CsaV3_2G017350.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G017350.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	CACTA en-spm transposon protein
Location	chr2 : 14469243 .. 14472908 (-)
Sequence length	675

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCAATCAAACAATTCTAATCAAAATAGTATTGGTGAGCAAGAAGTAGTGTTCGTAGATTCAGACATTCAAAGTATGTTTGCATTTTCTATGTTAAATCTTTTAGTTTTCATATAACATTAGATGTTTTAATATTAACATTTCTTATGTAGGTTCTAGTACAAAAACAAAAGGTCGAGGATTGACTAGAGGGGTTGCGCGCACTTGAGAAATATGTCCAAGCAAATGGTCTCATTCCAATTAAAATTGAGCTCAAAGATAGAAAACCGATTTGTAAGGACTCTTCCAAGTCAAACTCTCAGATTGGAAAAGAGGTACGAGCGATAGTACCACTTGAATGTGAACATTGGTCAAATATATCCAAAGAGGTCAAAAGGGAGATAGTAGATAGACTTTCACTAAGTTATTTAAGTTTTAGTTTTAAGGAAATACTATATATTTTTTTTTACTAAGTATAAACTAACTTGTTTTATTTCTTAATGCTAGAACTACTTCATTCTAGACTTAGATGACCCTTTGGTACAAGATTACCTTGATCACGAGATGAGTGTATTGTATAGAGATTTTCATTGTTCACTACACAAAAGCTACAAAAAGTGTGATTCTCCAACTGAAGCTCGAAAACATTGTGACAAACGAGTGGCACAGGATTCAGATTGGGCTCGTTTATGTGATCGATGGGAACGAGAAGGCTTTAAGAGTAGATCTGAAGCAAATACTAAGGCACGATCTAAACTTCCATTCACTCATCGAGGTGGAACTGTAACATTTTTACGCCATAAACAGAAAATGGTATGATACTTATTTTTGTATAGTATTTATAAATACTTTATCATACTTATAATTTTGGTTGTAATGTGTAGAAAGAAGAGGGTAAGGAAATAAGTAACATTGAATTATTCCAACCCACGCATTCCGATGAGAAGAAGAGGTGGGTGGATGAAGCTAAAGCGAAATATGTACGTAATGACACTCATTGTTGAAATTTTTCTTAACTTATATATAACACATTTATACTAGGGATAGTTGCAAATTTAGCAATTAGATTCAAAATAATTAAGTATATAGCAACATTTTAAAAAATTTGCAAATATAGCAAAATTTGTCAAATTCTATCAATGATATAAGTCTATCACCGACAGATCATGTTGTAAATATTGGTTTATAACTAATAGACCATAACGAGTCTATTAGCGATATAAGTCTATCAACGATAGTTTTGCTATATTTGCAAATTTTTTTTTAAAATGTTGCTATATCCTTGATTATTATTCCTCAAATAGCTATCCATTACAATTACCCTTTATAACTATTATGTAATTATGATGTAGGATGAAATGGTGGAATTAAAAACCACTTTATCACAAGAAGGGAGTAAACTACTTCTAGAAAAGGAAATATGTGAACGGGTATTGCGTAAACGATTGGGGCAGGTGAAAAGACAAGGTTGGGGACCAAGACCCAAGAATGCTAGAAATGAAGCAATTCAACAAAGCACCAAAAAAGCAAATGCACAGATTGCACACTTGCAAAGTATAGTTGAATTGCAACAAGCTACAATTGAATTGAGAGTCAATACATTTTTCAACTTAATTAGCTTGATATAAAATGTTAGATTAGAGTAGTATATACAAACATTGTATATTGTGAATTGATATGACTATCCTGTAGTTATGGTAGTCATAAATTCGTTCTTATGATGATTTTGATGATTAGAACGTTGTAGAGTGTCATCATGATGATTTCGTGCTTGTGATTTTGGTTCTTCATGTGGATATGTCCCCTTTCCTCATTTACGGAGTGTCATTGTGATTTTTGTTCTTGATGTGAATGTGTCCCCCCTCCCCTCCCCTCCTTTTGGTGCTTGATGTAGACATGTTCCCCACCCCTTTCTCATTATTTGAATTTTCTATTTAGACATGCCTCACTCCCCTCACTCATTGTTTTAGAATGTTTAAGTTTCAACCATTTGAGAGTAGTGTCATTATGCTTCAACCATTTGAATTCGTTGCTTTTCATGTAGACATGCCCCCTTTCCTCATTATGGAGTTTGTTGCTTTCACTTTAGATATGCTCCCTCCCCTCCCCTCATTCTGGTGCTTTGTGATTAGAATGTTATGGAGTGTCATTGTGATTGTTGTTCTTAATGTGGATATGTCCCCCCTCCCCTCAATTTGGTGCTTGATGTGGACATAACCCCCACCCCCTCCTCATTGTTTGGATTTTCAATTTAGACATGCCCCCTCCCCCTCACTCATTATTTTAGAACATTTGAATTTCAACCATTTGAGAGTAGTGTCATTATGCTTTAAAGTTCTAAGTTTTGTTTATTGAGTTTAATCATATATTTAATTTGTTGCTTTCCATGTAGACATGTCTCATTTCCTCATTATGGAAGTGTCATTGTGATTTTGATTCTTGATGTTGACATGCCCCCTCTCCTCCCTCATTGTTTTAGAATGTTTGAGTTTCAACCATTTGAGAGTAGTGACATTATGCTTTAAAGTGCTAAGTTTTGTTTACTGAGTTTAATCATATATTGAATTTGGTGCTTTTCATGTAGACATGTCCCATTTCCTTATTATAGAGTGTCATTGTGATTTTGGTCCTTGATGTGGACATGCCTCCTCCCCTCCCTCATTGTTTTAGAATGTTTGAGTTTCATCCATTTGAGAGTAGTGTATTATGCTTTGAAGTGCTAAGTTTCGTTTATTGAGTTTAATCATATTGAATTCATTGCTTTCCATGTACACATTTCAGATTTGACGCACAAATGGTCTTCTATACAAGATTTTGAAGTTGACTTTGGATGAATATGAAAAGAGTTTTTGGTTCGTATCATATAAATTTGTTAGGAAATATATTTTCATGATTCCAAGACTTGTAGGAATTCTTTGTTATTATAACCTTTTGTTAGACTTGTTGGAATGCCAAGACATGGAACTTCTTGATGTAACTACATGGTTGTAACTTTAGAACTAACTTTGGACATCCACTTTTTGTATGTAGCTTTTCACAGTTCTTAAAATTATTATCCAACGATGGTTTTGTAGCATAATGGTTAAGTGTTTCGTTTATTGAGGTTATGGGATTGAAACCTAGTAGGTGAAGAAGAAGAAGATGATGATGGAAAGATAGTTATTAAAATTATTATACGTGACATTTTATACCAGGTTTATATAATAAATTGGATTATATTTTTTATATAATAAAATACTTTTACTGGCATTTACAATAACATGGCAGAAGCATTGATTGAAAGAAATATATATTGGAATTTTTAATGGCACACTTCAACAAGTCGCAAAATATATTTGTAATGGTCCCAAATTAATCTTTACTAACAACATTATTTGTAACATCACTTTTAGTGGCGATCATAATACATCACTAAAACAATAAATAGTGACATAACATATGTTACTAAAAGTAAAATTTTAGTAACGCGGAAACGTCATTAAAAGTATCTCTTTTGCGTCGCTAAAACTTTTAGCTACGTAGATACAACTACAGTCTTAGCGACGAATAGTATTTCGTCGCTAATACTTTTAGCGACACGTTTTTGGTGTACCACTAAACATTAAATTTCTTGTAGTGATTGGTTGTGTACAGATTGTCAAGTACTTGATCTTTATTATACTTCTTGTCACAGGTCCAACATAA

mRNA sequence

ATGCACCAATCAAACAATTCTAATCAAAATAGTATTGGTGAGCAAGAAGTAGTGTTCGTAGATTCAGACATTCAAAACTTAGATGACCCTTTGGTACAAGATTACCTTGATCACGAGATGAGTGTATTGTATAGAGATTTTCATTGTTCACTACACAAAAGCTACAAAAAGTGTGATTCTCCAACTGAAGCTCGAAAACATTGTGACAAACGAGTGGCACAGGATTCAGATTGGGCTCGTTTATGTGATCGATGGGAACGAGAAGGCTTTAAGAGTAGATCTGAAGCAAATACTAAGGCACGATCTAAACTTCCATTCACTCATCGAGGTGGAACTGTAACATTTTTACGCCATAAACAGAAAATGAAAGAAGAGGGTAAGGAAATAAGTAACATTGAATTATTCCAACCCACGCATTCCGATGAGAAGAAGAGGTGGGTGGATGAAGCTAAAGCGAAATATGATGAAATGGTGGAATTAAAAACCACTTTATCACAAGAAGGGAGTAAACTACTTCTAGAAAAGGAAATATGTGAACGGGTATTGCGTAAACGATTGGGGCAGGTGAAAAGACAAGGTTGGGGACCAAGACCCAAGAATGCTAGAAATGAAGCAATTCAACAAAGCACCAAAAAAGCAAATGCACAGATTGCACACTTGCAAAGTCCAACATAA

Coding sequence (CDS)

ATGCACCAATCAAACAATTCTAATCAAAATAGTATTGGTGAGCAAGAAGTAGTGTTCGTAGATTCAGACATTCAAAACTTAGATGACCCTTTGGTACAAGATTACCTTGATCACGAGATGAGTGTATTGTATAGAGATTTTCATTGTTCACTACACAAAAGCTACAAAAAGTGTGATTCTCCAACTGAAGCTCGAAAACATTGTGACAAACGAGTGGCACAGGATTCAGATTGGGCTCGTTTATGTGATCGATGGGAACGAGAAGGCTTTAAGAGTAGATCTGAAGCAAATACTAAGGCACGATCTAAACTTCCATTCACTCATCGAGGTGGAACTGTAACATTTTTACGCCATAAACAGAAAATGAAAGAAGAGGGTAAGGAAATAAGTAACATTGAATTATTCCAACCCACGCATTCCGATGAGAAGAAGAGGTGGGTGGATGAAGCTAAAGCGAAATATGATGAAATGGTGGAATTAAAAACCACTTTATCACAAGAAGGGAGTAAACTACTTCTAGAAAAGGAAATATGTGAACGGGTATTGCGTAAACGATTGGGGCAGGTGAAAAGACAAGGTTGGGGACCAAGACCCAAGAATGCTAGAAATGAAGCAATTCAACAAAGCACCAAAAAAGCAAATGCACAGATTGCACACTTGCAAAGTCCAACATAA

Protein sequence

MHQSNNSNQNSIGEQEVVFVDSDIQNLDDPLVQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDKRVAQDSDWARLCDRWEREGFKSRSEANTKARSKLPFTHRGGTVTFLRHKQKMKEEGKEISNIELFQPTHSDEKKRWVDEAKAKYDEMVELKTTLSQEGSKLLLEKEICERVLRKRLGQVKRQGWGPRPKNARNEAIQQSTKKANAQIAHLQSPT

Homology

[Close]

BLAST of CsaV3_2G017350.1 vs. NCBI nr
Match: KGN62059.1 (hypothetical protein Csa_2G294860 [Cucumis sativus])

HSP 1 Score: 228.0 bits (580), Expect = 3.1e-56
Identity = 121/169 (71.60%), Postives = 122/169 (72.19%), Query Frame = 0


Query: 1   MHQSNNSNQNSIGEQEVVFVDSDIQ----------------------------------- 60
           MHQSNNSNQNSIGEQEVVFVDSDIQ                                   
Sbjct: 1   MHQSNNSNQNSIGEQEVVFVDSDIQKGLRALEKYVQANGLIPIKIELKDRKPICKDSSKS 60

Query: 61  ------------NLDDPLVQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDKRVA 120
                       +LDDPLVQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDKRVA
Sbjct: 61  NSQIGKENYFILDLDDPLVQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDKRVA 120

Query: 121 QDSDWARLCDRWEREGFKSRSEANTKARSKLPFTHRGGTVTFLRHKQKM 123
           QDSDWARLCDRWEREGFKSRSEANTKARSKLPFTHRGGTVTFLRHKQKM
Sbjct: 121 QDSDWARLCDRWEREGFKSRSEANTKARSKLPFTHRGGTVTFLRHKQKM 169

[Close]

BLAST of CsaV3_2G017350.1 vs. NCBI nr
Match: XP_019078959.1 (PREDICTED: uncharacterized protein LOC104881002 [Vitis vinifera])

HSP 1 Score: 117.1 bits (292), Expect = 7.8e-23
Identity = 69/190 (36.32%), Postives = 112/190 (58.95%), Query Frame = 0


Query: 32  VQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDKRVAQDSDWARLCDRWEREGFK 91
           V+  L+ ++S  +R++ C LHK +KK  +  EA+++  + V+   DW  LCDR+  E FK
Sbjct: 109 VKKSLEKQLSDRFRNWRCDLHKHFKKFPTVVEAKRNPHESVSNQEDWDYLCDRFSSEEFK 168

Query: 92  SRSEANTKARSKLPFTHRGGTVTFLRH-KQKMKEEGKEISNIELFQPTHSDEKKRWVD-E 151
            RS  N+  RSK+PF HRGG+ +F++H  Q   E G+ +  IELF+  H   +  W++ E
Sbjct: 169 RRSAINSVNRSKMPFHHRGGSRSFIQHGLQVSTENGEMVGQIELFKLVHWKSQDGWINQE 228

Query: 152 AKAKYDEMVELKTTLSQEGSKLLLEKEICERVLRKRLGQVKRQGWGPRPKNARNEAIQQS 211
           A+  Y++M+EL+     +G   + E EICERV  ++ G VK  G+GP+P +      + S
Sbjct: 229 ARDYYEKMLELQRQPIAKGVVAMTEAEICERVFGQKSGYVKGLGFGPKPISFSKS--RPS 288

Query: 212 TKKANAQIAH 220
           + K   ++ H
Sbjct: 289 SSKREIELEH 296

[Close]

BLAST of CsaV3_2G017350.1 vs. NCBI nr
Match: XP_019080375.1 (PREDICTED: uncharacterized protein LOC104881475 [Vitis vinifera])

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-22
Identity = 65/168 (38.69%), Postives = 102/168 (60.71%), Query Frame = 0


Query: 32  VQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDKRVAQDSDWARLCDRWEREGFK 91
           V+  L+ ++S  +R++ C LHK +KK  +  EA+++  + V+   DW  LCDR+  E FK
Sbjct: 96  VKKSLEKQLSDRFRNWRCDLHKHFKKFPTVVEAKRNPHESVSNQEDWDYLCDRFSSEEFK 155

Query: 92  SRSEANTKARSKLPFTHRGGTVTFLRH-KQKMKEEGKEISNIELFQPTHSDEKKRWVDEA 151
            RS  N+  RSK+PF HRGG+ +F++H  Q   E G+ +  IELF+  H   +  W+++ 
Sbjct: 156 RRSAINSVNRSKMPFHHRGGSRSFIQHGLQVSTENGEMVGQIELFKLVHWKSQDGWINQE 215

Query: 152 KAKYDEMVELKTTLSQEGSKLLLEKEICERVLRKRLGQVKRQGWGPRP 199
           K     M+EL+     EG+  + E +ICERVL ++ G VK  G+GP+P
Sbjct: 216 K-----MLELQRQPIAEGAVAMTEAKICERVLGQKSGYVKGLGFGPKP 258

[Close]

BLAST of CsaV3_2G017350.1 vs. NCBI nr
Match: XP_022156286.1 (uncharacterized protein LOC111023212 [Momordica charantia])

HSP 1 Score: 111.3 bits (277), Expect = 4.3e-21
Identity = 67/190 (35.26%), Postives = 107/190 (56.32%), Query Frame = 0


Query: 11  SIGEQEVVFVDSDIQNLDDPLVQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDK 70
           SI  QE   VD     L   +V  +++ +M + ++ +   LH+ Y + + P EAR +  +
Sbjct: 14  SIMNQEHFRVD-----LSKRVVNKFIEQQMQISFKQYRSDLHQYYCEFEDPVEARANPPE 73

Query: 71  RVAQDSDWARLCDRWEREGFKSRSEANTKARSKLPFTHRGGTVTFLRHKQKMK-EEGKEI 130
           R+    DW  LCDRWE   +K  ++ N K R+KLPF HR G+ +FL+ + ++K +EG +I
Sbjct: 74  RLTNPEDWNHLCDRWETPEWKEITKKNKKNRAKLPFNHRAGSKSFLQLQHELKIKEGSDI 133

Query: 131 SNIELFQPTHSDEKKRWV-DEAKAKYDEMVELKTTLSQEGSKLLLEKEICERVLRKRLGQ 190
             ++LF  +H +EK   V D A+  Y+ M  L    +QEG + + + E C +VL  R   
Sbjct: 134 GPVDLFGESHYNEKDGLVNDNAEDAYENMQNLIKAPTQEGCEPVTQPEACRKVLGDRPDH 193

Query: 191 VKRQGWGPRP 199
           VK  G+GP+P
Sbjct: 194 VKGLGYGPQP 198

[Close]

BLAST of CsaV3_2G017350.1 vs. NCBI nr
Match: XP_019081922.1 (PREDICTED: uncharacterized protein LOC100261419 isoform X1 [Vitis vinifera])

HSP 1 Score: 107.8 bits (268), Expect = 4.7e-20
Identity = 69/195 (35.38%), Postives = 108/195 (55.38%), Query Frame = 0


Query: 32  VQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDKRVAQDSDWARLCDRWEREGFK 91
           +  Y+   M   YR +   LH+ +K+ ++  EAR H    V Q+ DW  LC+ +  E FK
Sbjct: 174 ITKYVHEIMGQRYRTYRYDLHQHFKQFETVEEARLHPPDDVTQE-DWDYLCNLFSLEKFK 233

Query: 92  SRSEANTKARSKLPFTHRGGTVTFLRHKQKMK---EEGKEISNIELFQPTHSDEKKRWV- 151
            R+  N++ R KLPF HRGG+  F  H+Q        G+    +ELF+ TH +E K W+ 
Sbjct: 234 KRATINSENREKLPFNHRGGSKPFAFHRQHNSMSVATGELQGEVELFRATHYNESKGWIN 293

Query: 152 DEAKAKYDEMVELKTTLSQEGSKLLLEKEICERVLRKRLGQVKRQGWGPRPK-NARNEAI 211
           D AK++Y+EM +L+   +Q+G   + + EI +RVL KR G ++  G+G R K +   E  
Sbjct: 294 DTAKSRYEEMRKLQEQSTQDGDTPISDLEITQRVLGKRSGYIRGLGYGSRLKRSTTTEFP 353

Query: 212 QQSTKKANAQIAHLQ 222
            + T++   QI  L+
Sbjct: 354 DEETERLRQQITKLE 367

[Close]

BLAST of CsaV3_2G017350.1 vs. TrEMBL
Match: tr|A0A0A0LM17|A0A0A0LM17_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G294860 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.1e-56
Identity = 121/169 (71.60%), Postives = 122/169 (72.19%), Query Frame = 0


Query: 1   MHQSNNSNQNSIGEQEVVFVDSDIQ----------------------------------- 60
           MHQSNNSNQNSIGEQEVVFVDSDIQ                                   
Sbjct: 1   MHQSNNSNQNSIGEQEVVFVDSDIQKGLRALEKYVQANGLIPIKIELKDRKPICKDSSKS 60

Query: 61  ------------NLDDPLVQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDKRVA 120
                       +LDDPLVQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDKRVA
Sbjct: 61  NSQIGKENYFILDLDDPLVQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDKRVA 120

Query: 121 QDSDWARLCDRWEREGFKSRSEANTKARSKLPFTHRGGTVTFLRHKQKM 123
           QDSDWARLCDRWEREGFKSRSEANTKARSKLPFTHRGGTVTFLRHKQKM
Sbjct: 121 QDSDWARLCDRWEREGFKSRSEANTKARSKLPFTHRGGTVTFLRHKQKM 169

[Close]

BLAST of CsaV3_2G017350.1 vs. TrEMBL
Match: tr|A0A2H5Q237|A0A2H5Q237_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_188460 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.6e-16
Identity = 60/171 (35.09%), Postives = 96/171 (56.14%), Query Frame = 0


Query: 30  PLVQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDKRVAQDSDWARLCDRWEREG 89
           P + +Y+ H M   Y D   + HK +KK  +P+EAR+H  K ++Q  DW  LC+ +E + 
Sbjct: 4   PHILNYVTHSMVERYLDHRYNCHKHFKKYATPSEARQHAYKNISQ-QDWDWLCNHFESDK 63

Query: 90  FKSRSEANTKARSKLPFTHRGGTVTFLRHKQKMKEE-GKEISNIELFQPTHSDEKKRWVD 149
           FK +   N   R KL + HRGG+++F  H++K ++  G++ + IELF  TH   KK W +
Sbjct: 64  FKEKVRKNVDNRKKLKYNHRGGSLSFPGHREKKRKAIGEQPNEIELFYITHFSIKKGWSN 123

Query: 150 -EAKAKYDEMVELKTTLSQEGSKLLLEKEICERVLRKRLGQVKRQGWGPRP 199
            EA+  Y++M E++     +    L  KEI + V+ K       +G+G RP
Sbjct: 124 VEAQYDYEKMKEMEQEPIAKDGTPLSPKEIVDLVVDKNF-----RGFGFRP 168

[Close]

BLAST of CsaV3_2G017350.1 vs. TrEMBL
Match: tr|A0A2P6QVG3|A0A2P6QVG3_ROSCH (Putative transposase, Ptta/En/Spm, plant OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0410891 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.0e-15
Identity = 58/185 (31.35%), Postives = 105/185 (56.76%), Query Frame = 0


Query: 32  VQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDKRVAQDSDWARLCDRWEREGFK 91
           V+ Y+      ++ +F   L K ++K  +  EA ++    V    +W  LC R+  E F+
Sbjct: 6   VERYVITTCQTVFCNFRYKLKKHFEKFSTIEEAIENKHDDVKTQEEWEFLCARFSSEKFQ 65

Query: 92  SRSEANTKARSKLPFTHRGGTVTFLRHKQKMKEEGKEISN-IELFQPTHSDEKKRWVDEA 151
            RSE N   RSKL   H+ G+ +F+ H++++  +  E+   I+ F+  +   KK W   A
Sbjct: 66  IRSEKNAINRSKLTHHHKAGSKSFMSHQEQIATQTGEMQGAIDRFETEYKSTKKGWDLGA 125

Query: 152 KAKYDEMVELKTTLSQ-EGSKLLLEKEICERVLRKRLGQVKRQGWGPRPKNAR--NEAIQ 211
           KAK+DEM++++T  +Q +G++ + + EIC +VL  + G +K  G+GPRP  +R  + +I 
Sbjct: 126 KAKWDEMIKMRTETTQPDGTRTMTDDEICAKVLGVKSGYIKGCGFGPRPPPSRVSHSSIN 185

Query: 212 QSTKK 213
           + ++K
Sbjct: 186 EMSEK 190

[Close]

BLAST of CsaV3_2G017350.1 vs. TrEMBL
Match: tr|A0A2P6QNU2|A0A2P6QNU2_ROSCH (Putative transposase, Ptta/En/Spm, plant OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0385011 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.0e-15
Identity = 58/185 (31.35%), Postives = 105/185 (56.76%), Query Frame = 0


Query: 32  VQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDKRVAQDSDWARLCDRWEREGFK 91
           V+ Y+      ++ +F   L K ++K  +  EA ++    V    +W  LC R+  E F+
Sbjct: 209 VERYVITTCQTVFCNFRYKLKKHFEKFSTIEEAIENKHDDVKTQEEWEFLCARFSSEKFQ 268

Query: 92  SRSEANTKARSKLPFTHRGGTVTFLRHKQKMKEEGKEISN-IELFQPTHSDEKKRWVDEA 151
            RSE N   RSKL   H+ G+ +F+ H++++  +  E+   I+ F+  +   KK W   A
Sbjct: 269 IRSEKNAINRSKLTHHHKAGSKSFMSHQEQIAAQTGEMQGAIDRFETEYKSTKKGWDLGA 328

Query: 152 KAKYDEMVELKTTLSQ-EGSKLLLEKEICERVLRKRLGQVKRQGWGPRPKNAR--NEAIQ 211
           KAK+DEM++++T  +Q +G++ + + EIC +VL  + G +K  G+GPRP  +R  + +I 
Sbjct: 329 KAKWDEMIKMRTETTQPDGTRTMTDDEICAKVLGVKSGYIKGCGFGPRPPPSRVSHSSIN 388

Query: 212 QSTKK 213
           + ++K
Sbjct: 389 EMSEK 393

[Close]

BLAST of CsaV3_2G017350.1 vs. TrEMBL
Match: tr|A0A2P6RFD0|A0A2P6RFD0_ROSCH (Putative transposase, Ptta/En/Spm, plant OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0486961 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 5.2e-15
Identity = 53/171 (30.99%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 30  PLVQDYLDHEMSVLYRDFHCSLHKSYKKCDSPTEARKHCDKRVAQDSDWARLCDRWEREG 89
           P V+ Y++     ++ +F   L K +++  +  EA ++  K V  + +WA LC  +  E 
Sbjct: 197 PWVKRYVNKSFGTVFANFRYKLKKHFEQFSTKEEALENKHKDVKTEEEWAFLCTYFSSED 256

Query: 90  FKSRSEANTKARSKLPFTHRGGTVTFLRHKQKM-KEEGKEISNIELFQPTHSDEKKRWVD 149
           F+  SE N+  RS+L + H+ G+ +F+ H++++  + G+ +  IE F+  +   KK W  
Sbjct: 257 FQIVSEKNSINRSRLKYHHKAGSKSFMLHQEQIDAQSGEMLGAIERFEMEYKSIKKGWDL 316

Query: 150 EAKAKYDEMVELKT-TLSQEGSKLLLEKEICERVLRKRLGQVKRQGWGPRP 199
            AK  +D+MV+++T T   +G++ + + EIC +VL  + G +K  G+GPRP
Sbjct: 317 GAKELWDQMVKMRTETTLPDGTRTMNDDEICAKVLGVKSGYIKGCGFGPRP 367

The following BLAST results are available for this feature:

BLAST of CsaV3_2G017350.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN62059.1	3.1e-56	71.60	hypothetical protein Csa_2G294860 [Cucumis sativus]	[more]
XP_019078959.1	7.8e-23	36.32	PREDICTED: uncharacterized protein LOC104881002 [Vitis vinifera]	[more]
XP_019080375.1	1.3e-22	38.69	PREDICTED: uncharacterized protein LOC104881475 [Vitis vinifera]	[more]
XP_022156286.1	4.3e-21	35.26	uncharacterized protein LOC111023212 [Momordica charantia]	[more]
XP_019081922.1	4.7e-20	35.38	PREDICTED: uncharacterized protein LOC100261419 isoform X1 [Vitis vinifera]	[more]

BLAST of CsaV3_2G017350.1 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G017350.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G017350.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LM17\|A0A0A0LM17_CUCSA	2.1e-56	71.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G294860 PE=4 SV=1	[more]
tr\|A0A2H5Q237\|A0A2H5Q237_CITUN	3.6e-16	35.09	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_188460 PE=4 SV=1	[more]
tr\|A0A2P6QVG3\|A0A2P6QVG3_ROSCH	3.0e-15	31.35	Putative transposase, Ptta/En/Spm, plant OS=Rosa chinensis OX=74649 GN=RchiOBHm_...	[more]
tr\|A0A2P6QNU2\|A0A2P6QNU2_ROSCH	3.0e-15	31.35	Putative transposase, Ptta/En/Spm, plant OS=Rosa chinensis OX=74649 GN=RchiOBHm_...	[more]
tr\|A0A2P6RFD0\|A0A2P6RFD0_ROSCH	5.2e-15	30.99	Putative transposase, Ptta/En/Spm, plant OS=Rosa chinensis OX=74649 GN=RchiOBHm_...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR004252	Probable_transposase_24

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_2G017350	CsaV3_2G017350	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G017350.1	CsaV3_2G017350.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G017350.1.cds5	CsaV3_2G017350.1.cds5	CDS
CsaV3_2G017350.1.cds4	CsaV3_2G017350.1.cds4	CDS
CsaV3_2G017350.1.cds3	CsaV3_2G017350.1.cds3	CDS
CsaV3_2G017350.1.cds2	CsaV3_2G017350.1.cds2	CDS
CsaV3_2G017350.1.cds1	CsaV3_2G017350.1.cds1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G017350.1.exon5	CsaV3_2G017350.1.exon5	exon
CsaV3_2G017350.1.exon4	CsaV3_2G017350.1.exon4	exon
CsaV3_2G017350.1.exon3	CsaV3_2G017350.1.exon3	exon
CsaV3_2G017350.1.exon2	CsaV3_2G017350.1.exon2	exon
CsaV3_2G017350.1.exon1	CsaV3_2G017350.1.exon1	exon

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 147..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..224
None	No IPR available	PANTHER	PTHR33499	FAMILY NOT NAMED	coord: 28..203
IPR004252	Probable transposase, Ptta/En/Spm, plant	PFAM	PF03004	Transposase_24	coord: 76..160 e-value: 1.7E-14 score: 54.0