CsaV3_4G014860 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCCCGTGGTAAACTTAGACGGTTAAGACAAACCAGAAGTATTCTCGAGTACGTGAAAGAATTCACAACCCTCATGTTGGAAATTGATGACATGTTCGACAAAGACGCACTCTTTCATTTTTGAGATGGTCTCAAAGACTGGGCAAGACAGAACTCGACCGACGGAATGTGCAAAATCTCGATGATGCCATTGTCGCCATAGAGACACTCACGAATTATCGATCCAAGGAGAAGAGAATCAACGAAAATGGAGGAGAAGTGTCAGAGTCAAGAAGGGAACATGTTCACAAGACGAGGAAAAGCCACAAGGTTAGTGGAAGGCACGGGAAAGCCACGGAAGTGAGGAAAGGTACATCTTTCAAAACCCCTAGCACTTGTTTTCTCTGCAATGGTCCACATTGGGCAACTGATTGTCCACAAAAGAAAATGTTGAGTGCATTGGTGGCAAAAATCCACGAGGGAGAGGAGGAAGCACCCGTACCATAG ATGGAGGCCCGTGGTAAACTTAGACGGTTAAGACAAACCAGAAGTATTCTCGAGTACGTGAAAGAATTCACAACCCTCATGTTGGAAATTGATGACATACTGGGCAAGACAGAACTCGACCGACGGAATGTGCAAAATCTCGATGATGCCATTGTCGCCATAGAGACACTCACGAATTATCGATCCAAGGAGAAGAGAATCAACGAAAATGGAGGAGAAGTGTCAGAGTCAAGAAGGGAACATGTTCACAAGACGAGGAAAAGCCACAAGGTTAGTGGAAGGCACGGGAAAGCCACGGAAGTGAGGAAAGGTACATCTTTCAAAACCCCTAGCACTTGTTTTCTCTGCAATGGTCCACATTGGGCAACTGATTGTCCACAAAAGAAAATGTTGAGTGCATTGGTGGCAAAAATCCACGAGGGAGAGGAGGAAGCACCCGTACCATAG ATGGAGGCCCGTGGTAAACTTAGACGGTTAAGACAAACCAGAAGTATTCTCGAGTACGTGAAAGAATTCACAACCCTCATGTTGGAAATTGATGACATACTGGGCAAGACAGAACTCGACCGACGGAATGTGCAAAATCTCGATGATGCCATTGTCGCCATAGAGACACTCACGAATTATCGATCCAAGGAGAAGAGAATCAACGAAAATGGAGGAGAAGTGTCAGAGTCAAGAAGGGAACATGTTCACAAGACGAGGAAAAGCCACAAGGTTAGTGGAAGGCACGGGAAAGCCACGGAAGTGAGGAAAGGTACATCTTTCAAAACCCCTAGCACTTGTTTTCTCTGCAATGGTCCACATTGGGCAACTGATTGTCCACAAAAGAAAATGTTGAGTGCATTGGTGGCAAAAATCCACGAGGGAGAGGAGGAAGCACCCGTACCATAG MEARGKLRRLRQTRSILEYVKEFTTLMLEIDDILGKTELDRRNVQNLDDAIVAIETLTNYRSKEKRINENGGEVSESRREHVHKTRKSHKVSGRHGKATEVRKGTSFKTPSTCFLCNGPHWATDCPQKKMLSALVAKIHEGEEEAPVP
BLAST of CsaV3_4G014860 vs. NCBI nr
Match: XP_008455798.1 (PREDICTED: uncharacterized protein LOC103495894 [Cucumis melo]) HSP 1 Score: 122.9 bits (307), Expect = 9.4e-25 Identity = 75/169 (44.38%), Postives = 97/169 (57.40%), Query Frame = 0
BLAST of CsaV3_4G014860 vs. NCBI nr
Match: XP_008446938.1 (PREDICTED: uncharacterized protein LOC103489499 [Cucumis melo]) HSP 1 Score: 119.8 bits (299), Expect = 8.0e-24 Identity = 75/169 (44.38%), Postives = 96/169 (56.80%), Query Frame = 0
BLAST of CsaV3_4G014860 vs. NCBI nr
Match: XP_008442289.1 (PREDICTED: uncharacterized protein LOC103486198 [Cucumis melo]) HSP 1 Score: 114.0 bits (284), Expect = 4.4e-22 Identity = 71/169 (42.01%), Postives = 93/169 (55.03%), Query Frame = 0
BLAST of CsaV3_4G014860 vs. NCBI nr
Match: XP_012089545.2 (LOW QUALITY PROTEIN: uncharacterized protein LOC105647934, partial [Jatropha curcas]) HSP 1 Score: 111.3 bits (277), Expect = 2.8e-21 Identity = 67/155 (43.23%), Postives = 93/155 (60.00%), Query Frame = 0
BLAST of CsaV3_4G014860 vs. NCBI nr
Match: XP_015389228.1 (uncharacterized protein LOC107178484 [Citrus sinensis]) HSP 1 Score: 108.6 bits (270), Expect = 1.8e-20 Identity = 66/156 (42.31%), Postives = 90/156 (57.69%), Query Frame = 0
BLAST of CsaV3_4G014860 vs. TrEMBL
Match: tr|A0A1S3C1B3|A0A1S3C1B3_CUCME (uncharacterized protein LOC103495894 OS=Cucumis melo OX=3656 GN=LOC103495894 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 6.2e-25 Identity = 75/169 (44.38%), Postives = 97/169 (57.40%), Query Frame = 0
BLAST of CsaV3_4G014860 vs. TrEMBL
Match: tr|A0A1S3BG92|A0A1S3BG92_CUCME (uncharacterized protein LOC103489499 OS=Cucumis melo OX=3656 GN=LOC103489499 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 5.3e-24 Identity = 75/169 (44.38%), Postives = 96/169 (56.80%), Query Frame = 0
BLAST of CsaV3_4G014860 vs. TrEMBL
Match: tr|A0A1S3B5C5|A0A1S3B5C5_CUCME (uncharacterized protein LOC103486198 OS=Cucumis melo OX=3656 GN=LOC103486198 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.9e-22 Identity = 71/169 (42.01%), Postives = 93/169 (55.03%), Query Frame = 0
BLAST of CsaV3_4G014860 vs. TrEMBL
Match: tr|A0A2U1NEZ9|A0A2U1NEZ9_ARTAN (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA274570 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 7.4e-18 Identity = 58/154 (37.66%), Postives = 88/154 (57.14%), Query Frame = 0
BLAST of CsaV3_4G014860 vs. TrEMBL
Match: tr|A0A2U1PL38|A0A2U1PL38_ARTAN (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA095360 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 7.4e-18 Identity = 58/154 (37.66%), Postives = 88/154 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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