MELO3C033012.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TACTAGTTATGATAATGTTTGTTGCTCTGCTAATGTTAAGATAATGTTTTCAGAGGGAAGCTGAAATGCAAGGAATGTATGCAAGGCAGTCGCGGACAAGGGAAGAGGTAGAGACATTGTATGAAAAAGATGAAGACGAGCATGGTGACACCTTACGTGGGGCATGCGGTGAACTATACTTCAGATGAATTTTGGATTTGCTGTGATATCTGTGAGAAATGGTTCCATGAGAAATTTGTTGTATGA TACTAGTTATGATAATGTTTGTTGCTCTGCTAATGTTAAGATAATGTTTTCAGAGGGAAGCTGAAATGCAAGGAATGTATGCAAGGCAGTCGCGGACAAGGGAAGAGGTAGAGACATTGTATGAAAAAGATGAAGACGAGCATGGTGACACCTTACGTGGGGCATGCGGTGAACTATACTTCAGATGAATTTTGGATTTGCTGTGATATCTGTGAGAAATGGTTCCATGAGAAATTTGTTGTATGA ATGAAAAAGATGAAGACGAGCATGGTGACACCTTACGTGGGGCATGCGGTGAACTATACTTCAGATGAATTTTGGATTTGCTGTGATATCTGTGAGAAATGGTTCCATGAGAAATTTGTTGTATGA MKKMKTSMVTPYVGHAVNYTSDEFWICCDICEKWFHEKFVV
BLAST of MELO3C033012.2 vs. NCBI nr
Match: XP_016903323.1 (PREDICTED: PHD finger protein ALFIN-LIKE 3-like [Cucumis melo]) HSP 1 Score: 53.5 bits (127), Expect = 1.9e-04 Identity = 21/24 (87.50%), Postives = 21/24 (87.50%), Query Frame = 0
BLAST of MELO3C033012.2 vs. NCBI nr
Match: XP_003633111.1 (PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Vitis vinifera] >CBI27844.3 unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 53.1 bits (126), Expect = 2.5e-04 Identity = 20/23 (86.96%), Postives = 20/23 (86.96%), Query Frame = 0
BLAST of MELO3C033012.2 vs. NCBI nr
Match: ABO82473.1 (unknown, partial [Helianthus annuus] >ABO82474.1 unknown, partial [Helianthus annuus] >ABO82475.1 unknown, partial [Helianthus annuus] >ABO82476.1 unknown, partial [Helianthus annuus] >ABO82477.1 unknown, partial [Helianthus annuus] >ABO82478.1 unknown, partial [Helianthus annuus] >ABO82479.1 unknown, partial [Helianthus annuus] >ABO82480.1 unknown, partial [Helianthus annuus] >ABO82481.1 unknown, partial [Helianthus annuus] >ABO82482.1 unknown, partial [Helianthus annuus] >ABO82483.1 unknown, partial [Helianthus annuus] >ABO82484.1 unknown, partial [Helianthus annuus] >ABO82485.1 unknown, partial [Helianthus annuus] >ABO82486.1 unknown, partial [Helianthus annuus] >ABO82487.1 unknown, partial [Helianthus annuus] >ABO82488.1 unknown, partial [Helianthus annuus] >ABO82489.1 unknown, partial [Helianthus annuus] >ABO82490.1 unknown, partial [Helianthus petiolaris] >ABO82491.1 unknown, partial [Helianthus petiolaris] >ABO82492.1 unknown, partial [Helianthus petiolaris] >ABO82493.1 unknown, partial [Helianthus petiolaris] >ABO82494.1 unknown, partial [Helianthus petiolaris] >ABO82495.1 unknown, partial [Helianthus petiolaris] >ABO82496.1 unknown, partial [Helianthus petiolaris] >ABO82497.1 unknown, partial [Helianthus petiolaris] >ABO82498.1 unknown, partial [Helianthus petiolaris] >ABO82499.1 unknown, partial [Helianthus petiolaris] >ABO82500.1 unknown, partial [Helianthus petiolaris] >ABO82501.1 unknown, partial [Helianthus petiolaris] >ABO82502.1 unknown, partial [Helianthus petiolaris] >ABO82503.1 unknown, partial [Helianthus anomalus] >ABO82504.1 unknown, partial [Helianthus anomalus] >ABO82505.1 unknown, partial [Helianthus anomalus] >ABO82506.1 unknown, partial [Helianthus anomalus] >ABO82507.1 unknown, partial [Helianthus anomalus] >ABO82508.1 unknown, partial [Helianthus anomalus] >ABO82509.1 unknown, partial [Helianthus anomalus] >ABO82510.1 unknown, partial [Helianthus anomalus] >ABO82511.1 unknown, partial [Helianthus anomalus] >ABO82512.1 unknown, partial [Helianthus anomalus] >ABO82513.1 unknown, partial [Helianthus anomalus] >ABO82514.1 unknown, partial [Helianthus anomalus] >ABO82515.1 unknown, partial [Helianthus anomalus] >ABO82516.1 unknown, partial [Helianthus anomalus] >ABO82517.1 unknown, partial [Helianthus anomalus] >ABO82518.1 unknown, partial [Helianthus anomalus]) HSP 1 Score: 53.1 bits (126), Expect = 2.5e-04 Identity = 20/23 (86.96%), Postives = 20/23 (86.96%), Query Frame = 0
BLAST of MELO3C033012.2 vs. NCBI nr
Match: ACU14823.1 (unknown [Glycine max]) HSP 1 Score: 53.1 bits (126), Expect = 2.5e-04 Identity = 20/23 (86.96%), Postives = 20/23 (86.96%), Query Frame = 0
BLAST of MELO3C033012.2 vs. NCBI nr
Match: XP_004141692.1 (PREDICTED: PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis sativus] >KGN45504.1 hypothetical protein Csa_7G450620 [Cucumis sativus]) HSP 1 Score: 53.1 bits (126), Expect = 2.5e-04 Identity = 20/23 (86.96%), Postives = 20/23 (86.96%), Query Frame = 0
BLAST of MELO3C033012.2 vs. TAIR10
Match: AT5G05610.1 (alfin-like 1) HSP 1 Score: 51.2 bits (121), Expect = 1.7e-07 Identity = 17/23 (73.91%), Postives = 21/23 (91.30%), Query Frame = 0
BLAST of MELO3C033012.2 vs. TAIR10
Match: AT5G20510.1 (alfin-like 5) HSP 1 Score: 50.4 bits (119), Expect = 3.0e-07 Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 0
BLAST of MELO3C033012.2 vs. TAIR10
Match: AT2G02470.1 (alfin-like 6) HSP 1 Score: 49.3 bits (116), Expect = 6.6e-07 Identity = 18/23 (78.26%), Postives = 19/23 (82.61%), Query Frame = 0
BLAST of MELO3C033012.2 vs. TAIR10
Match: AT1G14510.1 (alfin-like 7) HSP 1 Score: 48.9 bits (115), Expect = 8.6e-07 Identity = 18/23 (78.26%), Postives = 18/23 (78.26%), Query Frame = 0
BLAST of MELO3C033012.2 vs. TAIR10
Match: AT3G11200.1 (alfin-like 2) HSP 1 Score: 47.8 bits (112), Expect = 1.9e-06 Identity = 15/23 (65.22%), Postives = 21/23 (91.30%), Query Frame = 0
BLAST of MELO3C033012.2 vs. Swiss-Prot
Match: sp|Q9FFF5|ALFL1_ARATH (PHD finger protein ALFIN-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=AL1 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 3.1e-06 Identity = 17/23 (73.91%), Postives = 21/23 (91.30%), Query Frame = 0
BLAST of MELO3C033012.2 vs. Swiss-Prot
Match: sp|Q5XEM9|ALFL5_ARATH (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=AL5 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 5.3e-06 Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 0
BLAST of MELO3C033012.2 vs. Swiss-Prot
Match: sp|Q40359|ALFIN_MEDSA (PHD finger protein Alfin1 OS=Medicago sativa OX=3879 GN=ALFIN-1 PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 7.0e-06 Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 0
BLAST of MELO3C033012.2 vs. Swiss-Prot
Match: sp|Q8S8M9|ALFL6_ARATH (PHD finger protein ALFIN-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=AL6 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 1.2e-05 Identity = 18/23 (78.26%), Postives = 19/23 (82.61%), Query Frame = 0
BLAST of MELO3C033012.2 vs. Swiss-Prot
Match: sp|B8B8C5|ALFL9_ORYSI (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26819 PE=3 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 1.2e-05 Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 0
BLAST of MELO3C033012.2 vs. TrEMBL
Match: tr|A0A2N9GLH5|A0A2N9GLH5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28161 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 7.5e-05 Identity = 25/40 (62.50%), Postives = 27/40 (67.50%), Query Frame = 0
BLAST of MELO3C033012.2 vs. TrEMBL
Match: tr|A0A1S4E514|A0A1S4E514_CUCME (PHD finger protein ALFIN-LIKE 3-like OS=Cucumis melo OX=3656 GN=LOC107992128 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.3e-04 Identity = 21/24 (87.50%), Postives = 21/24 (87.50%), Query Frame = 0
BLAST of MELO3C033012.2 vs. TrEMBL
Match: tr|A0A1U8A4B7|A0A1U8A4B7_NELNU (PHD finger protein ALFIN-LIKE 4 OS=Nelumbo nucifera OX=4432 GN=LOC104600621 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 1.7e-04 Identity = 20/23 (86.96%), Postives = 20/23 (86.96%), Query Frame = 0
BLAST of MELO3C033012.2 vs. TrEMBL
Match: tr|B9HD31|B9HD31_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G223500v3 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 1.7e-04 Identity = 20/23 (86.96%), Postives = 20/23 (86.96%), Query Frame = 0
BLAST of MELO3C033012.2 vs. TrEMBL
Match: tr|I1LY29|I1LY29_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100500110 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 1.7e-04 Identity = 20/23 (86.96%), Postives = 20/23 (86.96%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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