MELO3C013570.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCTCTTCCAAAAACTCTACCTTTAGTCCTATTCCTTTCACCTCTCTTTCTCTCTTTTTCTCTACTTTCAATCATAATTATTGTTTTTTATTTTAAAAATTTTCTTCCTCTTTTATAATGATCATCAACTGATCATCAACCTATATTATTATTCAACCAAAAAGAAGAGGAAAAATAAGAAACAAGAAGAAGAAGAATATGTCCGGTGAAGGAGTGGTAGGAGATCGCTCCAGCAAAGAATATGGAGAAGGATCGTCGAACTCACCACCAACGGCTACAACCCCAAGTCGTTACGAGTCACAAAAACGGCGAGATTGGAACACGTTTGGGCAATACTTGAAGAATCAAAGGCCGCCAGTGGCACTATCTCAATGCAACTTCAACCATGTATTGGAGTTTTTAAGGTACTTGGATCAATTTGGGAAGACAAAAGTTCATGTACAAGGTTGTATGTTTTACGGTCAGCCAGAACCACCTGCCCCTTGTACCTGCCCGTTAAAACAAGCTTGGGGTAGCCTTGATGCTTTAATAGGGAGATTAAGGGCGGCTTATGAAGAAAACGGTGGTTCCCCTGAAACTAATCCTTTTGCAAGTGCTTCTATAAGGGTTTATTTAAGAGAAGTTAGAGAATGTCAAGCTAAAGCAAGAGGAATTCCTTATAAGAAGAAGAAGAAGAGCAATAAACAACAACAACCAACAAATAATAATAATACCAATAATCTTCTTATTGATGATTCTACTACTACTAATAATATTTCCTCTTCTTCTTCTTCCTCCATTATGCACTTCTCAACTCCTTGAACAACTTCATCACTACTTCAATTTTATGATATCTTCATCAATTTCTTCCCCATCATCACATCGATATTATGGTAATTTTCTTACCTGATCTCTCTTTAATTATTTGTTTTTTATTTATTTCCTATGATGGAATGATTCTATTTCGATATATGGAAATTTTCATTGATGGTTGATTAAGAAGAATAAATTGTTATTCGAGTTTTTTATGTTTTTATTTTCTAAATCTAGGTTTGTATGTGTTATACACTATGTGTTTTATCAAATTTTATTATGCGGTGTGTTTATCTTTCTAATTTAATAGGGTAGAAGTATTTAAAATACAAAGCTCATAATTACACTCATTAATAGTACATCATATATCGGTTGAGTTATATGTTTGTTTTTTTATAATAACTCAACAAGGCTAGATTTCATTCTTAATTTTTCTATGAAAACATGTGATAGTTGGAAATTGTTTTTCTCTGCCAAAGCTTTGCTTTTGTATAATGCACATGACATAATACTAATAATACATCATTTGATCTTGTTGTAGTGTTTTTTTTTTTTTTCATTGAATGATTTTGTATTATAAGTATTGATTAATTTAATTATGGTGATCACCATTCGTAGAATTATTTGAGAGAATAATCATATAAAAGTATAATAAATCGTGCAACAATACTTGTTTGAACATCGTACAGATTCCTAATGTGTTTTCAGTGAATTATTTAGACAACAAATTGCAGTTTTAAATTTGTGATTTCTATAGAGTTCTTTTGAGATTCTTTCTATGTAGATAGTGCACTGACTAATGGTCATGTCAGATATATGTAATTCACTTTTTCTTTTTTTTTTCTTTTTTTTTAAATCGTATCAAATTCATATAAATAAAATTATGTGCTTTTCTTTAATAAAGAAGTGGGGTTAGGAATTTTTTTCAAAAACCAGAGGGAAATTGTTTTATCATTTAACTGAATTTTATTAGTTAAATTCGGTGCAAATCGAGTCGTAATTGATATTTTGTTTTATAATCATTTAGGACTCCATTTTTTCCTAATATATATATTTTCATCTTTTTTTAAGAGAATGTTTGATTTCATAATCAAATTTTGATACAAAAAGTTTTTCAAAACTATTTCAAAATATTTTTTTAAAAAAAAAGACGATTAGCTTAAAGTTTAAAAATTTTTGCAGAAAGAGGTAAGGAAAAATAAAGAAATTCACAAGTTGAAATCATCTTCACAATTTTAAATTTTAAAACATCAACCCAAGTTTTAACTTTTTTCCTTGTTGTCTTTAAATTTTGAAACTTAAATTTATAACCCTACTTCCACTTTTATATATATATATATATATATTTTGTCGTTTGAATCTTGGAATACTTAAAAAAAATATATATATTTTTTAATACTCAACTAATAATTCAAATTTAAAAGAGTATTTGTAACAGTTAAACGAGCACATTTTTCAAATGCTAGAGGTGATACTTAAAATTTTGTTCATGGTAAACTTATACTCGATTTTTTTATAAATTGGGTACTTTTGTTCTAAGAAGTAAATTGTTTGGTTCTTTTTTATTTTTAAAAATTCCAAAAGTTAATTTGAAGGGTTTTGTTTTAACATGCTTTTTTGGTTAACCCCTTTGTTAATTTTCTCTTCGTTTTCCCTCCCCTCCCATCTGATCAATTATGATTATTTTATTAATTACACCAATTATCAACCACACCTCATCATTCTCTATAGAATCTCTCGAGTATTGTCCACGAAGAGAGAGACCCATTTGGTCTTTAAAAAAGATATCAGTCTGCTTTTCAATTTTATTTAGATCTTCTAATTATTTTTCTAAACAATAAACTTCAATTCTCTAACAAGCTTTAATAATTATCTCAACGCGATTGACATGTATTTTATTCTAAATATACGAAAATATTAATCTTCTATTTCTATAACTATTGTGTTACCTAGATAAAACATCTAACTTTTCTTTTAAGTAGATTTGGTGGTTCGTCTGAAGTTGGATTTTGGTGGGATAGTAAGTTTTTTTTATTTTCCCATTTCATCAAACATATGATATATTGATTGGTTTTTATGTCTCAAAATTTATACATAAAAATATATTTTCCCCATTTGGGGAGAGATCAGTTAGGTAAAAAGCCTTGTACTTTGTGCTTCCCATTTTACTTCATTCATATGTTTAATTTCAACGCAAATATGTCTTTCCTTTGTACAACTTTGCCCTAAACTCGCACATGTTCTAGTCGGCCTACCTCATAGGGAAGTCCAAAATTATTATTGTTTTTTTTCCTCTTATTATTATTATATTTCAAATTGAATTTTTTCTGTCTTTTTAACTATCTATTTCTGGTAAAGAAAAATAAACCCTTGAATAGAGTGATCAAAATTAAAATTTTATTTATTTGTTCTTCCCAAATGCTTGTTTTTAGCTACCCTTATATATATTATTTCTTCACTTTCTACACGTGCAATTTCCTTTTTATAATTGCATATATATATTTATAATTTATATGTATATATGTATGTATTTTTGGGGTTTGTGAGTTACATTACATATATATATTCCATTGGAAAAACTTTTCACAAGACATTCTTGGCTGTCTCTCCTTCTTGGCTTCAATTTCCAAGGATGCCATATGTCTCTAAGTATATTAATTAAATATATTTCAAGTGAACTATTTTGACCTTTCTTTTTTTTCTCTCCCACTAGTTTCTAACCCTATTTTTGCAAAATGTTTTTAGGGAGAGAGGACAAAAACTTCTATTGAGCAGCATTATTTTATATTAATTAGTAGAGATATCTTTGGATGACTCAAATTTTTCTAATGGGTAATTTGAGAAGTTATTGGTGTGAGTTTAAAAATGAGAAGAAGCTAGAATAGAAGTAATTAATTGCATTTCGGAAGGATGGAACCATTTAGGGTTTTCTTTTTATGTATGTTGTATATATATTTGTATATATTGGAATTGTTTATATATTGAACTTTCATTGTATGATTATTTTGGTAAACTCTATTACAGAGAGTGGAATTTTGATAAGTTGTAATTTGAATCGAACACGCACTATAATTTGAACTGTAGTTTGACATTTATTTTGGATTATTTGTTTTAAAAAAGTTCTCAACTATATATGGTTGTTCAACTTTCTCCACTAAAAATTTAGTGGTAATATGTCTTATCTTATGAATATTCTACCATTTATAAAAAAAATTTAATATAATAATTGTGGAATGTGAAGTTTGTCTTTTAAAAAAAGAAGTTGATATATACCTAAACTATTAAGATATGTTAGGTCAATATATTAAGTCTAGTTTGAAACACTTTCACATTTACATTTGATTATGAAATAACTATTTTTGAAATTTCCTTATTCAACATCAAATTATTGTTCGTTTTGTTTTCGTGTAATTTGTTTTTGCATTCTAACTCTATGAACAACCGATGAACAAAATTTAATTTTCAATATTTGAATGCAGGACAAAACCTTTGGAGCAAAAGAACCAAAGAGAACTTAATGAAATATATTCAAAAGCAGAAATGTATTGAAAAGGTTGAAACTTTGAAGTTGTTTTTCCCCTTTCCCCCTTCCTTTTTTTGTTTTTCTTCCTCTCTGCAATATCACATTTGGGAAATCTATATATTAAGTTTGTGTACACAACTGCTATATACAGCCATATGCATGTCCCCTTATTACATTTGTTGCTTCTCTCTTCTTTTTTCTTTTCCCTAAGATTTTATTATATATTTCATGAGTTCCGATGTCATATTGTTAAAGTATTGATATTATAGTTAAGTTTATCGTTAGTTATTAGCCTGTGCTTTTGAATTCATTGATAATTTAACAAATGATATATCAAATGTAAAGTTTCTATATATATCGAAGTTTCTATATGTTGCGGC TCCTCTTCCAAAAACTCTACCTTTAGTCCTATTCCTTTCACCTCTCTTTCTCTCTTTTTCTCTACTTTCAATCATAATTATTGTTTTTTATTTTAAAAATTTTCTTCCTCTTTTATAATGATCATCAACTGATCATCAACCTATATTATTATTCAACCAAAAAGAAGAGGAAAAATAAGAAACAAGAAGAAGAAGAATATGTCCGGTGAAGGAGTGGTAGGAGATCGCTCCAGCAAAGAATATGGAGAAGGATCGTCGAACTCACCACCAACGGCTACAACCCCAAGTCGTTACGAGTCACAAAAACGGCGAGATTGGAACACGTTTGGGCAATACTTGAAGAATCAAAGGCCGCCAGTGGCACTATCTCAATGCAACTTCAACCATGTATTGGAGTTTTTAAGGTACTTGGATCAATTTGGGAAGACAAAAGTTCATGTACAAGGTTGTATGTTTTACGGTCAGCCAGAACCACCTGCCCCTTGTACCTGCCCGTTAAAACAAGCTTGGGGTAGCCTTGATGCTTTAATAGGGAGATTAAGGGCGGCTTATGAAGAAAACGGTGGTTCCCCTGAAACTAATCCTTTTGCAAGTGCTTCTATAAGGGTTTATTTAAGAGAAGTTAGAGAATGTCAAGCTAAAGCAAGAGGAATTCCTTATAAGAAGAAGAAGAAGAGCAATAAACAACAACAACCAACAAATAATAATAATACCAATAATCTTCTTATTGATGATTCTACTACTACTAATAATATTTCCTCTTCTTCTTCTTCCTCCATTATGCACTTCTCAACTCCTTGAACAACTTCATCACTACTTCAATTTTATGATATCTTCATCAATTTCTTCCCCATCATCACATCGATATTATGGACAAAACCTTTGGAGCAAAAGAACCAAAGAGAACTTAATGAAATATATTCAAAAGCAGAAATGTATTGAAAAGGTTGAAACTTTGAAGTTGTTTTTCCCCTTTCCCCCTTCCTTTTTTTGTTTTTCTTCCTCTCTGCAATATCACATTTGGGAAATCTATATATTAAGTTTGTGTACACAACTGCTATATACAGCCATATGCATGTCCCCTTATTACATTTGTTGCTTCTCTCTTCTTTTTTCTTTTCCCTAAGATTTTATTATATATTTCATGAGTTCCGATGTCATATTGTTAAAGTATTGATATTATAGTTAAGTTTATCGTTAGTTATTAGCCTGTGCTTTTGAATTCATTGATAATTTAACAAATGATATATCAAATGTAAAGTTTCTATATATATCGAAGTTTCTATATGTTGCGGC ATGTCCGGTGAAGGAGTGGTAGGAGATCGCTCCAGCAAAGAATATGGAGAAGGATCGTCGAACTCACCACCAACGGCTACAACCCCAAGTCGTTACGAGTCACAAAAACGGCGAGATTGGAACACGTTTGGGCAATACTTGAAGAATCAAAGGCCGCCAGTGGCACTATCTCAATGCAACTTCAACCATGTATTGGAGTTTTTAAGGTACTTGGATCAATTTGGGAAGACAAAAGTTCATGTACAAGGTTGTATGTTTTACGGTCAGCCAGAACCACCTGCCCCTTGTACCTGCCCGTTAAAACAAGCTTGGGGTAGCCTTGATGCTTTAATAGGGAGATTAAGGGCGGCTTATGAAGAAAACGGTGGTTCCCCTGAAACTAATCCTTTTGCAAGTGCTTCTATAAGGGTTTATTTAAGAGAAGTTAGAGAATGTCAAGCTAAAGCAAGAGGAATTCCTTATAAGAAGAAGAAGAAGAGCAATAAACAACAACAACCAACAAATAATAATAATACCAATAATCTTCTTATTGATGATTCTACTACTACTAATAATATTTCCTCTTCTTCTTCTTCCTCCATTATGCACTTCTCAACTCCTTGA MSGEGVVGDRSSKEYGEGSSNSPPTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKSNKQQQPTNNNNTNNLLIDDSTTTNNISSSSSSSIMHFSTP
BLAST of MELO3C013570.2.1 vs. NCBI nr
Match: XP_008448236.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo] >XP_016900524.1 PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo]) HSP 1 Score: 327.4 bits (838), Expect = 3.4e-86 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. NCBI nr
Match: XP_004150559.2 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis sativus] >KGN47252.1 hypothetical protein Csa_6G236080 [Cucumis sativus]) HSP 1 Score: 310.5 bits (794), Expect = 4.3e-81 Identity = 146/155 (94.19%), Postives = 150/155 (96.77%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. NCBI nr
Match: XP_022149714.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Momordica charantia]) HSP 1 Score: 286.6 bits (732), Expect = 6.6e-74 Identity = 137/155 (88.39%), Postives = 141/155 (90.97%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. NCBI nr
Match: XP_010104392.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Morus notabilis] >EXC00237.1 hypothetical protein L484_010344 [Morus notabilis]) HSP 1 Score: 275.0 bits (702), Expect = 2.0e-70 Identity = 127/143 (88.81%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. NCBI nr
Match: XP_012075501.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Jatropha curcas] >XP_020536007.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Jatropha curcas] >KDP35079.1 hypothetical protein JCGZ_11031 [Jatropha curcas]) HSP 1 Score: 270.8 bits (691), Expect = 3.8e-69 Identity = 129/148 (87.16%), Postives = 135/148 (91.22%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. TAIR10
Match: AT2G42610.1 (Protein of unknown function (DUF640)) HSP 1 Score: 260.8 bits (665), Expect = 7.1e-70 Identity = 122/143 (85.31%), Postives = 128/143 (89.51%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. TAIR10
Match: AT1G07090.1 (Protein of unknown function (DUF640)) HSP 1 Score: 223.8 bits (569), Expect = 9.6e-59 Identity = 102/140 (72.86%), Postives = 121/140 (86.43%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. TAIR10
Match: AT4G18610.1 (Protein of unknown function (DUF640)) HSP 1 Score: 221.1 bits (562), Expect = 6.2e-58 Identity = 110/162 (67.90%), Postives = 127/162 (78.40%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. TAIR10
Match: AT3G23290.2 (Protein of unknown function (DUF640)) HSP 1 Score: 219.2 bits (557), Expect = 2.4e-57 Identity = 97/126 (76.98%), Postives = 112/126 (88.89%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. TAIR10
Match: AT1G78815.1 (Protein of unknown function (DUF640)) HSP 1 Score: 218.8 bits (556), Expect = 3.1e-57 Identity = 97/126 (76.98%), Postives = 110/126 (87.30%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. Swiss-Prot
Match: sp|Q9S7R3|LSH10_ARATH (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=LSH10 PE=1 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 1.3e-68 Identity = 122/143 (85.31%), Postives = 128/143 (89.51%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. Swiss-Prot
Match: sp|Q9LMK2|LSH6_ARATH (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LSH6 PE=1 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 1.7e-57 Identity = 102/140 (72.86%), Postives = 121/140 (86.43%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. Swiss-Prot
Match: sp|A2XED8|G1L7_ORYSI (Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 5.0e-57 Identity = 97/126 (76.98%), Postives = 113/126 (89.68%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. Swiss-Prot
Match: sp|Q941W1|G1L7_ORYSJ (Protein G1-like7 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L7 PE=1 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 5.0e-57 Identity = 97/126 (76.98%), Postives = 113/126 (89.68%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. Swiss-Prot
Match: sp|Q9SN52|LSH9_ARATH (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 OS=Arabidopsis thaliana OX=3702 GN=LSH9 PE=1 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.1e-56 Identity = 110/162 (67.90%), Postives = 127/162 (78.40%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. TrEMBL
Match: tr|A0A1S4DX19|A0A1S4DX19_CUCME (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucumis melo OX=3656 GN=LOC103490491 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 2.2e-86 Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. TrEMBL
Match: tr|A0A0A0KFP9|A0A0A0KFP9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G236080 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 2.8e-81 Identity = 146/155 (94.19%), Postives = 150/155 (96.77%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. TrEMBL
Match: tr|W9RWI7|W9RWI7_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_010344 PE=4 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 1.3e-70 Identity = 127/143 (88.81%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. TrEMBL
Match: tr|I1LUM7|I1LUM7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100802937 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 2.5e-69 Identity = 129/149 (86.58%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of MELO3C013570.2.1 vs. TrEMBL
Match: tr|A0A067KTB1|A0A067KTB1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11031 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 2.5e-69 Identity = 129/148 (87.16%), Postives = 135/148 (91.22%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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