CsaV3_2G024230 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAAATACTATTCTACTGATTTCACTTCCAATCTACTCTCCCTTCCCTTCCCAACGGCACCAAAAATTAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAACTTCCAGATCCCCAGGGTATTTTGGTCATTTCAGTTAACACAACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTTCCACAGCACATTCCCACTGTATCTCTCTGCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCTCCTTCCTTCCTCTTCTCCTCTGAGTGAAGAAGAAGCCATTAACAAAAAATACACACCAAATCAAAGCTTCGGAGTGCTTTCCAAGCAAACCACCCCAAACCCTTAATTCTCAACTCCCATTTCTTCATTTCTTCATTTTTTCATTTCTTCTTCTTCATCTTCCTTCCTCTCTTTCTTCTCCAATGGACAGAACCACTCCTGTTCGGAAACCTCATACCTCCACTGCTGATCTCCTCACCTGGCCTGAACTTCCTCCCGCTGATTCCCCTGCTCTTCCCTCTTCTGCTTCTCGCTCAGCTCCCCGCTCTCATCAGGTAAAACTTTCTACATTTCTATCTTTTTCTTTCTTTTCTTTTCTTCTTCCCTTTGCCTTATTCTCTTCTCTTTTAGCCCTCCGATGGGATTAGTAAGGTCGTCTTTGGAGGCCAGGTTACGGATGAAGAGGTCGAGAGCTTGAACAAAAGGTGAGATCTAACGCTCCTTCTCTTTCCTTCAATCTTTATTCATTTCATTCCATTCTATTTTCCTTTTTGTTTCTTTTTACCTTCTTACCCAATTCCATACTAACAGAATTCTCTTATTCTTCTCTTTGGCTTTTCTACGCTTTGTTTTATTTTATGCCACCGATCTGCTTGTTTACACTCTTACTTTGGTCAACTCATTCAAATTTAACATCTCTTTCTTGTTCTAATGTCTCGTGATTGGATCTCAAATTTTCAATGCTCTCTATTTTTCAATATATTATACGTCAGATCTCCAATTTTTTTGTGGAGTCTATTAGTTTGAATTTTTAAACGAGCTGCTTCAATTGTTTTATTTTCAAACTGCAGGAAGCCCTGTTCTGGATATAAAATGAAGGAGATGACTGGGAGTGGAATTTTTGTTGGTAATGAAGGAGATGAAGAACTAGAATCTGGAAGCGCCAACCCTTCACAGAATAAAACAGGAATACGTATGTACCAGGTATCCATCGAACGAGATCAATTATTTTAGTTTTGAATGTGAACTGTGAGCGAATTTGTGGTTTGGGTTCTGAGGCAATTCTTATCTAACTCATAATCTTGATTGATTGATCAAACTGCAGCAAACATTGGCTGGAATTAGTCATATTTCATTTGGTGAAGAAGGTAGTGTTTCTCCTAAAAAGCCTACTACGGTACCTGAGGTTGCGAAGCAGCGTGAGTTGAGTGGGAACTTAGAAAGTGATGCCGATGCAAAGTTGAAGAAGCAGCTCTCTGATGCCAAATGCAAGGAGCTTAGTGGACATGACATATTTGCTCCTCCTCCTGAGATTTTGCCTCGACCAACAACAGCTCGCACTTTGGATCTAAAAGGAAGCATAGAGATTGGGGAGCCTGACAGTGTAAGTAGTACTCCACTAAAAATCTCTTGTTAAGTAGTTTTCTGGATGAAATTCTAGACACTCTCATTCACGCATAACCATTTAGAAGGCAATCCCACAAATGCCATTCACTCATTTTGCTTAGAACTATAGAATTTAAGTTTGGTACGTTTGATAACCGTTTGGTTTTGAAAATCAAGCCTACTTCTGTTCATTGGTTTATTTGTTTCTTCTGCACGAACTTTTACAAGTGTTTTTTAAATATATAAGCCGAGTTTTGAAAATTGAAGATGTAGTTTCTAAGAACTCTTTTTTTGGAATTTGAAGTTTGGTTCAGAATTCAATTGTATTTCTGAAGAAACGGTGAAAAAACCAACACAATTTTCAGAAATTGAAAGCCATGGAGTGAGTATCTTTACCATATTCCTCTTGCCTCTTGGTTCGTTCTTTGGGAAACATGGATAGTAGGGTGGCGCATTGTGTTATTGATATATTAAAAGCAACCCATCTGCTTTCGTTTTCTAACTTAGTAGTGAATTTACCGTGGTATTAGAGTGGGAGATGTTGTGTTCAAACTCTTATAATAAATGTTACTTGGTTTGCTTCATATTTTCCTCGATGGGGTCAATCTCACAATGATGAAATCCTAGGATTTAGTTGGTTAATCTACGTGCAACTAATCCATCACAAGGGCGGTTCATCCCTAATTTCTCTAGTTTAATCGTTTCTTTGCACCATATTTTCATGGATGGGGCCAAAAGCTCACAATGATGAAATCCTAGGATTCCAGTTGGTTTAATATGCGTGCACAATCATCACAAATCTTTCTATGTGGGGCTGCTTTTTCTGAATAATCAAGCATGTCCCTATTTGATAAGCTGATATGGCTTCGGTTAGACGGTAGTTGTTTGTTGCCTTTTATGCTTAGTTTTTTAGTTTACTTTTCTTCTAAGTTTTTTCTTCAAGACATATGATATCATTTAATTAATTACCCAATTACCTCCTTTCCATTCCTAAACAGAGAGGCATAATCCCCGGAGAAGAACCTTCAGTAAAGACAGCAAAGAAGATTTACGACAAGAAGTTTTCAGAATTATCAGGAAATGACATCTTCAAAGGTGACGTTCCTCCATCGTCTACAGAGAAACCATTGAGTGTTGCAAAGTTGCGAGAGATGAGTGGCAACGACATATTTGCAGACGGAAAGGTAGAGACCCGAGACTACTTAGGCGGGGTACGCAAACCACCAGGTGGTGAGAGCAGCATTGCCTTGGTTTAAATCATCTAGGTTTCTAACAAAACTCAATACTTTCACTTGGTGGGGTGGTGGGGGGTGGATGATATGCATATGGTGTTATTGGGAATTGTCATCTGGTTTGGGTAAAATTATGTTGTTAGGTTTTAACTTTTGGTTAGTCAACAACTATGGAAGTCTCTGCTAATTGGGTTGTGTTCCATAATGTTTTCTTTTGTACTTGGTTGTGTTGTGTGTCTTGTGTCTAGTAGTTCAGTTTTTTTTTTTTTTTTGGTTGTCTTCTGGCTATTTTACTTCCATTACTTGGGGTTTTCATTTTTATTTATCATTATTATATTGATTAATTGATTTGGCTATGATGCTGAAAAGATCAAACTATAATTCTCATTTCCATTCTTAACAATCATTTTATTCTCACTTCATTCCATTATATTACTATGGTTCTGAAATCTATTTTATCATCTTTTTTCTTTTTTTTTTCATGGAATCATTGCTTCAAACTTTTGAAGACTTCTAGGTTTTATCTTATGATAGAGATTTGAATTGTTTCACACCTCATCATCTGATGA ATGGACAGAACCACTCCTGTTCGGAAACCTCATACCTCCACTGCTGATCTCCTCACCTGGCCTGAACTTCCTCCCGCTGATTCCCCTGCTCTTCCCTCTTCTGCTTCTCGCTCAGCTCCCCGCTCTCATCAGCCCTCCGATGGGATTAGTAAGGTCGTCTTTGGAGGCCAGGTTACGGATGAAGAGGTCGAGAGCTTGAACAAAAGGAAGCCCTGTTCTGGATATAAAATGAAGGAGATGACTGGGAGTGGAATTTTTGTTGGTAATGAAGGAGATGAAGAACTAGAATCTGGAAGCGCCAACCCTTCACAGAATAAAACAGGAATACGTATGTACCAGCAAACATTGGCTGGAATTAGTCATATTTCATTTGGTGAAGAAGGTAGTGTTTCTCCTAAAAAGCCTACTACGGTACCTGAGGTTGCGAAGCAGCGTGAGTTGAGTGGGAACTTAGAAAGTGATGCCGATGCAAAGTTGAAGAAGCAGCTCTCTGATGCCAAATGCAAGGAGCTTAGTGGACATGACATATTTGCTCCTCCTCCTGAGATTTTGCCTCGACCAACAACAGCTCGCACTTTGGATCTAAAAGGAAGCATAGAGATTGGGGAGCCTGACAGTAGAGGCATAATCCCCGGAGAAGAACCTTCAGTAAAGACAGCAAAGAAGATTTACGACAAGAAGTTTTCAGAATTATCAGGAAATGACATCTTCAAAGGTGACGTTCCTCCATCGTCTACAGAGAAACCATTGAGTGTTGCAAAGTTGCGAGAGATGAGTGGCAACGACATATTTGCAGACGGAAAGGTAGAGACCCGAGACTACTTAGGCGGGGTACGCAAACCACCAGGTGGTGAGAGCAGCATTGCCTTGGTTTAA ATGGACAGAACCACTCCTGTTCGGAAACCTCATACCTCCACTGCTGATCTCCTCACCTGGCCTGAACTTCCTCCCGCTGATTCCCCTGCTCTTCCCTCTTCTGCTTCTCGCTCAGCTCCCCGCTCTCATCAGCCCTCCGATGGGATTAGTAAGGTCGTCTTTGGAGGCCAGGTTACGGATGAAGAGGTCGAGAGCTTGAACAAAAGGAAGCCCTGTTCTGGATATAAAATGAAGGAGATGACTGGGAGTGGAATTTTTGTTGGTAATGAAGGAGATGAAGAACTAGAATCTGGAAGCGCCAACCCTTCACAGAATAAAACAGGAATACGTATGTACCAGCAAACATTGGCTGGAATTAGTCATATTTCATTTGGTGAAGAAGGTAGTGTTTCTCCTAAAAAGCCTACTACGGTACCTGAGGTTGCGAAGCAGCGTGAGTTGAGTGGGAACTTAGAAAGTGATGCCGATGCAAAGTTGAAGAAGCAGCTCTCTGATGCCAAATGCAAGGAGCTTAGTGGACATGACATATTTGCTCCTCCTCCTGAGATTTTGCCTCGACCAACAACAGCTCGCACTTTGGATCTAAAAGGAAGCATAGAGATTGGGGAGCCTGACAGTAGAGGCATAATCCCCGGAGAAGAACCTTCAGTAAAGACAGCAAAGAAGATTTACGACAAGAAGTTTTCAGAATTATCAGGAAATGACATCTTCAAAGGTGACGTTCCTCCATCGTCTACAGAGAAACCATTGAGTGTTGCAAAGTTGCGAGAGATGAGTGGCAACGACATATTTGCAGACGGAAAGGTAGAGACCCGAGACTACTTAGGCGGGGTACGCAAACCACCAGGTGGTGAGAGCAGCATTGCCTTGGTTTAA MDRTTPVRKPHTSTADLLTWPELPPADSPALPSSASRSAPRSHQPSDGISKVVFGGQVTDEEVESLNKRKPCSGYKMKEMTGSGIFVGNEGDEELESGSANPSQNKTGIRMYQQTLAGISHISFGEEGSVSPKKPTTVPEVAKQRELSGNLESDADAKLKKQLSDAKCKELSGHDIFAPPPEILPRPTTARTLDLKGSIEIGEPDSRGIIPGEEPSVKTAKKIYDKKFSELSGNDIFKGDVPPSSTEKPLSVAKLREMSGNDIFADGKVETRDYLGGVRKPPGGESSIALV
BLAST of CsaV3_2G024230 vs. NCBI nr
Match: XP_004142997.1 (PREDICTED: uncharacterized protein LOC101215119 [Cucumis sativus] >KGN62250.1 hypothetical protein Csa_2G345910 [Cucumis sativus]) HSP 1 Score: 493.0 bits (1268), Expect = 6.8e-136 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of CsaV3_2G024230 vs. NCBI nr
Match: XP_008445341.1 (PREDICTED: uncharacterized protein LOC103488402 [Cucumis melo]) HSP 1 Score: 488.4 bits (1256), Expect = 1.7e-134 Identity = 289/291 (99.31%), Postives = 289/291 (99.31%), Query Frame = 0
BLAST of CsaV3_2G024230 vs. NCBI nr
Match: XP_023547326.1 (uncharacterized protein LOC111806182 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 463.8 bits (1192), Expect = 4.4e-127 Identity = 271/291 (93.13%), Postives = 276/291 (94.85%), Query Frame = 0
BLAST of CsaV3_2G024230 vs. NCBI nr
Match: XP_022132174.1 (uncharacterized protein LOC111005096 [Momordica charantia]) HSP 1 Score: 462.2 bits (1188), Expect = 1.3e-126 Identity = 268/292 (91.78%), Postives = 276/292 (94.52%), Query Frame = 0
BLAST of CsaV3_2G024230 vs. NCBI nr
Match: XP_022951840.1 (uncharacterized protein LOC111454570 [Cucurbita moschata] >XP_023002695.1 uncharacterized protein LOC111496478 [Cucurbita maxima] >XP_023537292.1 uncharacterized protein LOC111798406 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 462.2 bits (1188), Expect = 1.3e-126 Identity = 272/291 (93.47%), Postives = 277/291 (95.19%), Query Frame = 0
BLAST of CsaV3_2G024230 vs. TAIR10
Match: AT1G35780.1 (unknown protein) HSP 1 Score: 297.4 bits (760), Expect = 9.9e-81 Identity = 172/294 (58.50%), Postives = 194/294 (65.99%), Query Frame = 0
BLAST of CsaV3_2G024230 vs. TAIR10
Match: AT1G78150.3 (unknown protein) HSP 1 Score: 295.4 bits (755), Expect = 3.8e-80 Identity = 175/320 (54.69%), Postives = 199/320 (62.19%), Query Frame = 0
BLAST of CsaV3_2G024230 vs. TAIR10
Match: AT4G39860.1 (unknown protein) HSP 1 Score: 268.5 bits (685), Expect = 4.9e-72 Identity = 182/312 (58.33%), Postives = 215/312 (68.91%), Query Frame = 0
BLAST of CsaV3_2G024230 vs. TAIR10
Match: AT2G22270.1 (unknown protein) HSP 1 Score: 141.4 bits (355), Expect = 9.1e-34 Identity = 123/341 (36.07%), Postives = 163/341 (47.80%), Query Frame = 0
BLAST of CsaV3_2G024230 vs. TAIR10
Match: AT2G22260.1 (oxidoreductase, 2OG-Fe(II) oxygenase family protein) HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06 Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of CsaV3_2G024230 vs. Swiss-Prot
Match: sp|Q9SIE0|ALKB2_ARATH (DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana OX=3702 GN=ALKBH2 PE=2 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 2.2e-05 Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of CsaV3_2G024230 vs. TrEMBL
Match: tr|A0A0A0LK08|A0A0A0LK08_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345910 PE=4 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 4.5e-136 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of CsaV3_2G024230 vs. TrEMBL
Match: tr|A0A1S3BD79|A0A1S3BD79_CUCME (uncharacterized protein LOC103488402 OS=Cucumis melo OX=3656 GN=LOC103488402 PE=4 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 1.1e-134 Identity = 289/291 (99.31%), Postives = 289/291 (99.31%), Query Frame = 0
BLAST of CsaV3_2G024230 vs. TrEMBL
Match: tr|W9S3B2|W9S3B2_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021568 PE=4 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 7.7e-104 Identity = 228/297 (76.77%), Postives = 248/297 (83.50%), Query Frame = 0
BLAST of CsaV3_2G024230 vs. TrEMBL
Match: tr|A0A2P5CKL7|A0A2P5CKL7_PARAD (N-lysine methyltransferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_144840 PE=4 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 3.8e-103 Identity = 238/298 (79.87%), Postives = 259/298 (86.91%), Query Frame = 0
BLAST of CsaV3_2G024230 vs. TrEMBL
Match: tr|A0A2P5G1T8|A0A2P5G1T8_9ROSA (N-lysine methyltransferase OS=Trema orientalis OX=63057 GN=TorRG33x02_003000 PE=4 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 1.9e-102 Identity = 228/298 (76.51%), Postives = 249/298 (83.56%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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