MELO3C013543.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTTGCCAAGCATAATACAACTGAAGCCCATCTGGCTCAGGTTGAAAATCGACTCAAAAACTGGTCTATCCCAAAATTAGAGGCCAACCAAGTGTATAAAATCAATACCTTCAATTTTTCTCAGCAACACGTCATCGTCATTACTGAAGAAAACGTGGCAATGAAAGATGAATTGACTGCTATCAAACTCTTACCTAAAGAAACTCTCTTCAAAGTCAAAGAAAAGTTCAAGTACCTTCATATAGGATGTGTACAAGTTGCCTTAAAACCTCTCTTTAGAGAAGGGTTAGATGTTCTTGTCTACCTTGCTCTAAGAGACAAGAGGCATCTTAGATTTACTCCCTCTCTCCTAGGGATCGTCCAATCAAATCTGGAGCAAGGACCAGTATATTTCAACTGCAGACCAGGCCTCACTGTCTCTCTTCAAGATAAAAACATCATGGATACCATAAGCCTTGATGTTCACTCTCAAGGACTTGAGCTAAAGGATGGTTCGCTACCTTTTGCAGTCTCATATCGCATCTACTTCAAATCGATGCATACAAATCTCTCTCCAAACTGATGCAGACCAGGCCTCACCCAGTGCTTTTGGAGAGAGATCCAAAAAAAGGCACCAGACGTGA ATGGCTCTTGCCAAGCATAATACAACTGAAGCCCATCTGGCTCAGGTTGAAAATCGACTCAAAAACTGGTCTATCCCAAAATTAGAGGCCAACCAAGTGTATAAAATCAATACCTTCAATTTTTCTCAGCAACACGTCATCGTCATTACTGAAGAAAACGTGGCAATGAAAGATGAATTGACTGCTATCAAACTCTTACCTAAAGAAACTCTCTTCAAAGTCAAAGAAAAGTTCAAGTACCTTCATATAGGATGTGTACAAGTTGCCTTAAAACCTCTCTTTAGAGAAGGGTTAGATGTTCTTGTCTACCTTGCTCTAAGAGACAAGAGGCATCTTAGATTTACTCCCTCTCTCCTAGGGATCGTCCAATCAAATCTGGAGCAAGGACCAGTATATTTCAACTGCAGACCAGGCCTCACTGTCTCTCTTCAAGATAAAAACATCATGGATACCATAAGCCTTGATGTTCACTCTCAAGGACTTGAGCTAAAGGATGACCAGGCCTCACCCAGTGCTTTTGGAGAGAGATCCAAAAAAAGGCACCAGACGTGA ATGGCTCTTGCCAAGCATAATACAACTGAAGCCCATCTGGCTCAGGTTGAAAATCGACTCAAAAACTGGTCTATCCCAAAATTAGAGGCCAACCAAGTGTATAAAATCAATACCTTCAATTTTTCTCAGCAACACGTCATCGTCATTACTGAAGAAAACGTGGCAATGAAAGATGAATTGACTGCTATCAAACTCTTACCTAAAGAAACTCTCTTCAAAGTCAAAGAAAAGTTCAAGTACCTTCATATAGGATGTGTACAAGTTGCCTTAAAACCTCTCTTTAGAGAAGGGTTAGATGTTCTTGTCTACCTTGCTCTAAGAGACAAGAGGCATCTTAGATTTACTCCCTCTCTCCTAGGGATCGTCCAATCAAATCTGGAGCAAGGACCAGTATATTTCAACTGCAGACCAGGCCTCACTGTCTCTCTTCAAGATAAAAACATCATGGATACCATAAGCCTTGATGTTCACTCTCAAGGACTTGAGCTAAAGGATGACCAGGCCTCACCCAGTGCTTTTGGAGAGAGATCCAAAAAAAGGCACCAGACGTGA MALAKHNTTEAHLAQVENRLKNWSIPKLEANQVYKINTFNFSQQHVIVITEENVAMKDELTAIKLLPKETLFKVKEKFKYLHIGCVQVALKPLFREGLDVLVYLALRDKRHLRFTPSLLGIVQSNLEQGPVYFNCRPGLTVSLQDKNIMDTISLDVHSQGLELKDDQASPSAFGERSKKRHQT
BLAST of MELO3C013543.2.1 vs. NCBI nr
Match: XP_016900528.1 (PREDICTED: uncharacterized protein LOC107990934 [Cucumis melo]) HSP 1 Score: 328.2 bits (840), Expect = 1.8e-86 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of MELO3C013543.2.1 vs. NCBI nr
Match: KGN65521.1 (hypothetical protein Csa_1G434190 [Cucumis sativus]) HSP 1 Score: 269.6 bits (688), Expect = 7.7e-69 Identity = 132/169 (78.11%), Postives = 148/169 (87.57%), Query Frame = 0
BLAST of MELO3C013543.2.1 vs. NCBI nr
Match: XP_016901152.1 (PREDICTED: uncharacterized protein LOC107991186 [Cucumis melo]) HSP 1 Score: 263.8 bits (673), Expect = 4.2e-67 Identity = 133/153 (86.93%), Postives = 143/153 (93.46%), Query Frame = 0
BLAST of MELO3C013543.2.1 vs. NCBI nr
Match: PHT26901.1 (hypothetical protein CQW23_33494 [Capsicum baccatum]) HSP 1 Score: 150.6 bits (379), Expect = 5.2e-33 Identity = 72/154 (46.75%), Postives = 105/154 (68.18%), Query Frame = 0
BLAST of MELO3C013543.2.1 vs. NCBI nr
Match: PHU04683.1 (Polyadenylate-binding protein RBP47B [Capsicum chinense]) HSP 1 Score: 150.2 bits (378), Expect = 6.8e-33 Identity = 71/154 (46.10%), Postives = 105/154 (68.18%), Query Frame = 0
BLAST of MELO3C013543.2.1 vs. Swiss-Prot
Match: sp|P09520|MVP_FMVD (Movement protein OS=Figwort mosaic virus (strain DxS) OX=10650 GN=ORF I PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.3e-08 Identity = 37/111 (33.33%), Postives = 58/111 (52.25%), Query Frame = 0
BLAST of MELO3C013543.2.1 vs. Swiss-Prot
Match: sp|Q91DM0|POLG_PVCV1 (Genome polyprotein OS=Petunia vein clearing virus (isolate Shepherd) OX=492094 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.9e-08 Identity = 31/90 (34.44%), Postives = 47/90 (52.22%), Query Frame = 0
BLAST of MELO3C013543.2.1 vs. Swiss-Prot
Match: sp|Q6XKE6|POLG_PVCV2 (Genome polyprotein OS=Petunia vein clearing virus (isolate Hohn) OX=492095 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.9e-08 Identity = 31/90 (34.44%), Postives = 47/90 (52.22%), Query Frame = 0
BLAST of MELO3C013543.2.1 vs. Swiss-Prot
Match: sp|Q02968|MVP_CAMVE (Movement protein OS=Cauliflower mosaic virus (strain BBC) OX=31556 GN=ORF I PE=3 SV=2) HSP 1 Score: 52.4 bits (124), Expect = 6.3e-06 Identity = 31/97 (31.96%), Postives = 49/97 (50.52%), Query Frame = 0
BLAST of MELO3C013543.2.1 vs. Swiss-Prot
Match: sp|Q00966|MVP_CAMVN (Movement protein OS=Cauliflower mosaic virus (strain NY8153) OX=31557 GN=ORF I PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 6.3e-06 Identity = 31/97 (31.96%), Postives = 49/97 (50.52%), Query Frame = 0
BLAST of MELO3C013543.2.1 vs. TrEMBL
Match: tr|A0A1S4DX30|A0A1S4DX30_CUCME (uncharacterized protein LOC107990934 OS=Cucumis melo OX=3656 GN=LOC107990934 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 1.2e-86 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of MELO3C013543.2.1 vs. TrEMBL
Match: tr|A0A0A0M024|A0A0A0M024_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G434190 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 5.1e-69 Identity = 132/169 (78.11%), Postives = 148/169 (87.57%), Query Frame = 0
BLAST of MELO3C013543.2.1 vs. TrEMBL
Match: tr|A0A1S4DYV2|A0A1S4DYV2_CUCME (uncharacterized protein LOC107991186 OS=Cucumis melo OX=3656 GN=LOC107991186 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 2.8e-67 Identity = 133/153 (86.93%), Postives = 143/153 (93.46%), Query Frame = 0
BLAST of MELO3C013543.2.1 vs. TrEMBL
Match: tr|A0A2G2V1L4|A0A2G2V1L4_CAPBA (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_33494 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 3.4e-33 Identity = 72/154 (46.75%), Postives = 105/154 (68.18%), Query Frame = 0
BLAST of MELO3C013543.2.1 vs. TrEMBL
Match: tr|A0A2G3BE08|A0A2G3BE08_CAPCH (Polyadenylate-binding protein RBP47B OS=Capsicum chinense OX=80379 GN=BC332_25505 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 4.5e-33 Identity = 71/154 (46.10%), Postives = 105/154 (68.18%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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