CsaV3_4G015990 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGGAATAAAATAAAATGTAACGAGAAGAAAAGAAGAGGAAAAAAGAAAAGGCTAATAAGCAAGGCAAGGAAGGAGAATAGTGTGCTTCCAGTGGAAAACACTTCTTTGCTTGAGGTTGATTTTAAAGGTTTAGCAAAAAGGACCCAAGGAAGTCTAACTAAAGAAATTTGGGACCTTGGAAGAAGAAATCAAGAAGTAGAGTTGGAGATAAAAGTGAATGAGGAAGCGACCAAGGAGTTTGAGAAAGAAAGAGACAGAAATAATTTGTTGGAGGAGGAAGTGTCCATCTGCAATAAGGGAAGACAAAAAATACAAGCAGAAAGCGCTTGTAGGCACACATAG ATGGAAAGGAATAAAATAAAATGTAACGAGAAGAAAAGAAGAGGAAAAAAGAAAAGGCTAATAAGCAAGGCAAGGAAGGAGAATAGTGTGCTTCCAGTGGAAAACACTTCTTTGCTTGAGGTTGATTTTAAAGGTTTAGCAAAAAGGACCCAAGGAAGTCTAACTAAAGAAATTTGGGACCTTGGAAGAAGAAATCAAGAAGTAGAGTTGGAGATAAAAGTGAATGAGGAAGCGACCAAGGAGTTTGAGAAAGAAAGAGACAGAAATAATTTGTTGGAGGAGGAAGTGTCCATCTGCAATAAGGGAAGACAAAAAATACAAGCAGAAAGCGCTTGTAGGCACACATAG ATGGAAAGGAATAAAATAAAATGTAACGAGAAGAAAAGAAGAGGAAAAAAGAAAAGGCTAATAAGCAAGGCAAGGAAGGAGAATAGTGTGCTTCCAGTGGAAAACACTTCTTTGCTTGAGGTTGATTTTAAAGGTTTAGCAAAAAGGACCCAAGGAAGTCTAACTAAAGAAATTTGGGACCTTGGAAGAAGAAATCAAGAAGTAGAGTTGGAGATAAAAGTGAATGAGGAAGCGACCAAGGAGTTTGAGAAAGAAAGAGACAGAAATAATTTGTTGGAGGAGGAAGTGTCCATCTGCAATAAGGGAAGACAAAAAATACAAGCAGAAAGCGCTTGTAGGCACACATAG MERNKIKCNEKKRRGKKKRLISKARKENSVLPVENTSLLEVDFKGLAKRTQGSLTKEIWDLGRRNQEVELEIKVNEEATKEFEKERDRNNLLEEEVSICNKGRQKIQAESACRHT
BLAST of CsaV3_4G015990 vs. NCBI nr
Match: KGN54001.1 (hypothetical protein Csa_4G255430 [Cucumis sativus]) HSP 1 Score: 216.9 bits (551), Expect = 3.7e-53 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of CsaV3_4G015990 vs. NCBI nr
Match: KGN57829.1 (hypothetical protein Csa_3G335350 [Cucumis sativus]) HSP 1 Score: 56.2 bits (134), Expect = 8.4e-05 Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 0
BLAST of CsaV3_4G015990 vs. NCBI nr
Match: KGN65003.1 (hypothetical protein Csa_1G173720 [Cucumis sativus]) HSP 1 Score: 54.3 bits (129), Expect = 3.2e-04 Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of CsaV3_4G015990 vs. NCBI nr
Match: KGN49676.1 (hypothetical protein Csa_5G057130 [Cucumis sativus]) HSP 1 Score: 53.9 bits (128), Expect = 4.2e-04 Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 0
BLAST of CsaV3_4G015990 vs. TrEMBL
Match: tr|A0A0A0L1L9|A0A0A0L1L9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G255430 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 2.5e-53 Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0
BLAST of CsaV3_4G015990 vs. TrEMBL
Match: tr|A0A0A0LA28|A0A0A0LA28_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G335350 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 5.6e-05 Identity = 36/72 (50.00%), Postives = 46/72 (63.89%), Query Frame = 0
BLAST of CsaV3_4G015990 vs. TrEMBL
Match: tr|A0A0A0LTC4|A0A0A0LTC4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173720 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.1e-04 Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of CsaV3_4G015990 vs. TrEMBL
Match: tr|A0A0A0KPM1|A0A0A0KPM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G057130 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 2.8e-04 Identity = 27/42 (64.29%), Postives = 31/42 (73.81%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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