 Identity = 30/76 (39.47%), Postives = 44/76 (57.89%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. Swiss-Prot
Match: sp|Q9M9W7|PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana OX=3702 GN=PME22 PE=3 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.0e-05 Identity = 22/62 (35.48%), Postives = 37/62 (59.68%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. Swiss-Prot
Match: sp|Q9SI72|PMEI9_ARATH (Pectinesterase inhibitor 9 OS=Arabidopsis thaliana OX=3702 GN=PMEI9 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.1e-04 Identity = 28/66 (42.42%), Postives = 40/66 (60.61%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. TrEMBL
Match: tr|A0A0A0L1N4|A0A0A0L1N4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G615740 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 6.9e-44 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. TrEMBL
Match: tr|A0A1S3BSW5|A0A1S3BSW5_CUCME (21 kDa protein OS=Cucumis melo OX=3656 GN=LOC103492810 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 6.7e-23 Identity = 59/76 (77.63%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. TrEMBL
Match: tr|A0A0A0KAX0|A0A0A0KAX0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397050 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.6e-22 Identity = 58/76 (76.32%), Postives = 62/76 (81.58%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. TrEMBL
Match: tr|G7LBZ5|G7LBZ5_MEDTR (Plant invertase/pectin methylesterase inhibitor OS=Medicago truncatula OX=3880 GN=11433583 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.4e-15 Identity = 45/70 (64.29%), Postives = 52/70 (74.29%), Query Frame = 0
BLAST of CsaV3_4G032130 vs. TrEMBL
Match: tr|I3SDE4|I3SDE4_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.8e-15 Identity = 44/73 (60.27%), Postives = 54/73 (73.97%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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