MELO3C013527.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C013527.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase
Location	chr11 : 16658567 .. 16661815 (-)
Sequence length	834

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCGAGATTGAACTAAAAATACTGGAATAAAAACGAAAAAAATTGGAAAAGAAAAAGGCGAAAGAAGCTTAAAACGACGTCGTCCGTCTATGCTTGTCATTGTCTATAAGCGCTCGGGTCTCTTTTTCTTGCTTTCGTTTCGCCGTATCAGCGTCAGTGATCTCTCTCTCTCTCTCTAGGGAAGAAAATCTGAATCCATGGCTACCTTAGCGGCTGCTGCAGTTCGTCAAGCCAGAGCCCTAGCTCGAGTTTCCTCGCCTCAGTCAACCGCCAACCTTATTCACAAGCGCGGACTCGCTGGCGCTGCCGGTAGGTTTCATCTCCCGATCTCATTTTTATAAATTTAGGTCATCTGCTTGGACTTATTTCATTTTCGGGTTTGTTCAATCTTCTTTGGTTTCTAATGTTTTTGGAGTTTAATTTTAAAATGGGAATCATGGTTATATTTTTTTCCCCCAAGTTCTGTTTTTAGATTTGGCTCTTTATTATTTTCACGGATTGAAAAGGTGCGAATTTTTTGGTTTTTTGTTAATGCATTTTACGTACTTAGACAACCCAGATTTTTGGTTGGGTTATTTCACTATTATTCTTAGATAACGAAGGTTGTGGTCTTGTGTCTATAATCGAAATGGATATGAAGCAAACTGAGCTCTGGCAATTTGACCTCAATTTGGCAACGGAATTCAAAGATATGGGAATTTGGAACTTGTATTTTTCTGGCATATTGTTACATTATCAATTGTATCAACTGGGGACTGTTGCTATAGCCTCAATGGTGAAATTTGAATAAGGAAACATTGGTAGATTGAAATACAATGAAGACTTATGAATAACAATCACAATGAAAAATGCAGGCATTGCATTATTACTTGCACTTCACCACTTCGTTGACTGTGTGATGAAGATCGTTGTTACGATTTAAAAGCATTGTAATTTGCATGGGGTCTTCTTAGCTGAACCCCTTTCTCTAGTGGGGTTTTGGTGGATATTTTTTTAATACTCCAGTATTCTTTCATTTTCTTTGCAATGAAAGCAGTTGTTACTACCATAATAAATTTGCTTAACTAATCTGAATGTTATATGTCGACACCACACATTAATACACCTGTCATGTAGTAAGGATATTTCACTGAATGGAACATAGAAGACCGCCTTTCTACAGTACAAGACAGTCAGCTGATGATTAGTAAAATTACTCGTACCGGGTTATTTAGTTTTCTTTAAATTTCAACTTCGGGAGTTACAAGACTACACTCTCTACACATGGATTTGAATTCTGCATGTTTCTTTTGTAATGTTTGTTGTGGGAGAATGAAACATCAAAAGATGAATAAATAACCTTTTTCCTTTTCTTTTAACTTTGACCTTCTTTGTTGATATTTGCAGACCACCATGGACCCCCGAAGGTTAACTGTTGGCAAGATCCCATGAGCCCATCTAAGTGGAAGGAAGAGCACGTGAGACTTATTTTTTTCATATGAGGCTACTGGCTTCATTTCTTCGTTCTTCTATTTTTCAGTCTTCTTATTTTTTGTTCTTCCTATTTGCTCTCATCAAGTAGGAGGATTTAAGAACGATAAGTCAGAAGTTAACCTGTTTAGACTATCAGAATCTGTTAAATTTCTAATCAACTCAACAAAGTACGTGGTTTTGTTTTTTAAGAGTTCTTTTTGTACTCCATATTTAATGTAGTTTCATCAATATAAGTCACTTATAGTGTTGTATTAGATTAGTTCTATTTATTTGTCTATGGTTTGGAATTTGTGGGTTCAACTTAGAGCTAATGCAGCTGTTTGTCTCACTGTATTAGCTTTCAATAGACTTCAAAATCGAAAATTCTTCTACCTTAAATTAGTTAGTTTTGCTTTGACACTTCTGAGTCATATAATGCCCTCTTCTCCTTGGGCGTTCTTTTAGTAATGCAGAACTGATAAACAATGAATGCCCTCTTCTTTCAAGTGTTCTTGACTTAGAGAATAAATAATGAATAACAATGGCCTAATTATCACACTTGTGCCATCTTTAATATCTAGCTGTCTCTTCTTGTCTCTTTCAAACAATATTTACCATGAACTAATTGAACTTGTTCTGAATTTTGCAGTTCGTGCTTGTATCTCTATCAGGATGGGGCGTGCTCATCTTTGGAGGGTACAAGTTCTTCACCAGGGGAAAAGGAAATAAGGATGAGGTACTTCCACACTTTGTTTTCTATGCGCCTTTTACAGTTAAAACCACTTGCAGTTATTTACAGATGATGAAATGTAATGGCAGTTATGGGTCAGTTTTGAGCTGTTTACAATATCAACTTCTGTGAACAATTTGTTTATACCTTTTATTTTTGAGGAGGGAATGGCACCTTTAAAGTTTTAGATTTGTGCTTTCCTTGGTTTTTACTTTTATTTTAAGTCTATACATTTGGCAAATTCTGCATCAGCCTGTAATGTGAAATGAAGTTGGGAAATGTTGATATCTCCTGCAATATTCTGGAGTACTAATACATGAAAACATAATATGAGGTTTAGAATTTCGGTTCAGAGAAAATATATTCTATTTTGAGGCTTCTTTTGTTGCTTTCTTGGCAAGGCCGTCATATTATGAGGTGAACTGAGGAGTAATACGATCATTACCTTGGGGCTCGGATGGAGAATGAAAAACATTTACCTGATTTGTCTTTTTTGAATAACATTTCATGGTTTTATCGTCTGCTTTTGTAAGTCTAGTTTTATGGATCATTTGGGTCACAATTATACATGGAGTATTTGAAACTCATAGCTGGATGTAGCTGTCATAGTGTACCGCCTAGATCAATCATAAACGAACTTGCACATTTATTTTTTCACACCGAGTTTTGTTCTCTCCTAATTTGTGTGCTTTCTTTGCAGAAAATTGTGGAAGCATCCCAATGAGCTGAGCTGCAGATATTTTCCGATTCTTCTAAAGTACTTCTCGTAATAATGTATTTCCTTGTACCTCATGTGCCAGCGAATTTCATTTCAATCTGGAATTGTATCTCAGACTAGTATATGGGCTTATCTTGTAGCTTTTTCTTGACGTTTTGGTTATTTCATGCACCGAAGTCCTACATCTAATAATACGAATTTACCATCATTTAAGCCCCCACAAACTCATTCATTGGATTTGAAGGAAGGGCATTTGTGGTTCGGAGTTTGTGATTGAACAAAGCATTTTTGAGTAATCAGTTAATTGCTATCTTTGGTGTCATTTTGTTAACGATTGGATCACTTGGT

mRNA sequence

ATTCGAGATTGAACTAAAAATACTGGAATAAAAACGAAAAAAATTGGAAAAGAAAAAGGCGAAAGAAGCTTAAAACGACGTCGTCCGTCTATGCTTGTCATTGTCTATAAGCGCTCGGGTCTCTTTTTCTTGCTTTCGTTTCGCCGTATCAGCGTCAGTGATCTCTCTCTCTCTCTCTAGGGAAGAAAATCTGAATCCATGGCTACCTTAGCGGCTGCTGCAGTTCGTCAAGCCAGAGCCCTAGCTCGAGTTTCCTCGCCTCAGTCAACCGCCAACCTTATTCACAAGCGCGGACTCGCTGGCGCTGCCGACCACCATGGACCCCCGAAGGTTAACTGTTGGCAAGATCCCATGAGCCCATCTAAGTGGAAGGAAGAGCACTTCGTGCTTGTATCTCTATCAGGATGGGGCGTGCTCATCTTTGGAGGGTACAAGTTCTTCACCAGGGGAAAAGGAAATAAGGATGAGAAAATTGTGGAAGCATCCCAATGAGCTGAGCTGCAGATATTTTCCGATTCTTCTAAAGTACTTCTCGTAATAATGTATTTCCTTGTACCTCATGTGCCAGCGAATTTCATTTCAATCTGGAATTGTATCTCAGACTAGTATATGGGCTTATCTTGTAGCTTTTTCTTGACGTTTTGGTTATTTCATGCACCGAAGTCCTACATCTAATAATACGAATTTACCATCATTTAAGCCCCCACAAACTCATTCATTGGATTTGAAGGAAGGGCATTTGTGGTTCGGAGTTTGTGATTGAACAAAGCATTTTTGAGTAATCAGTTAATTGCTATCTTTGGTGTCATTTTGTTAACGATTGGATCACTTGGT

Coding sequence (CDS)

ATGGCTACCTTAGCGGCTGCTGCAGTTCGTCAAGCCAGAGCCCTAGCTCGAGTTTCCTCGCCTCAGTCAACCGCCAACCTTATTCACAAGCGCGGACTCGCTGGCGCTGCCGACCACCATGGACCCCCGAAGGTTAACTGTTGGCAAGATCCCATGAGCCCATCTAAGTGGAAGGAAGAGCACTTCGTGCTTGTATCTCTATCAGGATGGGGCGTGCTCATCTTTGGAGGGTACAAGTTCTTCACCAGGGGAAAAGGAAATAAGGATGAGAAAATTGTGGAAGCATCCCAATGA

Protein sequence

MATLAAAAVRQARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHFVLVSLSGWGVLIFGGYKFFTRGKGNKDEKIVEASQ

Homology

[Close]

BLAST of MELO3C013527.2.1 vs. NCBI nr
Match: XP_008448206.1 (PREDICTED: uncharacterized protein LOC103490467 [Cucumis melo])

HSP 1 Score: 198.7 bits (504), Expect = 8.8e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MATLAAAAVRQARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60
          MATLAAAAVRQARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE
Sbjct: 1  MATLAAAAVRQARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60

Query: 61 HFVLVSLSGWGVLIFGGYKFFTRGKGNKDEKIVEASQ 98
          HFVLVSLSGWGVLIFGGYKFFTRGKGNKDEKIVEASQ
Sbjct: 61 HFVLVSLSGWGVLIFGGYKFFTRGKGNKDEKIVEASQ 97

[Close]

BLAST of MELO3C013527.2.1 vs. NCBI nr
Match: XP_022140380.1 (uncharacterized protein LOC111011068 [Momordica charantia])

HSP 1 Score: 184.1 bits (466), Expect = 2.2e-43
Identity = 87/97 (89.69%), Postives = 93/97 (95.88%), Query Frame = 0


Query: 1  MATLAAAAVRQARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60
          MATLAAAAVRQARAL RVSSPQSTA LIH+RGLAGAADHHGPPKVNCW+DPMSPSKWKEE
Sbjct: 1  MATLAAAAVRQARALTRVSSPQSTATLIHRRGLAGAADHHGPPKVNCWKDPMSPSKWKEE 60

Query: 61 HFVLVSLSGWGVLIFGGYKFFTRGKGNKDEKIVEASQ 98
          HFV+VSLSGWG+L FGGYKFFTRGKG K+EK+VEASQ
Sbjct: 61 HFVIVSLSGWGLLFFGGYKFFTRGKGKKEEKLVEASQ 97

[Close]

BLAST of MELO3C013527.2.1 vs. NCBI nr
Match: KGN46690.1 (hypothetical protein Csa_6G124050 [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 1.9e-42
Identity = 90/97 (92.78%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 1  MATLAAAAVRQARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60
          MATLAAAAVR ARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE
Sbjct: 1  MATLAAAAVRHARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60

Query: 61 HFVLVSLSGWGVLIFGGYKFFTRGKGNKDEKIVEASQ 98
          HFVLVSLSGW +LI GGYKFFTRGKG KDEK+ EASQ
Sbjct: 61 HFVLVSLSGWALLISGGYKFFTRGKG-KDEKLAEASQ 96

[Close]

BLAST of MELO3C013527.2.1 vs. NCBI nr
Match: XP_022944460.1 (uncharacterized protein LOC111448907 [Cucurbita moschata])

HSP 1 Score: 176.0 bits (445), Expect = 6.1e-41
Identity = 84/97 (86.60%), Postives = 88/97 (90.72%), Query Frame = 0


Query: 1  MATLAAAAVRQARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60
          MATLAAAA RQARAL RVSSPQS A LI +RGLAGAADHHGPPKVNCW DPMSPSKWKEE
Sbjct: 1  MATLAAAAARQARALTRVSSPQSAATLIQRRGLAGAADHHGPPKVNCWSDPMSPSKWKEE 60

Query: 61 HFVLVSLSGWGVLIFGGYKFFTRGKGNKDEKIVEASQ 98
          HFV+VSLSGWG+L FGGYKFFT GKG KDEK+VEASQ
Sbjct: 61 HFVIVSLSGWGLLFFGGYKFFTGGKGKKDEKLVEASQ 97

[Close]

BLAST of MELO3C013527.2.1 vs. NCBI nr
Match: XP_023532872.1 (uncharacterized protein LOC111794912 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.6 bits (436), Expect = 6.8e-40
Identity = 83/96 (86.46%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MATLAAAAVRQARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60
          MATLAAAAVRQARAL RVSSPQSTA LI +RGLAGAADHHGPPKVNCWQDPMSPSKWKEE
Sbjct: 1  MATLAAAAVRQARALTRVSSPQSTATLIQRRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60

Query: 61 HFVLVSLSGWGVLIFGGYKFFTRGKGNKDEKIVEAS 97
          HFV+VSLSGWG+L +GGYKFFT GKG KDEK V  S
Sbjct: 61 HFVIVSLSGWGLLFYGGYKFFTGGKGKKDEKPVATS 96

[Close]

BLAST of MELO3C013527.2.1 vs. TAIR10
Match: AT2G20820.2 (unknown protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-08
Identity = 27/61 (44.26%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 6  AAAVRQARALARVSSPQ---STANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEEHF 64
          A+  R+A +LA++ S +     A++  +R LAGAADHHG  KV+ W+ P +P  WKEEH+
Sbjct: 2  ASFARRAMSLAQIPSARISSGAASIGQRRCLAGAADHHGSTKVDFWKQPTNPGNWKEEHW 61

[Close]

BLAST of MELO3C013527.2.1 vs. TrEMBL
Match: tr|A0A1S3BJS2|A0A1S3BJS2_CUCME (uncharacterized protein LOC103490467 OS=Cucumis melo OX=3656 GN=LOC103490467 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.8e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MATLAAAAVRQARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60
          MATLAAAAVRQARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE
Sbjct: 1  MATLAAAAVRQARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60

Query: 61 HFVLVSLSGWGVLIFGGYKFFTRGKGNKDEKIVEASQ 98
          HFVLVSLSGWGVLIFGGYKFFTRGKGNKDEKIVEASQ
Sbjct: 61 HFVLVSLSGWGVLIFGGYKFFTRGKGNKDEKIVEASQ 97

[Close]

BLAST of MELO3C013527.2.1 vs. TrEMBL
Match: tr|A0A0A0KAD9|A0A0A0KAD9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124050 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-42
Identity = 90/97 (92.78%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 1  MATLAAAAVRQARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60
          MATLAAAAVR ARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE
Sbjct: 1  MATLAAAAVRHARALARVSSPQSTANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKWKEE 60

Query: 61 HFVLVSLSGWGVLIFGGYKFFTRGKGNKDEKIVEASQ 98
          HFVLVSLSGW +LI GGYKFFTRGKG KDEK+ EASQ
Sbjct: 61 HFVLVSLSGWALLISGGYKFFTRGKG-KDEKLAEASQ 96

[Close]

BLAST of MELO3C013527.2.1 vs. TrEMBL
Match: tr|A9P8A4|A9P8A4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G109100v3 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.8e-36
Identity = 77/99 (77.78%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 1  MATLAAAAVRQARALARVSSPQSTAN---LIHKRGLAGAADHHGPPKVNCWQDPMSPSKW 60
          MATLAAAA RQA  L+RVSSP++ A    LIH+RGLAGAADHHGPP++NCWQDPMSPSKW
Sbjct: 1  MATLAAAAARQAVTLSRVSSPKTPAQAAALIHRRGLAGAADHHGPPRINCWQDPMSPSKW 60

Query: 61 KEEHFVLVSLSGWGVLIFGGYKFFTRGKGNKDEKIVEAS 97
          KEEHFV+VSLSGWGVLI+GGYKFFT GK NK+EK +EA+
Sbjct: 61 KEEHFVIVSLSGWGVLIYGGYKFFTGGKSNKEEKPLEAA 99

[Close]

BLAST of MELO3C013527.2.1 vs. TrEMBL
Match: tr|A9P9R5|A9P9R5_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G104900v3 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.3e-36
Identity = 76/99 (76.77%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 1  MATLAAAAVRQARALARVSSPQSTAN---LIHKRGLAGAADHHGPPKVNCWQDPMSPSKW 60
          MATLAAAA RQA  L+R+SSP++ A    LIH+RGLAGAADHHGPP++NCWQDPMSPSKW
Sbjct: 1  MATLAAAAARQAVTLSRISSPKTPAQAAALIHRRGLAGAADHHGPPRINCWQDPMSPSKW 60

Query: 61 KEEHFVLVSLSGWGVLIFGGYKFFTRGKGNKDEKIVEAS 97
          KEEHFV+VSLSGWGVLI+GGYKFFT GK NK+EK +EA+
Sbjct: 61 KEEHFVIVSLSGWGVLIYGGYKFFTGGKSNKEEKPLEAA 99

[Close]

BLAST of MELO3C013527.2.1 vs. TrEMBL
Match: tr|A0A2C9US30|A0A2C9US30_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G151100 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 3.0e-36
Identity = 74/99 (74.75%), Postives = 89/99 (89.90%), Query Frame = 0


Query: 1  MATLAAAAVRQARALARVSSPQST---ANLIHKRGLAGAADHHGPPKVNCWQDPMSPSKW 60
          MATLAAA  RQA  L+R+SSP+++   A+LIH+RGLAGAADHHGPPKVNCWQDPM+P+KW
Sbjct: 1  MATLAAAVARQAATLSRLSSPKTSAQAASLIHRRGLAGAADHHGPPKVNCWQDPMNPAKW 60

Query: 61 KEEHFVLVSLSGWGVLIFGGYKFFTRGKGNKDEKIVEAS 97
          KEEHFV+VSLSGWG+L FGGYKFFT+GKG K+E ++EAS
Sbjct: 61 KEEHFVIVSLSGWGLLFFGGYKFFTKGKGKKEETLLEAS 99

The following BLAST results are available for this feature:

BLAST of MELO3C013527.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448206.1	8.8e-48	100.00	PREDICTED: uncharacterized protein LOC103490467 [Cucumis melo]	[more]
XP_022140380.1	2.2e-43	89.69	uncharacterized protein LOC111011068 [Momordica charantia]	[more]
KGN46690.1	1.9e-42	92.78	hypothetical protein Csa_6G124050 [Cucumis sativus]	[more]
XP_022944460.1	6.1e-41	86.60	uncharacterized protein LOC111448907 [Cucurbita moschata]	[more]
XP_023532872.1	6.8e-40	86.46	uncharacterized protein LOC111794912 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C013527.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20820.2	1.3e-08	44.26	unknown protein	[more]

BLAST of MELO3C013527.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C013527.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BJS2\|A0A1S3BJS2_CUCME	5.8e-48	100.00	uncharacterized protein LOC103490467 OS=Cucumis melo OX=3656 GN=LOC103490467 PE=...	[more]
tr\|A0A0A0KAD9\|A0A0A0KAD9_CUCSA	1.3e-42	92.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124050 PE=4 SV=1	[more]
tr\|A9P8A4\|A9P8A4_POPTR	1.8e-36	77.78	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G109100v3 PE=...	[more]
tr\|A9P9R5\|A9P9R5_POPTR	2.3e-36	76.77	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G104900v3 PE=...	[more]
tr\|A0A2C9US30\|A0A2C9US30_MANES	3.0e-36	74.75	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G151100 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0016874	ligase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C013527.2	MELO3C013527.2	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C013527.2.1	MELO3C013527.2.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C013527.2.1.five_prime_UTR.1	MELO3C013527.2.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C013527.2.1.exon.4	MELO3C013527.2.1.exon.4	exon
MELO3C013527.2.1.exon.3	MELO3C013527.2.1.exon.3	exon
MELO3C013527.2.1.exon.2	MELO3C013527.2.1.exon.2	exon
MELO3C013527.2.1.exon.1	MELO3C013527.2.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C013527.2.1.CDS.4	MELO3C013527.2.1.CDS.4	CDS
MELO3C013527.2.1.CDS.3	MELO3C013527.2.1.CDS.3	CDS
MELO3C013527.2.1.CDS.2	MELO3C013527.2.1.CDS.2	CDS
MELO3C013527.2.1.CDS.1	MELO3C013527.2.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C013527.2.1.three_prime_UTR.1	MELO3C013527.2.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35292	FAMILY NOT NAMED	coord: 1..96