MELO3C033014.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAAGATCAAAGACTTGGAAGATCGACTTTCCTTCAATTCTAGAAGATTGAAGCTCGAATTGACTTGTAATTACAACTTCTTGAAGATCGAAGACCACGAAGTTCTAAATTTTATTTTTTGTATTCGAGAGAAAGAACCAAAGGAGTAAATATTAGAGATTGTATCCACAATACATAAATCAATACAAAGTTCGATTCTACGAATTAAATCTTTACTGAAATCTCGTGTGAACAATTTGGCACGCCCAGTGGGACCATCTCTACCTTTCATCTCTTTCTCTTTTTTAAGAACATCCAAATAAAATCATGACATCTCAAGGCAACACTTCCAAAGCTCTCAGCGACATTGGCAAGCGACCAAACACTCATAGCCGCTCAAGGGAGATTCAATCATTTGAAGATACGCCACCTTTTGAAGTTGCAAAGAATATTTGGGAGCAAATCTCCAAGCCACCAAAAGGTGGAATTGTAATCAAAGAAAATCCTGTGATTGATGAACACTACTCGTTCTCTAAACCCTTAAGTGAAGAAATGTGTCACCCAAATATAATGTCAATTATGGTAACTGACGTGGATACAAGTGAAAATAGAATGGCGGAGCTTGAAAAGAAGGTGAACATGCTCATGAAGGTGGTTGAAGAAAGGGATTATGAGATTGCATTTCTAAAGAATCACAATGAAAGTCGTGATGCTGCTGGATCAAGTCATAAACATACTATCAACAATACTGACAAAGGGAAGGCAGTTATGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAATTACAGGAGATGATTGCAAACTCCATCAAAACTCAATATGGTGGACCTGCTCAAAATTTCTCTTTGTACTCCAAACCATATACGAAGAGGATCGACAATCTCAGAATGCTGAATGGATACCAACCTCCCAAGTTCCAACAGTTTGATGGAAAAGGCAACCCAAAACAACATGTTGGTCACTTCATCGAAACATGTGAAACTGCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTACATCGATCTGGAGCCTGAATCCATTGATAATTGGGAGCAACTTGAGAGGGACTTTCTCAACTGTTTCTACAGCACCCGACGTATCATCAGCATGATGGAGTTGATAAACACAAGACAACAAAAGGGAGAGCTAGTCATCGACTACATCAACCGATGGAGAGCTCTGAGTCTTGAATGTAAGGATCGACTCACCGAACTGTCTACAATGGAGATGTGCACCTAA GAAAGATCAAAGACTTGGAAGATCGACTTTCCTTCAATTCTAGAAGATTGAAGCTCGAATTGACTTGTAATTACAACTTCTTGAAGATCGAAGACCACGAAGTTCTAAATTTTATTTTTTGTATTCGAGAGAAAGAACCAAAGGAGTAAATATTAGAGATTGTATCCACAATACATAAATCAATACAAAGTTCGATTCTACGAATTAAATCTTTACTGAAATCTCGTGTGAACAATTTGGCACGCCCAGTGGGACCATCTCTACCTTTCATCTCTTTCTCTTTTTTAAGAACATCCAAATAAAATCATGACATCTCAAGGCAACACTTCCAAAGCTCTCAGCGACATTGGCAAGCGACCAAACACTCATAGCCGCTCAAGGGAGATTCAATCATTTGAAGATACGCCACCTTTTGAAGTTGCAAAGAATATTTGGGAGCAAATCTCCAAGCCACCAAAAGGTGGAATTGTAATCAAAGAAAATCCTGTGATTGATGAACACTACTCGTTCTCTAAACCCTTAAGTGAAGAAATGTGTCACCCAAATATAATGTCAATTATGGTAACTGACGTGGATACAAGTGAAAATAGAATGGCGGAGCTTGAAAAGAAGGTGAACATGCTCATGAAGGTGGTTGAAGAAAGGGATTATGAGATTGCATTTCTAAAGAATCACAATGAAAGTCGTGATGCTGCTGGATCAAGTCATAAACATACTATCAACAATACTGACAAAGGGAAGGCAGTTATGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAATTACAGGAGATGATTGCAAACTCCATCAAAACTCAATATGGTGGACCTGCTCAAAATTTCTCTTTGTACTCCAAACCATATACGAAGAGGATCGACAATCTCAGAATGCTGAATGGATACCAACCTCCCAAGTTCCAACAGTTTGATGGAAAAGGCAACCCAAAACAACATGTTGGTCACTTCATCGAAACATGTGAAACTGCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTACATCGATCTGGAGCCTGAATCCATTGATAATTGGGAGCAACTTGAGAGGGACTTTCTCAACTGTTTCTACAGCACCCGACGTATCATCAGCATGATGGAGTTGATAAACACAAGACAACAAAAGGGAGAGCTAGTCATCGACTACATCAACCGATGGAGAGCTCTGAGTCTTGAATGTAAGGATCGACTCACCGAACTGTCTACAATGGAGATGTGCACCTAA ATGACATCTCAAGGCAACACTTCCAAAGCTCTCAGCGACATTGGCAAGCGACCAAACACTCATAGCCGCTCAAGGGAGATTCAATCATTTGAAGATACGCCACCTTTTGAAGTTGCAAAGAATATTTGGGAGCAAATCTCCAAGCCACCAAAAGGTGGAATTGTAATCAAAGAAAATCCTGTGATTGATGAACACTACTCGTTCTCTAAACCCTTAAGTGAAGAAATGTGTCACCCAAATATAATGTCAATTATGGTAACTGACGTGGATACAAGTGAAAATAGAATGGCGGAGCTTGAAAAGAAGGTGAACATGCTCATGAAGGTGGTTGAAGAAAGGGATTATGAGATTGCATTTCTAAAGAATCACAATGAAAGTCGTGATGCTGCTGGATCAAGTCATAAACATACTATCAACAATACTGACAAAGGGAAGGCAGTTATGCAAGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAATTACAGGAGATGATTGCAAACTCCATCAAAACTCAATATGGTGGACCTGCTCAAAATTTCTCTTTGTACTCCAAACCATATACGAAGAGGATCGACAATCTCAGAATGCTGAATGGATACCAACCTCCCAAGTTCCAACAGTTTGATGGAAAAGGCAACCCAAAACAACATGTTGGTCACTTCATCGAAACATGTGAAACTGCTGGTACGCGAGGAGATTTATTGGTCAAACAGTTCGTTCGAACTCTCAAAGGAAATGCCTTCGACTGGTACATCGATCTGGAGCCTGAATCCATTGATAATTGGGAGCAACTTGAGAGGGACTTTCTCAACTGTTTCTACAGCACCCGACGTATCATCAGCATGATGGAGTTGATAAACACAAGACAACAAAAGGGAGAGCTAGTCATCGACTACATCAACCGATGGAGAGCTCTGAGTCTTGAATGTAAGGATCGACTCACCGAACTGTCTACAATGGAGATGTGCACCTAA MTSQGNTSKALSDIGKRPNTHSRSREIQSFEDTPPFEVAKNIWEQISKPPKGGIVIKENPVIDEHYSFSKPLSEEMCHPNIMSIMVTDVDTSENRMAELEKKVNMLMKVVEERDYEIAFLKNHNESRDAAGSSHKHTINNTDKGKAVMQESQPQNSTSIASLSVQQLQEMIANSIKTQYGGPAQNFSLYSKPYTKRIDNLRMLNGYQPPKFQQFDGKGNPKQHVGHFIETCETAGTRGDLLVKQFVRTLKGNAFDWYIDLEPESIDNWEQLERDFLNCFYSTRRIISMMELINTRQQKGELVIDYINRWRALSLECKDRLTELSTMEMCT
BLAST of MELO3C033014.2 vs. NCBI nr
Match: ADN34247.1 (ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 382.1 bits (980), Expect = 1.9e-102 Identity = 197/320 (61.56%), Postives = 246/320 (76.88%), Query Frame = 0
BLAST of MELO3C033014.2 vs. NCBI nr
Match: ADN33709.1 (retrotransposon gag protein [Cucumis melo subsp. melo]) HSP 1 Score: 321.6 bits (823), Expect = 3.1e-84 Identity = 166/300 (55.33%), Postives = 209/300 (69.67%), Query Frame = 0
BLAST of MELO3C033014.2 vs. NCBI nr
Match: XP_012847343.1 (PREDICTED: uncharacterized protein LOC105967287 [Erythranthe guttata]) HSP 1 Score: 300.1 bits (767), Expect = 9.5e-78 Identity = 152/258 (58.91%), Postives = 193/258 (74.81%), Query Frame = 0
BLAST of MELO3C033014.2 vs. NCBI nr
Match: XP_012838511.1 (PREDICTED: uncharacterized protein LOC105959033 [Erythranthe guttata]) HSP 1 Score: 296.6 bits (758), Expect = 1.1e-76 Identity = 150/258 (58.14%), Postives = 192/258 (74.42%), Query Frame = 0
BLAST of MELO3C033014.2 vs. NCBI nr
Match: XP_012830541.1 (PREDICTED: uncharacterized protein LOC105951637 [Erythranthe guttata]) HSP 1 Score: 296.6 bits (758), Expect = 1.1e-76 Identity = 151/258 (58.53%), Postives = 192/258 (74.42%), Query Frame = 0
BLAST of MELO3C033014.2 vs. TrEMBL
Match: tr|E5GCP6|E5GCP6_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 382.1 bits (980), Expect = 1.3e-102 Identity = 197/320 (61.56%), Postives = 246/320 (76.88%), Query Frame = 0
BLAST of MELO3C033014.2 vs. TrEMBL
Match: tr|E5GB67|E5GB67_CUCME (Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 2.0e-84 Identity = 166/300 (55.33%), Postives = 209/300 (69.67%), Query Frame = 0
BLAST of MELO3C033014.2 vs. TrEMBL
Match: tr|A0A2N9HUN4|A0A2N9HUN4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43296 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 6.1e-81 Identity = 158/261 (60.54%), Postives = 190/261 (72.80%), Query Frame = 0
BLAST of MELO3C033014.2 vs. TrEMBL
Match: tr|A0A2N9ITV2|A0A2N9ITV2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55697 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 6.1e-81 Identity = 158/261 (60.54%), Postives = 190/261 (72.80%), Query Frame = 0
BLAST of MELO3C033014.2 vs. TrEMBL
Match: tr|A0A2N9ILM6|A0A2N9ILM6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53107 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 6.1e-81 Identity = 158/261 (60.54%), Postives = 190/261 (72.80%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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