MELO3C035075.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C035075.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionDisease resistance protein family
Locationchr11 : 19916485 .. 19916949 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCAAAATATCAAGCTTAAGAGAAATGAGATGTACAGTTACACCCGAAGAAGGAGAAGAAGAAATGGTGAAATTGTTTTCAAAAACCTGGAAGAAATCGAAATATATGCCTTACCAAGACTAGCTTGCCTTCACAATGGAAAATGTACGATTAAGTTTCCATCCTTGGAGATATTGTATACAGTTGGATTGTGTGAAATGGAGACATTTTCACATAGAATACTAAGCTTGCCCAAATTGAAATACATGGGGATAGAAAAATGTGAATTTCAAATCTCGCCAGGCCAAGACATAAATGTCATTATCCGAACACGTTTTCAAATAATCCTCACAACCAAGTATTTGACTCTAAGCATCCAGCCAACAAAGAAGCAAGAACAAAAAAAGTTCCAATTATCACAAATTAAAGAGGTGCGACAGACAGCACACATGGAAACAAACAGAGATGGAGAACAAAACTAG

mRNA sequence

ATGGTGCAAAATATCAAGCTTAAGAGAAATGAGATGTACAGTTACACCCGAAGAAGGAGAAGAAGAAATGGTGAAATTGTTTTCAAAAACCTGGAAGAAATCGAAATATATGCCTTACCAAGACTAGCTTGCCTTCACAATGGAAAATGTACGATTAAGTTTCCATCCTTGGAGATATTGTATACAGTTGGATTGTGTGAAATGGAGACATTTTCACATAGAATACTAAGCTTGCCCAAATTGAAATACATGGGGATAGAAAAATGTGAATTTCAAATCTCGCCAGGCCAAGACATAAATGTCATTATCCGAACACGTTTTCAAATAATCCTCACAACCAAGTATTTGACTCTAAGCATCCAGCCAACAAAGAAGCAAGAACAAAAAAAGTTCCAATTATCACAAATTAAAGAGGTGCGACAGACAGCACACATGGAAACAAACAGAGATGGAGAACAAAACTAG

Coding sequence (CDS)

ATGGTGCAAAATATCAAGCTTAAGAGAAATGAGATGTACAGTTACACCCGAAGAAGGAGAAGAAGAAATGGTGAAATTGTTTTCAAAAACCTGGAAGAAATCGAAATATATGCCTTACCAAGACTAGCTTGCCTTCACAATGGAAAATGTACGATTAAGTTTCCATCCTTGGAGATATTGTATACAGTTGGATTGTGTGAAATGGAGACATTTTCACATAGAATACTAAGCTTGCCCAAATTGAAATACATGGGGATAGAAAAATGTGAATTTCAAATCTCGCCAGGCCAAGACATAAATGTCATTATCCGAACACGTTTTCAAATAATCCTCACAACCAAGTATTTGACTCTAAGCATCCAGCCAACAAAGAAGCAAGAACAAAAAAAGTTCCAATTATCACAAATTAAAGAGGTGCGACAGACAGCACACATGGAAACAAACAGAGATGGAGAACAAAACTAG

Protein sequence

MVQNIKLKRNEMYSYTRRRRRRNGEIVFKNLEEIEIYALPRLACLHNGKCTIKFPSLEILYTVGLCEMETFSHRILSLPKLKYMGIEKCEFQISPGQDINVIIRTRFQIILTTKYLTLSIQPTKKQEQKKFQLSQIKEVRQTAHMETNRDGEQN
Homology
[Close]
BLAST of MELO3C035075.2 vs. NCBI nr
Match: XP_011659043.1 (PREDICTED: probable disease resistance protein At4g27220 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 2.0e-25
Identity = 63/87 (72.41%), Postives = 70/87 (80.46%), Query Frame = 0 

Query: 23   NGEIVFKNLEEIEIYALPRLACLHNGKCTIKFPSLEILYTVGL--CEMETFSHRILSLPK 82
            NGEIVFKNL+ I ++ LPRLAC HNGKC IKFPSLEIL  +G    EMETFSH ILS P 
Sbjct: 1540 NGEIVFKNLKSIILFGLPRLACFHNGKCMIKFPSLEIL-NIGCRRYEMETFSHGILSFPT 1599

Query: 83   LKYMGIEKCEFQISPGQDINVIIRTRF 108
            LK M IE+CEF+ISPGQDINVIIR+ F
Sbjct: 1600 LKSMEIEECEFKISPGQDINVIIRSHF 1625

[Close]
BLAST of MELO3C035075.2 vs. NCBI nr
Match: KGN63358.1 (hypothetical protein Csa_2G432260 [Cucumis sativus])

HSP 1 Score: 96.3 bits (238), Expect = 9.8e-17
Identity = 46/63 (73.02%), Postives = 50/63 (79.37%), Query Frame = 0 

Query: 23  NGEIVFKNLEEIEIYALPRLACLHNGKCTIKFPSLEILYTVGLCEMETFSHRILSLPKLK 82
           NGEIVFK+L+EI +Y LPRLA   NGKCTIKFPSLE+LY  G  EMETFSH ILS PKLK
Sbjct: 40  NGEIVFKHLKEIILYGLPRLASFDNGKCTIKFPSLEVLYIYGSYEMETFSHGILSFPKLK 99

Query: 83  YMG 86
             G
Sbjct: 100 SHG 102

[Close]
BLAST of MELO3C035075.2 vs. NCBI nr
Match: XP_011650060.1 (PREDICTED: uncharacterized protein LOC105434705 [Cucumis sativus])

HSP 1 Score: 96.3 bits (238), Expect = 9.8e-17
Identity = 46/63 (73.02%), Postives = 50/63 (79.37%), Query Frame = 0 

Query: 23  NGEIVFKNLEEIEIYALPRLACLHNGKCTIKFPSLEILYTVGLCEMETFSHRILSLPKLK 82
           NGEIVFK+L+EI +Y LPRLA   NGKCTIKFPSLE+LY  G  EMETFSH ILS PKLK
Sbjct: 189 NGEIVFKHLKEIILYGLPRLASFDNGKCTIKFPSLEVLYIYGSYEMETFSHGILSFPKLK 248

Query: 83  YMG 86
             G
Sbjct: 249 SHG 251

[Close]
BLAST of MELO3C035075.2 vs. NCBI nr
Match: XP_022944432.1 (probable disease resistance protein At4g27220 [Cucurbita moschata])

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-07
Identity = 28/81 (34.57%), Postives = 48/81 (59.26%), Query Frame = 0 

Query: 24   GEIVFKNLEEIEIYALPRLACLHNGKCTIKFPSLEILYTVGLCEMETFSHRILSLPKLKY 83
            G +VF+ L  + +Y LP L   + GKC ++FP L+ L+ +G  +M+TFS  ++  PKL  
Sbjct: 1037 GGVVFRGLRRVRLYWLPELVSFYGGKCRVRFPKLDRLFILGCPKMKTFSRGVVVTPKLDI 1096

Query: 84   MGIEKCEFQISPGQDINVIIR 105
            + I+   F+++    +N  IR
Sbjct: 1097 VRIDVRYFEVAVDGGVNETIR 1117

[Close]
BLAST of MELO3C035075.2 vs. NCBI nr
Match: PNS23074.1 (hypothetical protein POPTR_T092600v3 [Populus trichocarpa])

HSP 1 Score: 64.7 bits (156), Expect = 3.1e-07
Identity = 35/104 (33.65%), Postives = 57/104 (54.81%), Query Frame = 0 

Query: 25   EIVFKNLEEIEIYALPRLACLHNGKCTIKFPSLEILYTVGLCEMETFSHRILSLPKLKYM 84
            E++F  L+ + +  LPRLA  H G C IK PSLE +      +M+TFS  ++S PKL+ +
Sbjct: 1826 EVMFHKLKHLALVCLPRLASFHLGYCAIKLPSLECVLVQECPQMKTFSQGVVSTPKLRKV 1885

Query: 85   GIEKCEFQISPGQDINVIIRTRF----QIILTTKYLTLSIQPTK 125
              ++    +    D+N  I   F     I++ +K L+L  +PT+
Sbjct: 1886 VQKEFGDSVHWAHDLNATIHKLFIEMSDIVVQSKLLSLPNEPTQ 1929

[Close]
BLAST of MELO3C035075.2 vs. TrEMBL
Match: tr|A0A0A0LNF6|A0A0A0LNF6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G432260 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.5e-17
Identity = 46/63 (73.02%), Postives = 50/63 (79.37%), Query Frame = 0 

Query: 23  NGEIVFKNLEEIEIYALPRLACLHNGKCTIKFPSLEILYTVGLCEMETFSHRILSLPKLK 82
           NGEIVFK+L+EI +Y LPRLA   NGKCTIKFPSLE+LY  G  EMETFSH ILS PKLK
Sbjct: 40  NGEIVFKHLKEIILYGLPRLASFDNGKCTIKFPSLEVLYIYGSYEMETFSHGILSFPKLK 99

Query: 83  YMG 86
             G
Sbjct: 100 SHG 102

[Close]
BLAST of MELO3C035075.2 vs. TrEMBL
Match: tr|B9NCL4|B9NCL4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_T092600v3 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.1e-07
Identity = 35/104 (33.65%), Postives = 57/104 (54.81%), Query Frame = 0 

Query: 25   EIVFKNLEEIEIYALPRLACLHNGKCTIKFPSLEILYTVGLCEMETFSHRILSLPKLKYM 84
            E++F  L+ + +  LPRLA  H G C IK PSLE +      +M+TFS  ++S PKL+ +
Sbjct: 1826 EVMFHKLKHLALVCLPRLASFHLGYCAIKLPSLECVLVQECPQMKTFSQGVVSTPKLRKV 1885

Query: 85   GIEKCEFQISPGQDINVIIRTRF----QIILTTKYLTLSIQPTK 125
              ++    +    D+N  I   F     I++ +K L+L  +PT+
Sbjct: 1886 VQKEFGDSVHWAHDLNATIHKLFIEMSDIVVQSKLLSLPNEPTQ 1929

[Close]
BLAST of MELO3C035075.2 vs. TrEMBL
Match: tr|A0A2K1R715|A0A2K1R715_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_T092600v3 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.1e-07
Identity = 35/104 (33.65%), Postives = 57/104 (54.81%), Query Frame = 0 

Query: 25   EIVFKNLEEIEIYALPRLACLHNGKCTIKFPSLEILYTVGLCEMETFSHRILSLPKLKYM 84
            E++F  L+ + +  LPRLA  H G C IK PSLE +      +M+TFS  ++S PKL+ +
Sbjct: 1826 EVMFHKLKHLALVCLPRLASFHLGYCAIKLPSLECVLVQECPQMKTFSQGVVSTPKLRKV 1885

Query: 85   GIEKCEFQISPGQDINVIIRTRF----QIILTTKYLTLSIQPTK 125
              ++    +    D+N  I   F     I++ +K L+L  +PT+
Sbjct: 1886 VQKEFGDSVHWAHDLNATIHKLFIEMSDIVVQSKLLSLPNEPTQ 1929

[Close]
BLAST of MELO3C035075.2 vs. TrEMBL
Match: tr|A0A2K1R718|A0A2K1R718_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_T092600v3 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.1e-07
Identity = 35/104 (33.65%), Postives = 57/104 (54.81%), Query Frame = 0 

Query: 25   EIVFKNLEEIEIYALPRLACLHNGKCTIKFPSLEILYTVGLCEMETFSHRILSLPKLKYM 84
            E++F  L+ + +  LPRLA  H G C IK PSLE +      +M+TFS  ++S PKL+ +
Sbjct: 1826 EVMFHKLKHLALVCLPRLASFHLGYCAIKLPSLECVLVQECPQMKTFSQGVVSTPKLRKV 1885

Query: 85   GIEKCEFQISPGQDINVIIRTRF----QIILTTKYLTLSIQPTK 125
              ++    +    D+N  I   F     I++ +K L+L  +PT+
Sbjct: 1886 VQKEFGDSVHWAHDLNATIHKLFIEMSDIVVQSKLLSLPNEPTQ 1929

[Close]
BLAST of MELO3C035075.2 vs. TrEMBL
Match: tr|A0A2P4L3W2|A0A2P4L3W2_QUESU (Disease resistance protein OS=Quercus suber OX=58331 GN=CFP56_48961 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.7e-07
Identity = 34/85 (40.00%), Postives = 50/85 (58.82%), Query Frame = 0 

Query: 25   EIVFKNLEEIEIYALPRLACLHNGKCTIKFPSLEILYTVGLCEMETFSHRILSLPKLKYM 84
            EI F  L  + +  LP L     G  TIKFPSLE L   G  EM+ FS+ +LS+PKLK +
Sbjct: 1044 EICFNQLNYLYLEDLPSLRSFDLGNHTIKFPSLEDLVVTGCLEMKIFSNGVLSMPKLKRI 1103

Query: 85   GIEKCEF-----QISPGQDINVIIR 105
            G+++ E+     ++ P +D+N  I+
Sbjct: 1104 GLDENEWWPMRRELLPEEDVNSAIK 1128

The following BLAST results are available for this feature:
BLAST of MELO3C035075.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011659043.12.0e-2572.41PREDICTED: probable disease resistance protein At4g27220 [Cucumis sativus][more]
KGN63358.19.8e-1773.02hypothetical protein Csa_2G432260 [Cucumis sativus][more]
XP_011650060.19.8e-1773.02PREDICTED: uncharacterized protein LOC105434705 [Cucumis sativus][more]
XP_022944432.11.1e-0734.57probable disease resistance protein At4g27220 [Cucurbita moschata][more]
PNS23074.13.1e-0733.65hypothetical protein POPTR_T092600v3 [Populus trichocarpa][more]
BLAST of MELO3C035075.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C035075.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C035075.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LNF6|A0A0A0LNF6_CUCSA6.5e-1773.02Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G432260 PE=4 SV=1[more]
tr|B9NCL4|B9NCL4_POPTR2.1e-0733.65Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_T092600v3 PE=3 S... [more]
tr|A0A2K1R715|A0A2K1R715_POPTR2.1e-0733.65Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_T092600v3 PE=3 S... [more]
tr|A0A2K1R718|A0A2K1R718_POPTR2.1e-0733.65Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_T092600v3 PE=3 S... [more]
tr|A0A2P4L3W2|A0A2P4L3W2_QUESU2.7e-0740.00Disease resistance protein OS=Quercus suber OX=58331 GN=CFP56_48961 PE=3 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0043531 ADP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C035075.2.1MELO3C035075.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33463FAMILY NOT NAMEDcoord: 22..108
NoneNo IPR availablePANTHERPTHR33463:SF6SUBFAMILY NOT NAMEDcoord: 22..108

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C035075.2Silver-seed gourdcarmedB0357
MELO3C035075.2Silver-seed gourdcarmedB0855
MELO3C035075.2Cucumber (Chinese Long) v3cucmedB440
MELO3C035075.2Watermelon (97103) v2medwmbB097
MELO3C035075.2Wax gourdmedwgoB138
MELO3C035075.2Cucumber (Gy14) v2cgybmedB386
MELO3C035075.2Cucumber (Gy14) v1cgymedB175
MELO3C035075.2Cucurbita maxima (Rimu)cmamedB637
MELO3C035075.2Cucurbita moschata (Rifu)cmomedB624
MELO3C035075.2Cucurbita pepo (Zucchini)cpemedB795
MELO3C035075.2Wild cucumber (PI 183967)cpimedB436
MELO3C035075.2Cucumber (Chinese Long) v2cumedB427
MELO3C035075.2Watermelon (Charleston Gray)medwcgB101
MELO3C035075.2Watermelon (97103) v1medwmB115