CsaV3_4G006750.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G006750.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	UvrABC system protein C
Location	chr4 : 4537558 .. 4538385 (+)
Sequence length	612

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Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTCCGCCATTAACGAGGTGGAAGAAAAAGCTTTGAAAATCGCAATGGGAAACTGTTCTCTCAAAGGAATGGCGGTGGATTGCGAGAAGCCCATCAGAATCTTAACGGATTCCGGCCATATAATCAACTTCCACGGCCCTAAACAAGTTCATCAAATCCTCAACAACTATCCTCCCGGTATCTATGGCGTTTTCCGGCGACCCAATCTATCTTCTCCCTTACCCGTCTCCGAGCCCCTTGACGCCGGAAAATCCTACTTTCTTCTCCCGCTTTCCCAATCCACTAACGACGGAGAGTCACCGCTGCCGGTGCCGCCGCCGTCGAAGGATGTGGGAAGTGAGTCGGGTCTGGAAGTGCTCCCGGCGGGTGGCAACGGCGTTTGGAGGGTGAAATTGGTGATCGATACGAAGCAGTTGGGGGAAATTTTGGCGGAGGAAGGGAATACGGAGGCGTTGATTGAGAGGATGAGAGCAGCAGCGGCGACGGCGGCGGTGCAAAGTCCACGGCGGGGGAAGATCGGAGGGTGGAAGCCGATGTGGGGGAATTGGTTCAAATTTTTTCCAATTGATGTTGGAAATAGTAATAAAGCACAAATGAAAGTATTTAATTATTGAAATGGGTGTTCATATTCAACATAAACCCTAAGTATTTTCTTTCTAATTTGATTATTAGGAGAAAGTTTGTGTAAAATGTAATTTTTGAGCTTGTTTGGTTGTATATAAGCTTGTATGTAAGGTGTGAGTTTTTAGGGCTCTCTTAATAGAGTTATAAAGTTATTATTATGTTGTGCTCTCAATTTTTTTATTTAATTGAAGACTTTGTGA

mRNA sequence

ATGAGCTCCGCCATTAACGAGGTGGAAGAAAAAGCTTTGAAAATCGCAATGGGAAACTGTTCTCTCAAAGGAATGGCGGTGGATTGCGAGAAGCCCATCAGAATCTTAACGGATTCCGGCCATATAATCAACTTCCACGGCCCTAAACAAGTTCATCAAATCCTCAACAACTATCCTCCCGGTATCTATGGCGTTTTCCGGCGACCCAATCTATCTTCTCCCTTACCCGTCTCCGAGCCCCTTGACGCCGGAAAATCCTACTTTCTTCTCCCGCTTTCCCAATCCACTAACGACGGAGAGTCACCGCTGCCGGTGCCGCCGCCGTCGAAGGATGTGGGAAGTGAGTCGGGTCTGGAAGTGCTCCCGGCGGGTGGCAACGGCGTTTGGAGGGTGAAATTGGTGATCGATACGAAGCAGTTGGGGGAAATTTTGGCGGAGGAAGGGAATACGGAGGCGTTGATTGAGAGGATGAGAGCAGCAGCGGCGACGGCGGCGGTGCAAAGTCCACGGCGGGGGAAGATCGGAGGGTGGAAGCCGATGTGGGGGAATTGGTTCAAATTTTTTCCAATTGATGTTGGAAATAGTAATAAAGCACAAATGAAAACTTTGTGA

Coding sequence (CDS)

ATGAGCTCCGCCATTAACGAGGTGGAAGAAAAAGCTTTGAAAATCGCAATGGGAAACTGTTCTCTCAAAGGAATGGCGGTGGATTGCGAGAAGCCCATCAGAATCTTAACGGATTCCGGCCATATAATCAACTTCCACGGCCCTAAACAAGTTCATCAAATCCTCAACAACTATCCTCCCGGTATCTATGGCGTTTTCCGGCGACCCAATCTATCTTCTCCCTTACCCGTCTCCGAGCCCCTTGACGCCGGAAAATCCTACTTTCTTCTCCCGCTTTCCCAATCCACTAACGACGGAGAGTCACCGCTGCCGGTGCCGCCGCCGTCGAAGGATGTGGGAAGTGAGTCGGGTCTGGAAGTGCTCCCGGCGGGTGGCAACGGCGTTTGGAGGGTGAAATTGGTGATCGATACGAAGCAGTTGGGGGAAATTTTGGCGGAGGAAGGGAATACGGAGGCGTTGATTGAGAGGATGAGAGCAGCAGCGGCGACGGCGGCGGTGCAAAGTCCACGGCGGGGGAAGATCGGAGGGTGGAAGCCGATGTGGGGGAATTGGTTCAAATTTTTTCCAATTGATGTTGGAAATAGTAATAAAGCACAAATGAAAACTTTGTGA

Protein sequence

MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLPVSEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSNKAQMKTL

Homology

[Close]

BLAST of CsaV3_4G006750.1 vs. NCBI nr
Match: XP_011653223.1 (PREDICTED: uncharacterized protein LOC105435189 [Cucumis sativus] >KGN53422.1 hypothetical protein Csa_4G052720 [Cucumis sativus])

HSP 1 Score: 413.3 bits (1061), Expect = 4.8e-112
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPP 60
           MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPP
Sbjct: 1   MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPP 60

Query: 61  GIYGVFRRPNLSSPLPVSEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSESGLEV 120
           GIYGVFRRPNLSSPLPVSEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSESGLEV
Sbjct: 61  GIYGVFRRPNLSSPLPVSEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSESGLEV 120

Query: 121 LPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPM 180
           LPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPM
Sbjct: 121 LPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPM 180

Query: 181 WGNWFKFFPIDVGNSNKAQMK 202
           WGNWFKFFPIDVGNSNKAQMK
Sbjct: 181 WGNWFKFFPIDVGNSNKAQMK 201

[Close]

BLAST of CsaV3_4G006750.1 vs. NCBI nr
Match: XP_008451927.1 (PREDICTED: uncharacterized protein LOC103493080 [Cucumis melo])

HSP 1 Score: 344.4 bits (882), Expect = 2.7e-91
Identity = 168/185 (90.81%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 17  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP 76
           MGNCSLKGMAVDC KPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP
Sbjct: 1   MGNCSLKGMAVDCVKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP 60

Query: 77  VSEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVID 136
            SEPLDAGKSYFLLPLSQ TND ES  P P PSKD+GSESGLEVLPA GNGVWRVKLVID
Sbjct: 61  FSEPLDAGKSYFLLPLSQPTNDTESS-PPPLPSKDLGSESGLEVLPASGNGVWRVKLVID 120

Query: 137 TKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSN 196
           TKQLGEILAEEGNTEALIER+RAAAATAAVQSPRRGKI GWKPMWGNW KFFP+D GN+N
Sbjct: 121 TKQLGEILAEEGNTEALIERIRAAAATAAVQSPRRGKIVGWKPMWGNWLKFFPMDFGNNN 180

Query: 197 KAQMK 202
           KAQ+K
Sbjct: 181 KAQIK 184

[Close]

BLAST of CsaV3_4G006750.1 vs. NCBI nr
Match: XP_022985422.1 (uncharacterized protein LOC111483432 [Cucurbita maxima])

HSP 1 Score: 310.1 bits (793), Expect = 5.7e-81
Identity = 150/185 (81.08%), Postives = 163/185 (88.11%), Query Frame = 0


Query: 17  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP 76
           MGNCSLKG+A DCEKPIRILTDSG+IINFHGPKQV QIL NYPPG+YGVFRRPNLSSPLP
Sbjct: 1   MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLP 60

Query: 77  VSEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVID 136
           +SEPLDAGKSYFLLPLS++     S       + D+ + SGLEVLP GG+G+WRVKLVID
Sbjct: 61  ISEPLDAGKSYFLLPLSRAAEKERS-----DAAGDLRTGSGLEVLPTGGDGIWRVKLVID 120

Query: 137 TKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSN 196
           TKQLGEILAE+GNTEALIERMRAAAATAAVQSPRR KIGGWKP WGNW KFFPIDVGN+N
Sbjct: 121 TKQLGEILAEDGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFFPIDVGNNN 180

Query: 197 KAQMK 202
           KAQMK
Sbjct: 181 KAQMK 180

[Close]

BLAST of CsaV3_4G006750.1 vs. NCBI nr
Match: XP_023522023.1 (uncharacterized protein LOC111785895 [Cucurbita pepo subsp. pepo] >XP_023552871.1 uncharacterized protein LOC111810396 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307.8 bits (787), Expect = 2.8e-80
Identity = 149/185 (80.54%), Postives = 162/185 (87.57%), Query Frame = 0


Query: 17  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP 76
           MGNCSLKG+A DCEKPIRILTDSG+IINFHGPKQV QIL NYPPG+YGVFRRPNLSSPLP
Sbjct: 1   MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLP 60

Query: 77  VSEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVID 136
           +SEPLDAGKSYFLLPLS++     S       ++D+ + SGLEVLP GG+G+WRVKLVID
Sbjct: 61  ISEPLDAGKSYFLLPLSRAAEKERS-----DAAEDLRTGSGLEVLPTGGDGIWRVKLVID 120

Query: 137 TKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSN 196
           TKQLGEILAEEGNTEALIERMRAAAATAAVQSPRR KIGGWKP WGNW KF PIDVGN N
Sbjct: 121 TKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNHN 180

Query: 197 KAQMK 202
           KAQ+K
Sbjct: 181 KAQIK 180

[Close]

BLAST of CsaV3_4G006750.1 vs. NCBI nr
Match: XP_022931435.1 (uncharacterized protein LOC111437614 [Cucurbita moschata])

HSP 1 Score: 305.8 bits (782), Expect = 1.1e-79
Identity = 149/185 (80.54%), Postives = 162/185 (87.57%), Query Frame = 0


Query: 17  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP 76
           MGNCSLKG+A DCEKPIRILTDSG+IINFHGPKQV QIL NYPPG+YGVFRRPNLSSPLP
Sbjct: 1   MGNCSLKGVAADCEKPIRILTDSGNIINFHGPKQVDQILKNYPPGVYGVFRRPNLSSPLP 60

Query: 77  VSEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVID 136
           +SE LDAGKSYFLLPLS++     S       ++D+ S SGLEVLP GG+G+WRVKLVID
Sbjct: 61  ISELLDAGKSYFLLPLSRAVEKERS-----DAAEDLRSGSGLEVLPTGGDGIWRVKLVID 120

Query: 137 TKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSN 196
           TKQLGEILAEEGNTEALIERMRAAAATAAVQSPRR KIGGWKP WGNW KF PIDVGN+N
Sbjct: 121 TKQLGEILAEEGNTEALIERMRAAAATAAVQSPRREKIGGWKPTWGNWSKFLPIDVGNNN 180

Query: 197 KAQMK 202
           KAQ+K
Sbjct: 181 KAQIK 180

[Close]

BLAST of CsaV3_4G006750.1 vs. TAIR10
Match: AT3G61920.1 (unknown protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-14
Identity = 56/157 (35.67%), Postives = 75/157 (47.77%), Query Frame = 0


Query: 17  MGNCSLKG------MAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPG-IYGVFRRP 76
           MGNC  KG      +    +  I+++T +G ++  H P     I N +P   I+      
Sbjct: 1   MGNCVFKGNGGSRKLYDKDDSLIKVVTPNGGVMELHPPIFAEFITNEFPGHVIHDSLSLR 60

Query: 77  NLSSPLPVSEPLDAGKSYFLLPLSQSTN-----DGESPLPVPPPSKDVGSESGLEVLPAG 136
           + S PL   E L  G  Y+LLPLS S       D    L   P     G    +  L  G
Sbjct: 61  HSSPPLLHGEELFPGNIYYLLPLSSSAAATAQLDSSDQLST-PYRMSFGKTPIMAALSGG 120

Query: 137 GNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAA 162
           G GVW+V+LVI  +QL EILAE+  TEAL+E +R  A
Sbjct: 121 GCGVWKVRLVISPEQLAEILAEDVETEALVESVRTVA 156

[Close]

BLAST of CsaV3_4G006750.1 vs. TAIR10
Match: AT4G10910.1 (unknown protein)

HSP 1 Score: 59.3 bits (142), Expect = 3.2e-09
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 118 LEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQS 169
           ++V P   NGVW+ K+VI +KQL EILA EGNT ALI+++R AAA A V S
Sbjct: 66  IQVSPQRRNGVWKAKVVIGSKQLEEILAVEGNTHALIDQLRFAAAEALVSS 116

[Close]

BLAST of CsaV3_4G006750.1 vs. TAIR10
Match: AT3G10120.1 (unknown protein)

HSP 1 Score: 47.8 bits (112), Expect = 9.6e-06
Identity = 45/155 (29.03%), Postives = 69/155 (44.52%), Query Frame = 0


Query: 17  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP 76
           MGNC      V  +K I+I+ + G ++ + GP +VH IL  + P  Y +F     +  L 
Sbjct: 1   MGNC-----LVMEKKVIKIMRNDGKVVEYRGPMKVHHILTQFSPH-YSLFDSLTNNCHLH 60

Query: 77  VSEPLDAGKSYFLLPLSQSTND--------GESPLPVPPPSKDVGSESGL----EVLPAG 136
               L  G+ Y+LLP  Q TN          +     P   K+   E  L    +     
Sbjct: 61  PQAKLLCGRLYYLLP--QETNSIKHMKKTMKKVRFANPEVEKEEQEEDRLTDCCDNTKEK 120

Query: 137 GNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRA 160
            NGV RVK+V+  ++L E L + G+   ++ R  A
Sbjct: 121 TNGVVRVKMVVSKQEL-EKLLQGGSVHEMVYRTLA 146

[Close]

BLAST of CsaV3_4G006750.1 vs. TrEMBL
Match: tr|A0A0A0KYF7|A0A0A0KYF7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052720 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 3.2e-112
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPP 60
           MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPP
Sbjct: 1   MSSAINEVEEKALKIAMGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPP 60

Query: 61  GIYGVFRRPNLSSPLPVSEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSESGLEV 120
           GIYGVFRRPNLSSPLPVSEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSESGLEV
Sbjct: 61  GIYGVFRRPNLSSPLPVSEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSESGLEV 120

Query: 121 LPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPM 180
           LPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPM
Sbjct: 121 LPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPM 180

Query: 181 WGNWFKFFPIDVGNSNKAQMK 202
           WGNWFKFFPIDVGNSNKAQMK
Sbjct: 181 WGNWFKFFPIDVGNSNKAQMK 201

[Close]

BLAST of CsaV3_4G006750.1 vs. TrEMBL
Match: tr|A0A1S3BTS2|A0A1S3BTS2_CUCME (uncharacterized protein LOC103493080 OS=Cucumis melo OX=3656 GN=LOC103493080 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.8e-91
Identity = 168/185 (90.81%), Postives = 173/185 (93.51%), Query Frame = 0


Query: 17  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP 76
           MGNCSLKGMAVDC KPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP
Sbjct: 1   MGNCSLKGMAVDCVKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP 60

Query: 77  VSEPLDAGKSYFLLPLSQSTNDGESPLPVPPPSKDVGSESGLEVLPAGGNGVWRVKLVID 136
            SEPLDAGKSYFLLPLSQ TND ES  P P PSKD+GSESGLEVLPA GNGVWRVKLVID
Sbjct: 61  FSEPLDAGKSYFLLPLSQPTNDTESS-PPPLPSKDLGSESGLEVLPASGNGVWRVKLVID 120

Query: 137 TKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIGGWKPMWGNWFKFFPIDVGNSN 196
           TKQLGEILAEEGNTEALIER+RAAAATAAVQSPRRGKI GWKPMWGNW KFFP+D GN+N
Sbjct: 121 TKQLGEILAEEGNTEALIERIRAAAATAAVQSPRRGKIVGWKPMWGNWLKFFPMDFGNNN 180

Query: 197 KAQMK 202
           KAQ+K
Sbjct: 181 KAQIK 184

[Close]

BLAST of CsaV3_4G006750.1 vs. TrEMBL
Match: tr|A0A061G5E2|A0A061G5E2_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_016495 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.2e-32
Identity = 88/203 (43.35%), Postives = 120/203 (59.11%), Query Frame = 0


Query: 17  MGNCSLKGMAVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPLP 76
           MGNCSLKG+  +C   IR+LTD+G II+  GPK   +I N++P   Y V RR   S PLP
Sbjct: 1   MGNCSLKGVTGECSNSIRVLTDAGEIIDIKGPKLAREIANSFPG--YAVCRRGQASLPLP 60

Query: 77  VSEPLDAGKSYFLLPLSQSTNDGESPL------------------PVPPPS-------KD 136
             E L +G  Y+LLP+ +    G++ +                   + PP        ++
Sbjct: 61  EDECLVSGGFYYLLPMEKVHKSGDTGVCEQVNKEAVKKLEVDWMNRIEPPKMSSADFVEN 120

Query: 137 VGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRR 192
           + S S LEVLP+  NGVW+VKLVI ++QL +IL+E+ NTEALIE+MR AAA++A  +P+R
Sbjct: 121 LSSGSALEVLPSQKNGVWKVKLVISSQQLEDILSEQVNTEALIEKMRMAAASSATLTPKR 180

[Close]

BLAST of CsaV3_4G006750.1 vs. TrEMBL
Match: tr|A0A2R6QMZ1|A0A2R6QMZ1_ACTCH (Dihydroxy-acid dehydratase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc15566 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 5.5e-32
Identity = 96/190 (50.53%), Postives = 121/190 (63.68%), Query Frame = 0


Query: 17  MGNCSLKGM-AVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSPL 76
           MGNCSLKG+ AV+    IRI+TDSG I++F GPK V ++L  +P   YG+FR+ ++SSPL
Sbjct: 1   MGNCSLKGVSAVEGIDSIRIMTDSGQILHFEGPKFVGEVLVEFPG--YGIFRKVHMSSPL 60

Query: 77  PVSEPLDAGKSYFLLPLSQS--TNDGESPL------------PVPPPSKDVGSESGLEVL 136
              E L  G+SY+LLPL +S    D E+ L            PV   +  V +ES +EVL
Sbjct: 61  LDHEQLVRGQSYYLLPLGESMLARDSENALGLNKGKFVKEAEPVRMSTSAV-NESAVEVL 120

Query: 137 PAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSPRRGKIG------ 186
           P    GVWRVKLVIDTKQLGEIL+EE NTEALIE+MR AA +A+   P+R KI       
Sbjct: 121 PPPRKGVWRVKLVIDTKQLGEILSEEVNTEALIEQMRLAANSASA-VPKRTKINWAQWGL 180

[Close]

BLAST of CsaV3_4G006750.1 vs. TrEMBL
Match: tr|V4SXB1|V4SXB1_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10023315mg PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 7.2e-32
Identity = 91/200 (45.50%), Postives = 116/200 (58.00%), Query Frame = 0


Query: 17  MGNCSLKGM--AVDCEKPIRILTDSGHIINFHGPKQVHQILNNYPPGIYGVFRRPNLSSP 76
           MGNCSLKG+    DC   IR+LTDSG I+ F  PK   ++L NYP   YG+F R   SSP
Sbjct: 1   MGNCSLKGIVDTNDCPNFIRVLTDSGRILEFTSPKLAREVLENYPG--YGIFPRGQASSP 60

Query: 77  LPVSEPLDAGKSYFLLPLSQSTN------------------DGESPLPVPPPS------- 136
           L   E L +G  Y+LLPL +                     + E    + PP        
Sbjct: 61  LADHESLVSGLFYYLLPLGKDHKLCDDVVRHRKQEERHKKLEAECMELMDPPKMSSADFV 120

Query: 137 KDVGSESGLEVLPAGGNGVWRVKLVIDTKQLGEILAEEGNTEALIERMRAAAATAAVQSP 187
           +++ + S LEVLP+ GNGVW+VKL I+TKQL EIL+E+ NTEALIE+MR AA++AA  +P
Sbjct: 121 ENLATGSALEVLPSHGNGVWKVKLAINTKQLEEILSEQVNTEALIEKMRMAASSAASLTP 180

The following BLAST results are available for this feature:

BLAST of CsaV3_4G006750.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653223.1	4.8e-112	100.00	PREDICTED: uncharacterized protein LOC105435189 [Cucumis sativus] >KGN53422.1 hy...	[more]
XP_008451927.1	2.7e-91	90.81	PREDICTED: uncharacterized protein LOC103493080 [Cucumis melo]	[more]
XP_022985422.1	5.7e-81	81.08	uncharacterized protein LOC111483432 [Cucurbita maxima]	[more]
XP_023522023.1	2.8e-80	80.54	uncharacterized protein LOC111785895 [Cucurbita pepo subsp. pepo] >XP_023552871....	[more]
XP_022931435.1	1.1e-79	80.54	uncharacterized protein LOC111437614 [Cucurbita moschata]	[more]

BLAST of CsaV3_4G006750.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61920.1	1.5e-14	35.67	unknown protein	[more]
AT4G10910.1	3.2e-09	58.82	unknown protein	[more]
AT3G10120.1	9.6e-06	29.03	unknown protein	[more]

BLAST of CsaV3_4G006750.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_4G006750.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KYF7\|A0A0A0KYF7_CUCSA	3.2e-112	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052720 PE=4 SV=1	[more]
tr\|A0A1S3BTS2\|A0A1S3BTS2_CUCME	1.8e-91	90.81	uncharacterized protein LOC103493080 OS=Cucumis melo OX=3656 GN=LOC103493080 PE=...	[more]
tr\|A0A061G5E2\|A0A061G5E2_THECC	3.2e-32	43.35	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_016495 PE=4 SV=1	[more]
tr\|A0A2R6QMZ1\|A0A2R6QMZ1_ACTCH	5.5e-32	50.53	Dihydroxy-acid dehydratase OS=Actinidia chinensis var. chinensis OX=1590841 GN=C...	[more]
tr\|V4SXB1\|V4SXB1_9ROSI	7.2e-32	45.50	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10023315mg PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_4G006750	CsaV3_4G006750	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G006750.1.exon1	CsaV3_4G006750.1.exon1	exon
CsaV3_4G006750.1.exon2	CsaV3_4G006750.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G006750.1.cds1	CsaV3_4G006750.1.cds1	CDS
CsaV3_4G006750.1.cds2	CsaV3_4G006750.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_4G006750.1	CsaV3_4G006750.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 17..179 e-value: 1.3E-12 score: 48.5
None	No IPR available	PANTHER	PTHR33148:SF13	SUBFAMILY NOT NAMED	coord: 17..185
None	No IPR available	PANTHER	PTHR33148	FAMILY NOT NAMED	coord: 17..185