CsaV3_4G027820 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGAAGATTTGTTGTGTTTGAGTACGTTTTGTTTGCTATAATATATATATATTAGGAAATATATATATATATTATGTTAGGAAACATATTTGGAGATTTTAAAATCAGAATTCAGTTTCATATTTTTGAAAATAATAATAACAATAATGATAGCCAAGAACAAATTTTAAAAACTATTCTCACTACTCGCCTGCAGATGCGACGGATCATTGGGAGCCGTCACCGATCTCCTTTACTCCAACCTCCGACTTCCATTATCTTGCTTTTTTTTTTCTTTTTTTTGATGAAGAGATAAAAAACCATCCCATTTTCCGGATAACTATGAGCGATATAATGTCACCGGCGGTCGATTCCGATTCGAAATTGGGATCAGATCCAACCAGTCGAATTGCCGAAGTGAAGGAATGGTTGGGATCCGAATTCGGCAGGGCCGGGAAAGAAGTTCCCGATTTTGAGTACACCCCTTTTAGCGTCTCTCATTTGCACAATCTCTGCAATCTCTCCCAAGCAAAGACACGCGCCGCCGAGATTCTGGCCAAAGACTTCCGCCTCAAGGCCGCCGAGTACCGCGCCCAAGGTAAAACGCCTATATCTCTCAGCTTTCGGTTGTTGAAATTTGTTACGGGATTTTGTTTCTTTTGATTGATTTTGTTTTATGGGACTTTTAGCGGCGAGAATCAGAGAGATTTTGGAGAGCGTAGGGATGGCACAGGAGAATTTATCCTCCAATGTGGTTTCATCGGCGCAAGTTCTTGCTAATGTGGCGAATTTGTTGAACATTAGGGATACTGAGCTCAGTAGGTAATGAAATTGAAATCCCTAAATTTCTTAATGAATTTGTGGTTGGAATTTTGGGTGAGTGTTTGTTTGATTGAGAGAATGTTAAACAATGTAGCTTTCTGGTTGCAATGGGGGATATTTCTTTGAGGAAAATAAGTGTTGAGGAGAAGAGGGCAAAGGTGGAGAAGGATTCTAAGGTTCTACTTGATCATACTCGAAAGGCAATAGCTAGATTAACATATTTGAAGAGGTTAGTTTTTTGGAGAAATTTCTTTCTTACCACATTTCTGTGTGTGCTTACAATTTAGTGTTGGTTTCTTTATGTTATCACTTTGACATGAACGAACAACTTGGTAGAACATTAGCACAACTAGAAGACGATGTAGCTCCATGTGAAGCTCAAATGGATAATTGGAAGACAAATTTAGCTGTAATGGCTGCCAAGGAGAGGCAGTATATGCAGCAATGTGCCAACTACAAGGTACTTGTGCTCTTTTTGTTTTGCTACTTGTTAAAATCAACATGTAGACTGGTGTGCATCTGGATACGAGTATTTTTAGCATAGAACCCCAATGGGTGGCCTCATGATTCAGGAATACGGGATGTTTGAAGATGTTCTCCAAGTTTTTAGATGAATTGAAACCCTTCGATGGAACAAAAAATTTAGGTCTTGTTTGATAACTATTTTGCTTTAAATTAAGTTTGTAAACACCCTTTCCACCTCTAAATTTCTTGATCTGTTGTCTATTTTCTACAAACGTTATAAAAGACCAAGTGTAGTTTTGAAAACTGAAAAATGTACCCTTCATAGTTGATTAAGAAAATTGTTTTGAAGCATAAATATATGTTGTATTTTATTGATATGTTGTATCTTATTGATAAATTCTTGTTTCCTATAAAAATAATAATAATAATAATGTTGTATCTTATTGATATTTATGCTAAAGTTGTTGAATCTGAACTTTGTTGTTGAATTATGTTGACATGGAACAATAAGAAAAATCACATTTCTTCATAATGATATCATCATAGATCTTTAGGAAGTTCTCTAAAGACTTGTCTCCTTCAAAATGTGATTTGATGAAGTCTTTTATTTGACAGGCAATGCTTAATCGTGTGGGTTACTCACCAGATATTAGTCATGGGATACTGGTTGAAATGGCTGAGCATAGGAAAGAGTTGGAGAAGAAAACAAAGCCCATGCTTGATACTTTAAGGAGCTACCAAGATCTTCCCCCTGTAATTCATTCCCCATTACTCATACACTGCCAATTTGTTTTGTGTATAAATAGTTCTTGAACCTTTAACTTCATCAAAAGAGAGTAAAAGGATTGAACTTTGAACTTTTGTCTTAATTACAGGATAAAGCTTTGGCTGCTTTAGCAATTGAGGACAAGAAAAGACAGTATGCTGCAGCTGAAAAGTATCTTGAAGATGTTCTTCATTCTGCACTCACCACGACACAGTAGCTTCTCTTCGACAGTCTAACGTTATCGGTAAATTGTTTTGTACGTTTGTGTATCAATGTTAGTACAAGATAGTGTTAAAGAGAGGTGCATAGTCAATATTCAGGATTAAGACTTTGGGAACTGAGTATATTTTGTAACATTATGATGACATTGGGGGCTTTTGAGTTCCTTAATGAATATAGTTTATTTTGTTATTGAGAATATGATAGACCACCAACTAAAAGTGATCTTATTCAATTCGAAACAGCAGAAGCATTACAAGAACGAATTGACAAATTGTCAATTCTTAAAC ATGAGCGATATAATGTCACCGGCGGTCGATTCCGATTCGAAATTGGGATCAGATCCAACCAGTCGAATTGCCGAAGTGAAGGAATGGTTGGGATCCGAATTCGGCAGGGCCGGGAAAGAAGTTCCCGATTTTGAGTACACCCCTTTTAGCGTCTCTCATTTGCACAATCTCTGCAATCTCTCCCAAGCAAAGACACGCGCCGCCGAGATTCTGGCCAAAGACTTCCGCCTCAAGGCCGCCGAGTACCGCGCCCAAGCGGCGAGAATCAGAGAGATTTTGGAGAGCGTAGGGATGGCACAGGAGAATTTATCCTCCAATGTGGTTTCATCGGCGCAAGTTCTTGCTAATGTGGCGAATTTGTTGAACATTAGGGATACTGAGCTCAGTAGCTTTCTGGTTGCAATGGGGGATATTTCTTTGAGGAAAATAAGTGTTGAGGAGAAGAGGGCAAAGGTGGAGAAGGATTCTAAGGTTCTACTTGATCATACTCGAAAGGCAATAGCTAGATTAACATATTTGAAGAGAACATTAGCACAACTAGAAGACGATGTAGCTCCATGTGAAGCTCAAATGGATAATTGGAAGACAAATTTAGCTGTAATGGCTGCCAAGGAGAGGCAGTATATGCAGCAATGTGCCAACTACAAGGCAATGCTTAATCGTGTGGGTTACTCACCAGATATTAGTCATGGGATACTGGTTGAAATGGCTGAGCATAGGAAAGAGTTGGAGAAGAAAACAAAGCCCATGCTTGATACTTTAAGGAGCTACCAAGATCTTCCCCCTGATAAAGCTTTGGCTGCTTTAGCAATTGAGGACAAGAAAAGACAGTATGCTGCAGCTGAAAAGTATCTTGAAGATGTTCTTCATTCTGCACTCACCACGACACAGTAG ATGAGCGATATAATGTCACCGGCGGTCGATTCCGATTCGAAATTGGGATCAGATCCAACCAGTCGAATTGCCGAAGTGAAGGAATGGTTGGGATCCGAATTCGGCAGGGCCGGGAAAGAAGTTCCCGATTTTGAGTACACCCCTTTTAGCGTCTCTCATTTGCACAATCTCTGCAATCTCTCCCAAGCAAAGACACGCGCCGCCGAGATTCTGGCCAAAGACTTCCGCCTCAAGGCCGCCGAGTACCGCGCCCAAGCGGCGAGAATCAGAGAGATTTTGGAGAGCGTAGGGATGGCACAGGAGAATTTATCCTCCAATGTGGTTTCATCGGCGCAAGTTCTTGCTAATGTGGCGAATTTGTTGAACATTAGGGATACTGAGCTCAGTAGCTTTCTGGTTGCAATGGGGGATATTTCTTTGAGGAAAATAAGTGTTGAGGAGAAGAGGGCAAAGGTGGAGAAGGATTCTAAGGTTCTACTTGATCATACTCGAAAGGCAATAGCTAGATTAACATATTTGAAGAGAACATTAGCACAACTAGAAGACGATGTAGCTCCATGTGAAGCTCAAATGGATAATTGGAAGACAAATTTAGCTGTAATGGCTGCCAAGGAGAGGCAGTATATGCAGCAATGTGCCAACTACAAGGCAATGCTTAATCGTGTGGGTTACTCACCAGATATTAGTCATGGGATACTGGTTGAAATGGCTGAGCATAGGAAAGAGTTGGAGAAGAAAACAAAGCCCATGCTTGATACTTTAAGGAGCTACCAAGATCTTCCCCCTGATAAAGCTTTGGCTGCTTTAGCAATTGAGGACAAGAAAAGACAGTATGCTGCAGCTGAAAAGTATCTTGAAGATGTTCTTCATTCTGCACTCACCACGACACAGTAG MSDIMSPAVDSDSKLGSDPTSRIAEVKEWLGSEFGRAGKEVPDFEYTPFSVSHLHNLCNLSQAKTRAAEILAKDFRLKAAEYRAQAARIREILESVGMAQENLSSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDISLRKISVEEKRAKVEKDSKVLLDHTRKAIARLTYLKRTLAQLEDDVAPCEAQMDNWKTNLAVMAAKERQYMQQCANYKAMLNRVGYSPDISHGILVEMAEHRKELEKKTKPMLDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLHSALTTTQ
BLAST of CsaV3_4G027820 vs. NCBI nr
Match: XP_011653766.1 (PREDICTED: uncharacterized protein LOC101220993 [Cucumis sativus] >KGN54519.1 hypothetical protein Csa_4G351120 [Cucumis sativus]) HSP 1 Score: 565.1 bits (1455), Expect = 1.4e-157 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. NCBI nr
Match: XP_008455693.1 (PREDICTED: AUGMIN subunit 1 [Cucumis melo]) HSP 1 Score: 559.3 bits (1440), Expect = 7.9e-156 Identity = 293/297 (98.65%), Postives = 295/297 (99.33%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. NCBI nr
Match: XP_004136688.2 (PREDICTED: uncharacterized protein LOC101211882 [Cucumis sativus] >KGN59535.1 hypothetical protein Csa_3G824800 [Cucumis sativus]) HSP 1 Score: 558.9 bits (1439), Expect = 1.0e-155 Identity = 293/297 (98.65%), Postives = 294/297 (98.99%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. NCBI nr
Match: XP_023543590.1 (AUGMIN subunit 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 541.2 bits (1393), Expect = 2.2e-150 Identity = 284/296 (95.95%), Postives = 290/296 (97.97%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. NCBI nr
Match: XP_022932875.1 (AUGMIN subunit 1 [Cucurbita moschata]) HSP 1 Score: 538.9 bits (1387), Expect = 1.1e-149 Identity = 283/296 (95.61%), Postives = 289/296 (97.64%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. TAIR10
Match: AT2G41350.2 (unknown protein) HSP 1 Score: 405.6 bits (1041), Expect = 2.6e-113 Identity = 222/297 (74.75%), Postives = 251/297 (84.51%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. TAIR10
Match: AT2G21980.1 (unknown protein) HSP 1 Score: 89.0 bits (219), Expect = 5.5e-18 Identity = 46/58 (79.31%), Postives = 48/58 (82.76%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. Swiss-Prot
Match: sp|F4IK01|AUG1_ARATH (AUGMIN subunit 1 OS=Arabidopsis thaliana OX=3702 GN=AUG1 PE=1 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 4.8e-112 Identity = 222/297 (74.75%), Postives = 251/297 (84.51%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. Swiss-Prot
Match: sp|Q8BHX1|HAUS1_MOUSE (HAUS augmin-like complex subunit 1 OS=Mus musculus OX=10090 GN=Haus1 PE=1 SV=2) HSP 1 Score: 99.0 bits (245), Expect = 9.5e-20 Identity = 72/268 (26.87%), Postives = 133/268 (49.63%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. Swiss-Prot
Match: sp|Q96CS2|HAUS1_HUMAN (HAUS augmin-like complex subunit 1 OS=Homo sapiens OX=9606 GN=HAUS1 PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.2e-19 Identity = 71/265 (26.79%), Postives = 133/265 (50.19%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. Swiss-Prot
Match: sp|Q2TBK4|HAUS1_BOVIN (HAUS augmin-like complex subunit 1 OS=Bos taurus OX=9913 GN=HAUS1 PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.1e-19 Identity = 70/263 (26.62%), Postives = 130/263 (49.43%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. Swiss-Prot
Match: sp|Q9R0A8|HAUS1_RAT (HAUS augmin-like complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Haus1 PE=2 SV=2) HSP 1 Score: 95.1 bits (235), Expect = 1.4e-18 Identity = 69/265 (26.04%), Postives = 132/265 (49.81%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. TrEMBL
Match: tr|A0A0A0L0G7|A0A0A0L0G7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G351120 PE=4 SV=1) HSP 1 Score: 565.1 bits (1455), Expect = 9.5e-158 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. TrEMBL
Match: tr|A0A1S3C262|A0A1S3C262_CUCME (AUGMIN subunit 1 OS=Cucumis melo OX=3656 GN=LOC103495806 PE=4 SV=1) HSP 1 Score: 559.3 bits (1440), Expect = 5.2e-156 Identity = 293/297 (98.65%), Postives = 295/297 (99.33%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. TrEMBL
Match: tr|A0A0A0LC18|A0A0A0LC18_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G824800 PE=4 SV=1) HSP 1 Score: 558.9 bits (1439), Expect = 6.8e-156 Identity = 293/297 (98.65%), Postives = 294/297 (98.99%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. TrEMBL
Match: tr|A0A2I4FJF5|A0A2I4FJF5_9ROSI (AUGMIN subunit 1 isoform X1 OS=Juglans regia OX=51240 GN=LOC108999346 PE=4 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 1.3e-125 Identity = 238/293 (81.23%), Postives = 270/293 (92.15%), Query Frame = 0
BLAST of CsaV3_4G027820 vs. TrEMBL
Match: tr|A0A2P5BU57|A0A2P5BU57_PARAD (HAUS augmin-like complex subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_210050 PE=4 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 1.3e-125 Identity = 236/282 (83.69%), Postives = 262/282 (92.91%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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