CsaV3_2G015560.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G015560.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	auxin-responsive protein SAUR21-like
Location	chr2 : 12947530 .. 12948594 (-)
Sequence length	294

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTATCTCTGCATTAGATTAGAGAGTTAGGACAAGACCTATAATAAAACCTTCTCACATGGGTCTGTCATCAGTTGATCTTCGCATGGCGTTTGGTTTTGAAGTTTTCTTGACCTCTTATTTTGGACGATAACTTCACCTCCTTTGAACGAGTGGGACTGCTCACCAGTAGGTAGGGTACATGAGGAAGTGAATGTATTCAAAGCCAAAAAGCAACCCATGTGAGCATTCATGAAGTAGGCCCTCTTAAACACCTACCTGACACTATTTTCCTCTCTCCACTTCTGTATTCCTGTATTTATAAATACAGATGAAATAAACTTCAATCTTCAACTCAAATTTCAAACACATCCTCATTTCAAGTACAACATCTCCCAACTTCTAATCTCCATTCCAGCAGAAAGCCTTTCAAAATTCGTCATGGGAATCAGACTACCTTCACTTCTCCTCAATGCCAAGCAAGTTTTCAAAATGCATACTGTTTCTTCTAGAAACCAATGTGGTGTTCCCAAAGGCCATATCGCAGTTTATGTGGGAGATATTGAAAGAAAGCGGTTTGTGGTTCCACTATCATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTTTGACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTCACATCCAGGCTGCAAATATCCTGAAAGGGAGAAGAAAAACCTTTGTCCACACAATTTTGTCAGATTCCCTCCATTTTTTCCCCTTAGTTGAGAGTAGAAATCATTAATCAATGTATAGTTAGCTTCAAAGTGTTAATGATCGGGTAGCTGAAAGGTGATAGCACATTGCCCATCTACCTGAACATCATTTACACAACTTACAATTCAAATCTGTAAACATGGAAACAGAAATACAGAGTCATATTATCTTACTAAAGGACTTCCCTTCTTGGTGAATTCTTCAACATTCATAAATTTTTAAGTTTTTCCATTCAATTCCCATGAAAAGTTATTTGGATATATCATATTACAAATCATTTTCCCTGATGGCAC

mRNA sequence

ATGGGAATCAGACTACCTTCACTTCTCCTCAATGCCAAGCAAGTTTTCAAAATGCATACTGTTTCTTCTAGAAACCAATGTGGTGTTCCCAAAGGCCATATCGCAGTTTATGTGGGAGATATTGAAAGAAAGCGGTTTGTGGTTCCACTATCATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTTTGACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTCACATCCAGGCTGCAAATATCCTGA

Coding sequence (CDS)

ATGGGAATCAGACTACCTTCACTTCTCCTCAATGCCAAGCAAGTTTTCAAAATGCATACTGTTTCTTCTAGAAACCAATGTGGTGTTCCCAAAGGCCATATCGCAGTTTATGTGGGAGATATTGAAAGAAAGCGGTTTGTGGTTCCACTATCATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAGAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTTTGACAATTCCTTGCAGAGAAGATGTCTTCATCAATCTCACATCCAGGCTGCAAATATCCTGA

Protein sequence

MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS

Homology

[Close]

BLAST of CsaV3_2G015560.1 vs. NCBI nr
Match: XP_004147016.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus] >KGN61882.1 hypothetical protein Csa_2G258780 [Cucumis sativus])

HSP 1 Score: 202.6 bits (514), Expect = 6.2e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60
          MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 98
          LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 97

[Close]

BLAST of CsaV3_2G015560.1 vs. NCBI nr
Match: XP_008457637.1 (PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo])

HSP 1 Score: 201.1 bits (510), Expect = 1.8e-48
Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60
          MGIRLPSLL NAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA
Sbjct: 1  MGIRLPSLLFNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 98
          LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 97

[Close]

BLAST of CsaV3_2G015560.1 vs. NCBI nr
Match: XP_022986729.1 (auxin-responsive protein SAUR21-like [Cucurbita maxima])

HSP 1 Score: 191.0 bits (484), Expect = 1.9e-45
Identity = 91/97 (93.81%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60
          MGIRLPSLLLNAKQV KM TV SRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQVVKMQTVPSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 98
          LLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Sbjct: 61 LLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS 97

[Close]

BLAST of CsaV3_2G015560.1 vs. NCBI nr
Match: XP_022944352.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata])

HSP 1 Score: 190.7 bits (483), Expect = 2.4e-45
Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1   MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60
           MGIRLPSLLLNAKQ+ KM TVSSRNQCGVPKGHIAVYVGD ERKRFVVP+SYLNHPSFSA
Sbjct: 40  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDTERKRFVVPISYLNHPSFSA 99

Query: 61  LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 98
           LLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRLQ S
Sbjct: 100 LLKTAEEEFGFKHPTGGLTIPCREDVFINLTSRLQTS 136

[Close]

BLAST of CsaV3_2G015560.1 vs. NCBI nr
Match: XP_022944372.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata])

HSP 1 Score: 188.7 bits (478), Expect = 9.2e-45
Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60
          MGIRLPSLLLNAKQ+ KM TVSSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQIVKMQTVSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSA 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 98
          LLK+AEEEFGFKHPTGGLTIPCRE+VFINLTS LQ S
Sbjct: 61 LLKTAEEEFGFKHPTGGLTIPCREEVFINLTSSLQTS 97

[Close]

BLAST of CsaV3_2G015560.1 vs. TAIR10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.5 bits (293), Expect = 4.7e-27
Identity = 55/98 (56.12%), Postives = 74/98 (75.51%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGD-IERKRFVVPLSYLNHPSFS 60
          M IR+  +L ++KQ+ K  + SS N   +PKGH+AVYVG+ ++++RFVVP++YL+HP F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSS-NNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 ALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 98
           LL+ AEEEFGF HP GGLTIPC E +FI+L SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CsaV3_2G015560.1 vs. TAIR10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-26
Identity = 57/105 (54.29%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 1   MGIRLPSLLLNAKQVFKMHTVSSRNQCG------VPKGHIAVYVG---DIERKRFVVPLS 60
           MG+   ++    KQ+ K++++++RN+        VPKGH+AVYVG   ++E+KRFVVP+S
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINL-TSRLQ 96
           +LNHPSF   L  AEEEFGF HP GGLTIPCRE+VF++L  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CsaV3_2G015560.1 vs. TAIR10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.6 bits (283), Expect = 6.8e-26
Identity = 53/87 (60.92%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 9  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEE 68
          LL AK++    T S+      PKG +AVYVG+ ++KR++VPLSYL+ PSF ALL  +EEE
Sbjct: 7  LLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of CsaV3_2G015560.1 vs. TAIR10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.2 bits (282), Expect = 8.9e-26
Identity = 52/87 (59.77%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 9  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEE 68
          LL AK++    T +       PKG +AVYVG+ ++KR++VPLSYLN PSF ALL  +E+E
Sbjct: 7  LLGAKKILSRSTAA---VSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CsaV3_2G015560.1 vs. TAIR10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-25
Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVFKMHTVSS----RNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHP 60
          M IR+P +L ++KQ+ +   + S     +   VPKG++AVYVG+   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSXXXSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSR 94
          SF  LL+ AEEEFGF HP GGLTIPC E++FI+L SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CsaV3_2G015560.1 vs. Swiss-Prot
Match: sp|Q9FJF9|SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-24
Identity = 53/87 (60.92%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 9  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEE 68
          LL AK++    T S+      PKG +AVYVG+ ++KR++VPLSYL+ PSF ALL  +EEE
Sbjct: 7  LLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]

BLAST of CsaV3_2G015560.1 vs. Swiss-Prot
Match: sp|Q9FJF7|SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-24
Identity = 52/87 (59.77%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 9  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEE 68
          LL AK++    T +       PKG +AVYVG+ ++KR++VPLSYLN PSF ALL  +E+E
Sbjct: 7  LLGAKKILSRSTAA---VSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CsaV3_2G015560.1 vs. Swiss-Prot
Match: sp|Q9FJG1|SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.1e-24
Identity = 52/87 (59.77%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 9  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEE 68
          LL AK++    T +       PKG +AVYVG+ ++KR++VPLSYL+ PSF ALL  +EEE
Sbjct: 7  LLGAKKILSRSTAAG---SAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFAHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CsaV3_2G015560.1 vs. Swiss-Prot
Match: sp|Q9FJG0|SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.1e-24
Identity = 51/87 (58.62%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 9  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEE 68
          LL AK++    T ++      PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEE
Sbjct: 7  LLGAKKILSRSTTAA---SAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSR Q
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CsaV3_2G015560.1 vs. Swiss-Prot
Match: sp|Q9FK62|SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.7e-24
Identity = 52/87 (59.77%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 9  LLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSALLKSAEEE 68
          LL AK++    T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEE
Sbjct: 7  LLGAKKILSRSTGAG---SAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDVFINLTSRLQ 96
          FGF HP GGLTIPC ED FIN+TSRLQ
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CsaV3_2G015560.1 vs. TrEMBL
Match: tr|A0A0A0LM71|A0A0A0LM71_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258780 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.1e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60
          MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 98
          LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 97

[Close]

BLAST of CsaV3_2G015560.1 vs. TrEMBL
Match: tr|A0A1S3C787|A0A1S3C787_CUCME (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497285 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.2e-48
Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60
          MGIRLPSLL NAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA
Sbjct: 1  MGIRLPSLLFNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 98
          LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 97

[Close]

BLAST of CsaV3_2G015560.1 vs. TrEMBL
Match: tr|A0A1S4E2E4|A0A1S4E2E4_CUCME (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC107991554 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.2e-36
Identity = 73/97 (75.26%), Postives = 83/97 (85.57%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60
          MGIRLPS+LLNAKQ+ KM  +S+RNQ  VPKGHIAVYVG+I+RKRFVVP+SYL HPSF  
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 98
          LL  +EEEFGF HPTGGLTIPCRED FINLT++L  S
Sbjct: 61 LLNRSEEEFGFCHPTGGLTIPCREDAFINLTAKLHTS 97

[Close]

BLAST of CsaV3_2G015560.1 vs. TrEMBL
Match: tr|A0A0A0LPH3|A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 8.8e-36
Identity = 71/97 (73.20%), Postives = 85/97 (87.63%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60
          MGIR+PSLLLNAKQ+F+M +VS+R    +PKGHIAVYVG+IERKRFVVP+SYLNHP+F +
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 98
          LL  AEEEFGF HP+GGLTIPC+ED FI+LTS+L  S
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKLHTS 97

[Close]

BLAST of CsaV3_2G015560.1 vs. TrEMBL
Match: tr|A0A1S3C631|A0A1S3C631_CUCME (auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497287 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.2e-35
Identity = 74/97 (76.29%), Postives = 83/97 (85.57%), Query Frame = 0


Query: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60
          MGIRLPS+LLNAKQV KM  +S+RNQ  VPKG+IAVYVG+I+RKRFVVP+SYL HPSF  
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLQIS 98
          LLK +EEEFGF HP GGLTIPCRED FINLT+RL  S
Sbjct: 61 LLKRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS 97

The following BLAST results are available for this feature:

BLAST of CsaV3_2G015560.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147016.1	6.2e-49	100.00	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus] >KGN61882.1 hypothet...	[more]
XP_008457637.1	1.8e-48	98.97	PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]	[more]
XP_022986729.1	1.9e-45	93.81	auxin-responsive protein SAUR21-like [Cucurbita maxima]	[more]
XP_022944352.1	2.4e-45	92.78	auxin-responsive protein SAUR21-like [Cucurbita moschata]	[more]
XP_022944372.1	9.2e-45	91.75	auxin-responsive protein SAUR21-like [Cucurbita moschata]	[more]

BLAST of CsaV3_2G015560.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21210.1	4.7e-27	56.12	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.1e-26	54.29	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	6.8e-26	60.92	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	8.9e-26	59.77	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	1.2e-25	54.64	SAUR-like auxin-responsive protein family	[more]

BLAST of CsaV3_2G015560.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FJF9\|SAU21_ARATH	1.2e-24	60.92	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
sp\|Q9FJF7\|SAU22_ARATH	1.6e-24	59.77	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
sp\|Q9FJG1\|SAU19_ARATH	2.1e-24	59.77	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
sp\|Q9FJG0\|SAU20_ARATH	2.1e-24	58.62	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=2 S...	[more]
sp\|Q9FK62\|SAU24_ARATH	2.7e-24	59.77	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]

BLAST of CsaV3_2G015560.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LM71\|A0A0A0LM71_CUCSA	4.1e-49	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258780 PE=4 SV=1	[more]
tr\|A0A1S3C787\|A0A1S3C787_CUCME	1.2e-48	98.97	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497285 PE=...	[more]
tr\|A0A1S4E2E4\|A0A1S4E2E4_CUCME	5.2e-36	75.26	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC107991554 PE=...	[more]
tr\|A0A0A0LPH3\|A0A0A0LPH3_CUCSA	8.8e-36	73.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258670 PE=4 SV=1	[more]
tr\|A0A1S3C631\|A0A1S3C631_CUCME	1.2e-35	76.29	auxin-responsive protein SAUR21-like OS=Cucumis melo OX=3656 GN=LOC103497287 PE=...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_2G015560	CsaV3_2G015560	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G015560.1.cds1	CsaV3_2G015560.1.cds1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G015560.1.exon1	CsaV3_2G015560.1.exon1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_2G015560.1	CsaV3_2G015560.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 17..93 e-value: 1.3E-26 score: 92.5
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 1..95
None	No IPR available	PANTHER	PTHR31929:SF15	SUBFAMILY NOT NAMED	coord: 1..95