CsaV3_2G017860 (gene) Cucumber (Chinese Long) v3

NameCsaV3_2G017860
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionterpene synthase 10-like isoform X1
Locationchr2 : 14866863 .. 14867102 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAAATTAAAAAGATGTGACGTCCCAAAATCAATGAATGATGTAGGAGTTTCAGAGTGTGATGCTCGTAATTACATAAAACATTTGATCAGTGAGACGTGGAAGAAGCTAAATGAATGCGAGACTGAAAATATTGCCTTGTCTCAAGTTATCATTCAAATGTCTAAGAATCTTGCTCGAATGGCTCATTGCATGTACTTAAATGGCTCATTGCATGTACTTAAAAGGGAGATGGACATG

mRNA sequence

AATAAATTAAAAAGATGTGACGTCCCAAAATCAATGAATGATGTAGGAGTTTCAGAGTGTGATGCTCGTAATTACATAAAACATTTGATCAGTGAGACGTGGAAGAAGCTAAATGAATGCGAGACTGAAAATATTGCCTTGTCTCAAGTTATCATTCAAATGTCTAAGAATCTTGCTCGAATGGCTCATTGCATGTACTTAAATGGCTCATTGCATGTACTTAAAAGGGAGATGGACATG

Coding sequence (CDS)

AATAAATTAAAAAGATGTGACGTCCCAAAATCAATGAATGATGTAGGAGTTTCAGAGTGTGATGCTCGTAATTACATAAAACATTTGATCAGTGAGACGTGGAAGAAGCTAAATGAATGCGAGACTGAAAATATTGCCTTGTCTCAAGTTATCATTCAAATGTCTAAGAATCTTGCTCGAATGGCTCATTGCATGTACTTAAATGGCTCATTGCATGTACTTAAAAGGGAGATGGACATG

Protein sequence

NKLKRCDVPKSMNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSKNLARMAHCMYLNGSLHVLKREMDM
BLAST of CsaV3_2G017860 vs. NCBI nr
Match: KGN62107.1 (hypothetical protein Csa_2G298290 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 9.9e-29
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0

Query: 1   NKLKRCDVPKSMNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSKNLAR 60
           NKLKRCDVPKSMNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSKNLAR
Sbjct: 73  NKLKRCDVPKSMNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSKNLAR 132

Query: 61  MAHCM 66
           MAHC+
Sbjct: 133 MAHCI 137

BLAST of CsaV3_2G017860 vs. NCBI nr
Match: XP_008460931.1 (PREDICTED: terpene synthase 10-like isoform X1 [Cucumis melo])

HSP 1 Score: 117.1 bits (292), Expect = 2.8e-23
Identity = 61/81 (75.31%), Postives = 68/81 (83.95%), Query Frame = 0

Query: 1   NKLKRCDVPKS----MNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSK 60
           ++LKR DVPKS    MND GVSE DARNYIKHLI+ETWKKLNE E ENIALSQVIIQMSK
Sbjct: 507 DELKRGDVPKSIQCYMNDTGVSENDARNYIKHLINETWKKLNESEAENIALSQVIIQMSK 566

Query: 61  NLARMAHCMYLNGSLHVLKRE 78
           NLARMA CMYLNG  + +++E
Sbjct: 567 NLARMAQCMYLNGDGYGIEQE 587

BLAST of CsaV3_2G017860 vs. NCBI nr
Match: XP_008460932.1 (PREDICTED: terpene synthase 10-like isoform X2 [Cucumis melo])

HSP 1 Score: 117.1 bits (292), Expect = 2.8e-23
Identity = 61/81 (75.31%), Postives = 68/81 (83.95%), Query Frame = 0

Query: 1   NKLKRCDVPKS----MNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSK 60
           ++LKR DVPKS    MND GVSE DARNYIKHLI+ETWKKLNE E ENIALSQVIIQMSK
Sbjct: 506 DELKRGDVPKSIQCYMNDTGVSENDARNYIKHLINETWKKLNESEAENIALSQVIIQMSK 565

Query: 61  NLARMAHCMYLNGSLHVLKRE 78
           NLARMA CMYLNG  + +++E
Sbjct: 566 NLARMAQCMYLNGDGYGIEQE 586

BLAST of CsaV3_2G017860 vs. NCBI nr
Match: XP_011650166.1 (PREDICTED: terpene synthase 10-like [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 4.7e-15
Identity = 45/76 (59.21%), Postives = 53/76 (69.74%), Query Frame = 0

Query: 1   NKLKRCDVPKS----MNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSK 60
           ++LKR DVPKS    MND G SE +AR YIKHLI ETWKK+N+ E EN  + QV +  +K
Sbjct: 464 DELKRGDVPKSIQCYMNDTGASESNARKYIKHLIDETWKKINKIEVENSIIPQVFVDRAK 523

Query: 61  NLARMAHCMYLNGSLH 73
           NLARMA CMY  G  H
Sbjct: 524 NLARMAQCMYQYGDGH 539

BLAST of CsaV3_2G017860 vs. NCBI nr
Match: XP_008461030.1 (PREDICTED: terpene synthase 10-like [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 1.8e-14
Identity = 44/76 (57.89%), Postives = 53/76 (69.74%), Query Frame = 0

Query: 1   NKLKRCDVPKS----MNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSK 60
           ++LKR DVPKS    MND G SE +AR YIKHLI ETWKK+N+ E EN  + +V +  +K
Sbjct: 491 DELKRGDVPKSIQCYMNDTGASESNARKYIKHLIDETWKKMNKIEVENPIIPRVFVDRAK 550

Query: 61  NLARMAHCMYLNGSLH 73
           NLARMA CMY  G  H
Sbjct: 551 NLARMAQCMYQYGDGH 566

BLAST of CsaV3_2G017860 vs. TAIR10
Match: AT3G25810.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 5.2e-08
Identity = 32/80 (40.00%), Postives = 50/80 (62.50%), Query Frame = 0

Query: 1   NKLKRCDVPKS----MNDVGVSECDARNYIKHLISETWKKLN-ECET---ENIALSQVII 60
           ++L R DV KS    M++ GVSE +AR +++ +IS TW ++N E  T    +  LS+  +
Sbjct: 496 DELARGDVLKSVQCYMHETGVSEEEARTHVQQMISHTWDEMNYEARTAARSSSLLSRRFV 555

Query: 61  QMSKNLARMAHCMYLNGSLH 73
           + + NLARM+ CMY +G  H
Sbjct: 556 ETAMNLARMSQCMYQHGDGH 575

BLAST of CsaV3_2G017860 vs. TAIR10
Match: AT3G25820.1 (terpene synthase-like sequence-1,8-cineole)

HSP 1 Score: 43.1 bits (100), Expect = 9.2e-05
Identity = 29/78 (37.18%), Postives = 45/78 (57.69%), Query Frame = 0

Query: 2   KLKRCDVPKS----MNDVGVSECDARNYIKHLISETWKKLN-ECET--ENIALSQVIIQM 61
           +L R DV KS    M++ G SE  AR+++  +IS+ W  +N E +T   + + S+   + 
Sbjct: 495 ELARGDVLKSVQCYMHETGASEERARDHVHQMISDMWDDMNSETKTACNSSSRSRGFKEA 554

Query: 62  SKNLARMAHCMYLNGSLH 73
           + NLARM+ CMY  G  H
Sbjct: 555 AMNLARMSQCMYQYGDGH 572

BLAST of CsaV3_2G017860 vs. TAIR10
Match: AT3G25830.1 (terpene synthase-like sequence-1,8-cineole)

HSP 1 Score: 43.1 bits (100), Expect = 9.2e-05
Identity = 29/78 (37.18%), Postives = 45/78 (57.69%), Query Frame = 0

Query: 2   KLKRCDVPKS----MNDVGVSECDARNYIKHLISETWKKLN-ECET--ENIALSQVIIQM 61
           +L R DV KS    M++ G SE  AR+++  +IS+ W  +N E +T   + + S+   + 
Sbjct: 495 ELARGDVLKSVQCYMHETGASEERARDHVHQMISDMWDDMNSETKTACNSSSRSRGFKEA 554

Query: 62  SKNLARMAHCMYLNGSLH 73
           + NLARM+ CMY  G  H
Sbjct: 555 AMNLARMSQCMYQYGDGH 572

BLAST of CsaV3_2G017860 vs. Swiss-Prot
Match: sp|Q93X23|MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex OX=58334 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-12
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 0

Query: 1   NKLKRCDVPKS----MNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSK 60
           ++LKR DVPK+    MN+ G SE  AR YIK+LIS TWKK+N+    +   S + I+++ 
Sbjct: 498 DELKRGDVPKAIQCYMNETGASEEGAREYIKYLISATWKKMNKDRAASSPFSHIFIEIAL 557

Query: 61  NLARMAHCMYLNGSLHVL 75
           NLARMA C+Y +G  H L
Sbjct: 558 NLARMAQCLYQHGDGHGL 575

BLAST of CsaV3_2G017860 vs. Swiss-Prot
Match: sp|Q6PWU2|ATESY_VITVI ((-)-alpha-terpineol synthase OS=Vitis vinifera OX=29760 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 8.3e-11
Identity = 37/76 (48.68%), Postives = 46/76 (60.53%), Query Frame = 0

Query: 1   NKLKRCDVPKS----MNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSK 60
           ++LKR DVPKS    M + G SE DAR +  +LI ETWKKLNE         +  I ++ 
Sbjct: 490 DELKRGDVPKSIQCYMYETGASEEDARKHTSYLIGETWKKLNEDGAVESPFPETFIGIAM 549

Query: 61  NLARMAHCMYLNGSLH 73
           NLARMA CMY +G  H
Sbjct: 550 NLARMAQCMYQHGDGH 565

BLAST of CsaV3_2G017860 vs. Swiss-Prot
Match: sp|B9T536|TPS10_RICCO (Terpene synthase 10 OS=Ricinus communis OX=3988 GN=TPS10 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-10
Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = 0

Query: 1   NKLKRCDVPKSMN----DVGVSECDARNYIKHLISETWKKLN-ECETENIALSQVIIQMS 60
           ++LKR D PKS+     + GVSE  AR +I++LI ETWKK+N E E  +   S++ I+++
Sbjct: 454 DELKRGDNPKSIQCYIYETGVSELKAREHIQYLIGETWKKINKEREYIDSPFSKIFIEVA 513

Query: 61  KNLARMAHCMYLNGSLH 73
            NLARMA CMY +G  H
Sbjct: 514 TNLARMAQCMYQHGDGH 530

BLAST of CsaV3_2G017860 vs. Swiss-Prot
Match: sp|A7IZZ2|TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa OX=3483 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.1e-10
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 0

Query: 1   NKLKRCDVPKS----MNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSK 60
           +++KR DVPKS    M+D G SE +AR +IK LISE WK++N+ +  N   S+  +Q  K
Sbjct: 519 DEMKRGDVPKSIQCYMHDTGASEDEAREHIKFLISEIWKEMNDEDEYNSIFSKEFVQACK 578

Query: 61  NLARMAHCMYLNGSLH 73
           NL RM+  MY +G  H
Sbjct: 579 NLGRMSLFMYQHGDGH 594

BLAST of CsaV3_2G017860 vs. Swiss-Prot
Match: sp|Q8L5K4|GTPS_CITLI (Gamma-terpinene synthase, chloroplastic OS=Citrus limon OX=2708 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.1e-10
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 0

Query: 1   NKLKRCDVPKS----MNDVGVSECDARNYIKHLISETWKKLNECETENIA-LSQVIIQMS 60
           ++LKR DVPKS    M++ GVSE +AR +I+ LI+ETW K+N     N   L  V I ++
Sbjct: 505 DELKRGDVPKSIQCYMHETGVSEDEAREHIRDLIAETWMKMNSARFGNPPYLPDVFIGIA 564

Query: 61  KNLARMAHCMYLNGSLH 73
            NL RM+ CMYL G  H
Sbjct: 565 MNLVRMSQCMYLYGDGH 581

BLAST of CsaV3_2G017860 vs. TrEMBL
Match: tr|A0A0A0LMW0|A0A0A0LMW0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G298290 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 6.5e-29
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0

Query: 1   NKLKRCDVPKSMNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSKNLAR 60
           NKLKRCDVPKSMNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSKNLAR
Sbjct: 73  NKLKRCDVPKSMNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSKNLAR 132

Query: 61  MAHCM 66
           MAHC+
Sbjct: 133 MAHCI 137

BLAST of CsaV3_2G017860 vs. TrEMBL
Match: tr|A0A1S3CES4|A0A1S3CES4_CUCME (terpene synthase 10-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499666 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-23
Identity = 61/81 (75.31%), Postives = 68/81 (83.95%), Query Frame = 0

Query: 1   NKLKRCDVPKS----MNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSK 60
           ++LKR DVPKS    MND GVSE DARNYIKHLI+ETWKKLNE E ENIALSQVIIQMSK
Sbjct: 507 DELKRGDVPKSIQCYMNDTGVSENDARNYIKHLINETWKKLNESEAENIALSQVIIQMSK 566

Query: 61  NLARMAHCMYLNGSLHVLKRE 78
           NLARMA CMYLNG  + +++E
Sbjct: 567 NLARMAQCMYLNGDGYGIEQE 587

BLAST of CsaV3_2G017860 vs. TrEMBL
Match: tr|A0A1S3CD28|A0A1S3CD28_CUCME (terpene synthase 10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499666 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-23
Identity = 61/81 (75.31%), Postives = 68/81 (83.95%), Query Frame = 0

Query: 1   NKLKRCDVPKS----MNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSK 60
           ++LKR DVPKS    MND GVSE DARNYIKHLI+ETWKKLNE E ENIALSQVIIQMSK
Sbjct: 506 DELKRGDVPKSIQCYMNDTGVSENDARNYIKHLINETWKKLNESEAENIALSQVIIQMSK 565

Query: 61  NLARMAHCMYLNGSLHVLKRE 78
           NLARMA CMYLNG  + +++E
Sbjct: 566 NLARMAQCMYLNGDGYGIEQE 586

BLAST of CsaV3_2G017860 vs. TrEMBL
Match: tr|A0A1S3CDT7|A0A1S3CDT7_CUCME (terpene synthase 10-like OS=Cucumis melo OX=3656 GN=LOC103499735 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-14
Identity = 44/76 (57.89%), Postives = 53/76 (69.74%), Query Frame = 0

Query: 1   NKLKRCDVPKS----MNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSK 60
           ++LKR DVPKS    MND G SE +AR YIKHLI ETWKK+N+ E EN  + +V +  +K
Sbjct: 491 DELKRGDVPKSIQCYMNDTGASESNARKYIKHLIDETWKKMNKIEVENPIIPRVFVDRAK 550

Query: 61  NLARMAHCMYLNGSLH 73
           NLARMA CMY  G  H
Sbjct: 551 NLARMAQCMYQYGDGH 566

BLAST of CsaV3_2G017860 vs. TrEMBL
Match: tr|A0A0A0LQ61|A0A0A0LQ61_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G299910 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.5e-13
Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = 0

Query: 1  NKLKRCDVPKS----MNDVGVSECDARNYIKHLISETWKKLNECETENIALSQVIIQMSK 60
          N+L R DVPKS    M D G SE DAR +I+HLI ETWKKLN+ + EN    +V I+ +K
Sbjct: 10 NELARGDVPKSIQCYMKDTGGSESDARKHIRHLIDETWKKLNKVQVENSIFPKVFIERAK 69

Query: 61 NLARMAHCMYLNGSLH 73
          N+ARMA CMY  G  H
Sbjct: 70 NVARMAQCMYQYGDGH 85

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN62107.19.9e-2998.46hypothetical protein Csa_2G298290 [Cucumis sativus][more]
XP_008460931.12.8e-2375.31PREDICTED: terpene synthase 10-like isoform X1 [Cucumis melo][more]
XP_008460932.12.8e-2375.31PREDICTED: terpene synthase 10-like isoform X2 [Cucumis melo][more]
XP_011650166.14.7e-1559.21PREDICTED: terpene synthase 10-like [Cucumis sativus][more]
XP_008461030.11.8e-1457.89PREDICTED: terpene synthase 10-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT3G25810.15.2e-0840.00Terpenoid cyclases/Protein prenyltransferases superfamily protein[more]
AT3G25820.19.2e-0537.18terpene synthase-like sequence-1,8-cineole[more]
AT3G25830.19.2e-0537.18terpene synthase-like sequence-1,8-cineole[more]
Match NameE-valueIdentityDescription
sp|Q93X23|MYRS_QUEIL1.2e-1248.72Myrcene synthase, chloroplastic OS=Quercus ilex OX=58334 PE=1 SV=1[more]
sp|Q6PWU2|ATESY_VITVI8.3e-1148.68(-)-alpha-terpineol synthase OS=Vitis vinifera OX=29760 PE=1 SV=1[more]
sp|B9T536|TPS10_RICCO1.1e-1048.05Terpene synthase 10 OS=Ricinus communis OX=3988 GN=TPS10 PE=2 SV=1[more]
sp|A7IZZ2|TPS2_CANSA3.1e-1046.05(+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa OX=3483 PE=1 SV=1[more]
sp|Q8L5K4|GTPS_CITLI4.1e-1048.05Gamma-terpinene synthase, chloroplastic OS=Citrus limon OX=2708 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0LMW0|A0A0A0LMW0_CUCSA6.5e-2998.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G298290 PE=4 SV=1[more]
tr|A0A1S3CES4|A0A1S3CES4_CUCME1.8e-2375.31terpene synthase 10-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499666 PE=3... [more]
tr|A0A1S3CD28|A0A1S3CD28_CUCME1.8e-2375.31terpene synthase 10-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499666 PE=3... [more]
tr|A0A1S3CDT7|A0A1S3CDT7_CUCME1.2e-1457.89terpene synthase 10-like OS=Cucumis melo OX=3656 GN=LOC103499735 PE=3 SV=1[more]
tr|A0A0A0LQ61|A0A0A0LQ61_CUCSA6.5e-1355.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G299910 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008949Isoprenoid_synthase_dom_sf
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G017860.1CsaV3_2G017860.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008949Isoprenoid synthase domain superfamilyGENE3DG3DSA:1.10.600.10coord: 1..79
e-value: 5.2E-13
score: 50.5
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILYSSF48576Terpenoid synthasescoord: 12..70
NoneNo IPR availablePANTHERPTHR31225:SF161,8-CINEOLE SYNTHASE 1, CHLOROPLASTIC-RELATEDcoord: 2..73
NoneNo IPR availablePANTHERPTHR31225FAMILY NOT NAMEDcoord: 2..73

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_2G017860Cla97C02G027210Watermelon (97103) v2cucwmbB124
The following gene(s) are paralogous to this gene:

None