CsaV3_1G015670.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G015670.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Protein of unknown function, DUF538
Location	chr1 : 11241789 .. 11242379 (+)
Sequence length	591

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGGCAAACTAGAAAGGGAAGGACTATATGAATCCCACTTTCACATTATCCTTGGGTATACACACCATATACTCAGATCAAAGAAACAAGAAAAGATGTCTGTTGTGACAGAGGAAATCAAAGGCAAAACAGAAGAAGTGTACCATGGAGATGAGATATGCCAAGAGAAATCAAAAGAATTACTCAAAGAAATAGGGCTTCCAAATGGGCTTTTGCCATTGAAAGACATTGAAGAATGCGGGATTATAAGAGAAACAGGTTTTGTTTGGTTGAAGCAGAAAAAAAGCACAACCCACAAGTTTGAGAAGATTGGGAAGCTTGTTTCTTATGCTACTGAAGTCACAGCCACTGTAGAGAAGAACAAAATCAAGAAACTCACTGGAGTTAAGACCAAAGAGCTTTTGATTTGGGTTTCACTGAGTGATATCTATGTTGATGATCCACCCACTGGAAAAATCACCTTTCAAACACCAGCAGGGCTATACAGGACTTTTCCAGTTTCAGCTTTTCAGGTTGAAGAGCCAGTAAAGGCAGTGAGTGAGAAGAAAGAACAAGTGGTGGAAACTGTTGAAGTCAAGGAGATCTAG

mRNA sequence

ATGAATGGCAAACTAGAAAGGGAAGGACTATATGAATCCCACTTTCACATTATCCTTGGGTATACACACCATATACTCAGATCAAAGAAACAAGAAAAGATGTCTGTTGTGACAGAGGAAATCAAAGGCAAAACAGAAGAAGTGTACCATGGAGATGAGATATGCCAAGAGAAATCAAAAGAATTACTCAAAGAAATAGGGCTTCCAAATGGGCTTTTGCCATTGAAAGACATTGAAGAATGCGGGATTATAAGAGAAACAGGTTTTGTTTGGTTGAAGCAGAAAAAAAGCACAACCCACAAGTTTGAGAAGATTGGGAAGCTTGTTTCTTATGCTACTGAAGTCACAGCCACTGTAGAGAAGAACAAAATCAAGAAACTCACTGGAGTTAAGACCAAAGAGCTTTTGATTTGGGTTTCACTGAGTGATATCTATGTTGATGATCCACCCACTGGAAAAATCACCTTTCAAACACCAGCAGGGCTATACAGGACTTTTCCAGTTTCAGCTTTTCAGGTTGAAGAGCCAGTAAAGGCAGTGAGTGAGAAGAAAGAACAAGTGGTGGAAACTGTTGAAGTCAAGGAGATCTAG

Coding sequence (CDS)

ATGAATGGCAAACTAGAAAGGGAAGGACTATATGAATCCCACTTTCACATTATCCTTGGGTATACACACCATATACTCAGATCAAAGAAACAAGAAAAGATGTCTGTTGTGACAGAGGAAATCAAAGGCAAAACAGAAGAAGTGTACCATGGAGATGAGATATGCCAAGAGAAATCAAAAGAATTACTCAAAGAAATAGGGCTTCCAAATGGGCTTTTGCCATTGAAAGACATTGAAGAATGCGGGATTATAAGAGAAACAGGTTTTGTTTGGTTGAAGCAGAAAAAAAGCACAACCCACAAGTTTGAGAAGATTGGGAAGCTTGTTTCTTATGCTACTGAAGTCACAGCCACTGTAGAGAAGAACAAAATCAAGAAACTCACTGGAGTTAAGACCAAAGAGCTTTTGATTTGGGTTTCACTGAGTGATATCTATGTTGATGATCCACCCACTGGAAAAATCACCTTTCAAACACCAGCAGGGCTATACAGGACTTTTCCAGTTTCAGCTTTTCAGGTTGAAGAGCCAGTAAAGGCAGTGAGTGAGAAGAAAGAACAAGTGGTGGAAACTGTTGAAGTCAAGGAGATCTAG

Protein sequence

MNGKLEREGLYESHFHIILGYTHHILRSKKQEKMSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLKQKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETVEVKEI

Homology

[Close]

BLAST of CsaV3_1G015670.1 vs. NCBI nr
Match: KGN65013.1 (hypothetical protein Csa_1G181260 [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 1.0e-103
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MNGKLEREGLYESHFHIILGYTHHILRSKKQEKMSVVTEEIKGKTEEVYHGDEICQEKSK 60
           MNGKLEREGLYESHFHIILGYTHHILRSKKQEKMSVVTEEIKGKTEEVYHGDEICQEKSK
Sbjct: 1   MNGKLEREGLYESHFHIILGYTHHILRSKKQEKMSVVTEEIKGKTEEVYHGDEICQEKSK 60

Query: 61  ELLKEIGLPNGLLPLKDIEECGIIRETGFVWLKQKKSTTHKFEKIGKLVSYATEVTATVE 120
           ELLKEIGLPNGLLPLKDIEECGIIRETGFVWLKQKKSTTHKFEKIGKLVSYATEVTATVE
Sbjct: 61  ELLKEIGLPNGLLPLKDIEECGIIRETGFVWLKQKKSTTHKFEKIGKLVSYATEVTATVE 120

Query: 121 KNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLYRTFPVSAFQVEEPVKAV 180
           KNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLYRTFPVSAFQVEEPVKAV
Sbjct: 121 KNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLYRTFPVSAFQVEEPVKAV 180

Query: 181 SEKKEQVVETVEVKEI 197
           SEKKEQVVETVEVKEI
Sbjct: 181 SEKKEQVVETVEVKEI 196

[Close]

BLAST of CsaV3_1G015670.1 vs. NCBI nr
Match: XP_004139521.2 (PREDICTED: uncharacterized protein LOC101214389 [Cucumis sativus])

HSP 1 Score: 317.8 bits (813), Expect = 2.6e-83
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93
           MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK
Sbjct: 1   MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 60

Query: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153
           QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK
Sbjct: 61  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120

Query: 154 ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETVEVKEI 197
           ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETVEVKEI
Sbjct: 121 ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETVEVKEI 163

[Close]

BLAST of CsaV3_1G015670.1 vs. NCBI nr
Match: XP_016903169.1 (PREDICTED: uncharacterized protein LOC103502227 [Cucumis melo])

HSP 1 Score: 311.2 bits (796), Expect = 2.5e-81
Identity = 159/163 (97.55%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93
           MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK
Sbjct: 1   MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 60

Query: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153
           QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELL+WVSLSDIYVDDPPTGK
Sbjct: 61  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLLWVSLSDIYVDDPPTGK 120

Query: 154 ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETVEVKEI 197
           ITFQTPAGL+RTFPVSAFQVEEPVKA SEKKEQVV TVEVKEI
Sbjct: 121 ITFQTPAGLFRTFPVSAFQVEEPVKAASEKKEQVVGTVEVKEI 163

[Close]

BLAST of CsaV3_1G015670.1 vs. NCBI nr
Match: XP_022157043.1 (uncharacterized protein LOC111023862 [Momordica charantia])

HSP 1 Score: 289.7 bits (740), Expect = 7.7e-75
Identity = 144/160 (90.00%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93
           MS+VTEEI+GK +EVYHGDE CQEKS++LLKEIGLPNGLLPLKDIEECGI+RETGFVWLK
Sbjct: 1   MSLVTEEIRGKADEVYHGDEKCQEKSRDLLKEIGLPNGLLPLKDIEECGIVRETGFVWLK 60

Query: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153
           QKKSTTHKFEKIGKLVSYATEVTATVE+NKIKKLTGVKTKELL+WV+LSDIYVDDPPTGK
Sbjct: 61  QKKSTTHKFEKIGKLVSYATEVTATVEQNKIKKLTGVKTKELLLWVTLSDIYVDDPPTGK 120

Query: 154 ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETVEV 194
           ITFQTP GLYRTFPVSAFQVEEPVK VSEKKE+VV  VEV
Sbjct: 121 ITFQTPTGLYRTFPVSAFQVEEPVKEVSEKKEEVVGAVEV 160

[Close]

BLAST of CsaV3_1G015670.1 vs. NCBI nr
Match: XP_022961599.1 (uncharacterized protein LOC111462128 [Cucurbita moschata] >XP_023516953.1 uncharacterized protein LOC111780709 [Cucurbita pepo subsp. pepo] >XP_023516954.1 uncharacterized protein LOC111780710 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.2 bits (705), Expect = 8.8e-71
Identity = 143/163 (87.73%), Postives = 150/163 (92.02%), Query Frame = 0


Query: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93
           MSV TEEIK K  EVY GDEICQEKSKELLKEIGLPNGLLPLKDIEECGI+RETG+VWLK
Sbjct: 1   MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK 60

Query: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153
           Q+K+TTHKFEKIGKLVSYATEVTA VEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK
Sbjct: 61  QRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120

Query: 154 ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETVEVKEI 197
           ITFQTPAGL+RTFPVSAFQVEEP+K VSE KE  V  V VKE+
Sbjct: 121 ITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV 162

[Close]

BLAST of CsaV3_1G015670.1 vs. TAIR10
Match: AT1G56580.1 (Protein of unknown function, DUF538)

HSP 1 Score: 195.3 bits (495), Expect = 3.6e-50
Identity = 106/163 (65.03%), Postives = 125/163 (76.69%), Query Frame = 0


Query: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93
           M +VT+E++ + E+ Y GDEIC+EK+KE LKE+ +PNGLLPLKDIEE G  RETG VWLK
Sbjct: 1   MGLVTDEVRARAEK-YTGDEICREKTKEFLKEVSMPNGLLPLKDIEEVGYDRETGIVWLK 60

Query: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDP-PTG 153
           QKKS THKFE IGKLVSYATEV A VE  KIKKLTGVK KELLIWV+L+++ ++ P  +G
Sbjct: 61  QKKSITHKFEAIGKLVSYATEVIAQVEVGKIKKLTGVKAKELLIWVTLNELVLEQPTSSG 120

Query: 154 KITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETVEVKE 196
           KI F+TP GL RTFPVSAF V E  K  +EK      T EVKE
Sbjct: 121 KINFRTPTGLSRTFPVSAFVVPEVEKPATEKNN---GTTEVKE 159

[Close]

BLAST of CsaV3_1G015670.1 vs. TAIR10
Match: AT1G09310.1 (Protein of unknown function, DUF538)

HSP 1 Score: 189.1 bits (479), Expect = 2.6e-48
Identity = 100/144 (69.44%), Postives = 117/144 (81.25%), Query Frame = 0


Query: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93
           M +VTEE++ K  E+Y GDEIC+EK+K  LKEI +PNGLLPLKDIEE G  RE+G VWLK
Sbjct: 1   MGLVTEEVRAKA-EMYTGDEICREKTKCFLKEISMPNGLLPLKDIEEVGYDRESGVVWLK 60

Query: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153
           QKKS THKF +I KLVSY TEVTA VE  KIKKLTGVK KELLIWV++++IY ++PPT K
Sbjct: 61  QKKSITHKFTEIDKLVSYGTEVTAIVETGKIKKLTGVKAKELLIWVTINEIYTEEPPT-K 120

Query: 154 ITFQTPAGLYRTFPVSAFQV-EEP 177
           ITF+TP  L RTFPV+AF V EEP
Sbjct: 121 ITFKTPTTLSRTFPVTAFIVPEEP 142

[Close]

BLAST of CsaV3_1G015670.1 vs. TAIR10
Match: AT5G46230.1 (Protein of unknown function, DUF538)

HSP 1 Score: 134.0 bits (336), Expect = 9.8e-32
Identity = 61/129 (47.29%), Postives = 94/129 (72.87%), Query Frame = 0


Query: 47  EVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLKQKKSTTHKFEKIG 106
           E+ +G+  C++K+KE+L  + LP GLLPL ++ E G  + TG+VW+K K    H+F+ IG
Sbjct: 15  EICNGESNCKQKAKEILSTMNLPKGLLPLDNMTEIGHNKSTGYVWIKIKNKVQHRFKAIG 74

Query: 107 KLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLYRTF 166
           + VSY +EVTA +E  ++ +LTG+K+KE+LIWV++S+I+V+     +ITF  P GL RTF
Sbjct: 75  RNVSYDSEVTAILENRRMSQLTGIKSKEILIWVTISEIFVNHQDPTQITFANPTGLSRTF 134

Query: 167 PVSAFQVEE 176
           PV+AF+ +E
Sbjct: 135 PVTAFEEDE 143

[Close]

BLAST of CsaV3_1G015670.1 vs. TAIR10
Match: AT4G24130.1 (Protein of unknown function, DUF538)

HSP 1 Score: 129.0 bits (323), Expect = 3.2e-30
Identity = 65/144 (45.14%), Postives = 98/144 (68.06%), Query Frame = 0


Query: 32  EKMSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVW 91
           E + VV  E +G   E+ +G E C ++S ELL+E+G P G++PLK++ ECG +R TG+VW
Sbjct: 4   EGVVVVGGEREG--AEIVYGAEECYKQSLELLEELGFPKGVMPLKNLVECGRVRATGYVW 63

Query: 92  LKQKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPT 151
           +KQ     H FE     VSY  EVTA V+K  +KK+TGVK+K++ +WV + ++ +++P +
Sbjct: 64  MKQDTPYEHFFEATNTRVSYGLEVTAYVDKCCMKKMTGVKSKQMFLWVPIVEMSMEEPKS 123

Query: 152 GKITFQTPAGLYRTFPVSAFQVEE 176
            KI F+TP G+ R+FPV+ F  EE
Sbjct: 124 KKIYFKTPMGIGRSFPVTGFMDEE 145

[Close]

BLAST of CsaV3_1G015670.1 vs. TAIR10
Match: AT5G49600.1 (Protein of unknown function, DUF538)

HSP 1 Score: 124.4 bits (311), Expect = 7.8e-29
Identity = 70/148 (47.30%), Postives = 97/148 (65.54%), Query Frame = 0


Query: 36  VVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLKQK 95
           +VTE +K K  EVYHGD+ C+EK   LL EIGLPN LL  K+I+ECG +++TGFVWLK K
Sbjct: 1   MVTEAMKAKA-EVYHGDKTCREKFGSLLSEIGLPNRLLSNKEIKECGYVKDTGFVWLKHK 60

Query: 96  KSTTH----------KFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIY 155
           +              +F+ +  +V +  EVTA  E N+IKKLTGVK KE ++W+SL +I 
Sbjct: 61  EKKKEDQKRRYQDLLRFDNV--VVCFEDEVTAYFEPNRIKKLTGVKAKEFMVWISLGEIQ 120

Query: 156 VDDPPTGKITFQTPAGLY-RTFPVSAFQ 173
           V +  +G ITF+T  GL  ++ P+S F+
Sbjct: 121 V-NRSSGLITFKTEVGLLSKSLPLSVFE 144

[Close]

BLAST of CsaV3_1G015670.1 vs. TrEMBL
Match: tr|A0A0A0LTC9|A0A0A0LTC9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181260 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 6.8e-104
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MNGKLEREGLYESHFHIILGYTHHILRSKKQEKMSVVTEEIKGKTEEVYHGDEICQEKSK 60
           MNGKLEREGLYESHFHIILGYTHHILRSKKQEKMSVVTEEIKGKTEEVYHGDEICQEKSK
Sbjct: 1   MNGKLEREGLYESHFHIILGYTHHILRSKKQEKMSVVTEEIKGKTEEVYHGDEICQEKSK 60

Query: 61  ELLKEIGLPNGLLPLKDIEECGIIRETGFVWLKQKKSTTHKFEKIGKLVSYATEVTATVE 120
           ELLKEIGLPNGLLPLKDIEECGIIRETGFVWLKQKKSTTHKFEKIGKLVSYATEVTATVE
Sbjct: 61  ELLKEIGLPNGLLPLKDIEECGIIRETGFVWLKQKKSTTHKFEKIGKLVSYATEVTATVE 120

Query: 121 KNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLYRTFPVSAFQVEEPVKAV 180
           KNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLYRTFPVSAFQVEEPVKAV
Sbjct: 121 KNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLYRTFPVSAFQVEEPVKAV 180

Query: 181 SEKKEQVVETVEVKEI 197
           SEKKEQVVETVEVKEI
Sbjct: 181 SEKKEQVVETVEVKEI 196

[Close]

BLAST of CsaV3_1G015670.1 vs. TrEMBL
Match: tr|A0A1S4E4L7|A0A1S4E4L7_CUCME (uncharacterized protein LOC103502227 OS=Cucumis melo OX=3656 GN=LOC103502227 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.6e-81
Identity = 159/163 (97.55%), Postives = 161/163 (98.77%), Query Frame = 0


Query: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93
           MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK
Sbjct: 1   MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 60

Query: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153
           QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELL+WVSLSDIYVDDPPTGK
Sbjct: 61  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLLWVSLSDIYVDDPPTGK 120

Query: 154 ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETVEVKEI 197
           ITFQTPAGL+RTFPVSAFQVEEPVKA SEKKEQVV TVEVKEI
Sbjct: 121 ITFQTPAGLFRTFPVSAFQVEEPVKAASEKKEQVVGTVEVKEI 163

[Close]

BLAST of CsaV3_1G015670.1 vs. TrEMBL
Match: tr|A0A0A0LYR3|A0A0A0LYR3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G555620 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 8.1e-65
Identity = 124/147 (84.35%), Postives = 139/147 (94.56%), Query Frame = 0


Query: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93
           MS+V EE+KGK  EVYHGDE+CQEKSK++LKE+GLPNGLLPLKDIEECGI+RETGFVW+K
Sbjct: 1   MSIVREEMKGKA-EVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIK 60

Query: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153
           QKKSTTHKFEKIGKLVSYA EVTA VEKNKIKKLTGVKTKELL+WVSLSDIYVD+PP+GK
Sbjct: 61  QKKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGK 120

Query: 154 ITFQTPAGLYRTFPVSAFQVEEPVKAV 181
           I+FQTP GL+RTFPVSAFQV++ VK V
Sbjct: 121 ISFQTPTGLFRTFPVSAFQVQDHVKEV 146

[Close]

BLAST of CsaV3_1G015670.1 vs. TrEMBL
Match: tr|A0A1U8M455|A0A1U8M455_GOSHI (uncharacterized protein LOC107933815 OS=Gossypium hirsutum OX=3635 GN=LOC107933815 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.8e-64
Identity = 124/154 (80.52%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93
           MS+VTEEIKG   E+YHGDEICQEKSK LL+E+G+P+GLLPLKDIEECG +++TGFVWLK
Sbjct: 1   MSLVTEEIKGSASEIYHGDEICQEKSKFLLEEMGMPSGLLPLKDIEECGYVKDTGFVWLK 60

Query: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153
           QKKS THKF+KIGKLVSYATEVTA VEKNKIKKLTGVKTKELL+W++LSDIYVDDPPTG 
Sbjct: 61  QKKSITHKFDKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLVWITLSDIYVDDPPTGN 120

Query: 154 ITFQTPAGLYRTFPVSAFQVEEPVK-AVSEKKEQ 187
           ITF+TPAGL+RTFPVSAF+VE  VK AV +KKE+
Sbjct: 121 ITFKTPAGLFRTFPVSAFEVEGEVKGAVKDKKEE 154

[Close]

BLAST of CsaV3_1G015670.1 vs. TrEMBL
Match: tr|A0A2P5SLH1|A0A2P5SLH1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD03084 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.8e-64
Identity = 124/154 (80.52%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93
           MS+VTEEIKG   E+YHGDEICQEKSK LL+E+G+P+GLLPLKDIEECG +++TGFVWLK
Sbjct: 1   MSLVTEEIKGSASEIYHGDEICQEKSKFLLEEMGMPSGLLPLKDIEECGYVKDTGFVWLK 60

Query: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153
           QKKS THKF+KIGKLVSYATEVTA VEKNKIKKLTGVKTKELL+W++LSDIYVDDPPTG 
Sbjct: 61  QKKSITHKFDKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLVWITLSDIYVDDPPTGN 120

Query: 154 ITFQTPAGLYRTFPVSAFQVEEPVK-AVSEKKEQ 187
           ITF+TPAGL+RTFPVSAF+VE  VK AV +KKE+
Sbjct: 121 ITFKTPAGLFRTFPVSAFEVEGEVKGAVKDKKEE 154

The following BLAST results are available for this feature:

BLAST of CsaV3_1G015670.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65013.1	1.0e-103	100.00	hypothetical protein Csa_1G181260 [Cucumis sativus]	[more]
XP_004139521.2	2.6e-83	100.00	PREDICTED: uncharacterized protein LOC101214389 [Cucumis sativus]	[more]
XP_016903169.1	2.5e-81	97.55	PREDICTED: uncharacterized protein LOC103502227 [Cucumis melo]	[more]
XP_022157043.1	7.7e-75	90.00	uncharacterized protein LOC111023862 [Momordica charantia]	[more]
XP_022961599.1	8.8e-71	87.73	uncharacterized protein LOC111462128 [Cucurbita moschata] >XP_023516953.1 unchar...	[more]

BLAST of CsaV3_1G015670.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G56580.1	3.6e-50	65.03	Protein of unknown function, DUF538	[more]
AT1G09310.1	2.6e-48	69.44	Protein of unknown function, DUF538	[more]
AT5G46230.1	9.8e-32	47.29	Protein of unknown function, DUF538	[more]
AT4G24130.1	3.2e-30	45.14	Protein of unknown function, DUF538	[more]
AT5G49600.1	7.8e-29	47.30	Protein of unknown function, DUF538	[more]

BLAST of CsaV3_1G015670.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G015670.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LTC9\|A0A0A0LTC9_CUCSA	6.8e-104	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181260 PE=4 SV=1	[more]
tr\|A0A1S4E4L7\|A0A1S4E4L7_CUCME	1.6e-81	97.55	uncharacterized protein LOC103502227 OS=Cucumis melo OX=3656 GN=LOC103502227 PE=...	[more]
tr\|A0A0A0LYR3\|A0A0A0LYR3_CUCSA	8.1e-65	84.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G555620 PE=4 SV=1	[more]
tr\|A0A1U8M455\|A0A1U8M455_GOSHI	1.8e-64	80.52	uncharacterized protein LOC107933815 OS=Gossypium hirsutum OX=3635 GN=LOC1079338...	[more]
tr\|A0A2P5SLH1\|A0A2P5SLH1_GOSBA	1.8e-64	80.52	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD03084 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR036758	At5g01610-like
IPR007493	DUF538

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_1G015670	CsaV3_1G015670	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_1G015670.1.exon1	CsaV3_1G015670.1.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_1G015670.1.cds1	CsaV3_1G015670.1.cds1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_1G015670.1	CsaV3_1G015670.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 60..172 e-value: 8.7E-34 score: 116.2
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 40..186
IPR036758	At5g01610-like superfamily	GENE3D	G3DSA:2.30.240.10		coord: 30..183 e-value: 7.0E-26 score: 92.7
IPR036758	At5g01610-like superfamily	SUPERFAMILY	SSF141562	At5g01610-like	coord: 41..176
None	No IPR available	PANTHER	PTHR31676:SF10	SUBFAMILY NOT NAMED	coord: 40..186