MELO3C033254.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAGAGATATTTTGGTTATTCCAGTTTCTACTGTAGCATCAGAGTCGGCTTTTAGTACTGGAGGACGTGTTGTTGACTCATCACGCTGCTCATTGGCTCCTAAAACAGTGGAGGCTCTCATATGTACTCAAAATTGGCTAAATTCTGATCCAATACATCTTCAATTTCAACATGAATTGGAAGAGGCTTCAAAATTTGAAGAAGGTATTTTCAAATCTTTACATGATATCTTTTGTAGTCGTAATGTGTAACTTTAGTGAAATCTTAAATTATTTAGTAAATTCTTCATATTGATTATATAGGATTCCGGGTGGTTATGGAGAATGAAAAGGAGCTTCAAGACCTTCTAGATTTTGATAAGTTGTCAATTACCGATTAAGCGATTATTAACTAATTCTGATCCAAGACTTGTAATATTTCTATTGACTAGATTATCATAGTGTTTTTGTTTTATACTTTGGTTGTATTTGTGACTCTTAATAGTAATGTGGTGAAGTGAATTGAACTTGGATGTTTCTAACCCTATAATATTTGATATATATTTCATTTTGGTAGTATGTTTAGATTCTTATTTTTATTTTGTTTATTTTATTAATTTGTGTAATACCTATGAACTAAGCATTGAAATTAATAGAACTTGATTTTATTTTTTAATCACAATTATATGATTTTAAGACAATATAGAATATATATCGTAGACTTTTCTATTGAAATTAAAAAGTGAAATAAAACATAATAACGTCATTCTTAGTTTTTAAAATCGTTTGTTTATCAAAAAGAAAGCAAGAAACATAGAAAAGGAAGGAGGAGGAGGAGAAGAAACAGGAAAGAAAGAAAGAAGGAGAGGAAAAAAAAGTAAGAAAACTGATCGACCCGACCCGACCCGACCCGGCTGCCGGTTGGACCGGCTGATTTTGTTAGAACCGGCGGACGAGGCCGGTTTTCCAACTTCCATGCCGACTTGCAGTCGGTTCGGGGCATTTTGGTCGGAAAACCAACCCCGACCACCCAATGCTCACCCCTAA ATGGCTAGAGATATTTTGGTTATTCCAGTTTCTACTGTAGCATCAGAGTCGGCTTTTAGTACTGGAGGACGTGTTGTTGACTCATCACGCTGCTCATTGGCTCCTAAAACAGTGGAGGCTCTCATATGTACTCAAAATTGGCTAAATTCTGATCCAATACATCTTCAATTTCAACATGAATTGGAAGAGGCTTCAAAATTTGAAGAAGGATTCCGGGTGAAAGCAAGAAACATAGAAAAGGAAGGAGGAGGAGGAGAAGAAACAGGAAAGAAAGAAAGAAGGAGAGGAAAAAAAAGTAAGAAAACTGATCGACCCGACCCGACCCGACCCGGCTGCCGGTTGGACCGGCTGATTTTGTTAGAACCGGCGGACGAGGCCGGTTTTCCAACTTCCATGCCGACTTGCAGTCGGTTCGGGGCATTTTGGTCGGAAAACCAACCCCGACCACCCAATGCTCACCCCTAA ATGGCTAGAGATATTTTGGTTATTCCAGTTTCTACTGTAGCATCAGAGTCGGCTTTTAGTACTGGAGGACGTGTTGTTGACTCATCACGCTGCTCATTGGCTCCTAAAACAGTGGAGGCTCTCATATGTACTCAAAATTGGCTAAATTCTGATCCAATACATCTTCAATTTCAACATGAATTGGAAGAGGCTTCAAAATTTGAAGAAGGATTCCGGGTGAAAGCAAGAAACATAGAAAAGGAAGGAGGAGGAGGAGAAGAAACAGGAAAGAAAGAAAGAAGGAGAGGAAAAAAAAGTAAGAAAACTGATCGACCCGACCCGACCCGACCCGGCTGCCGGTTGGACCGGCTGATTTTGTTAGAACCGGCGGACGAGGCCGGTTTTCCAACTTCCATGCCGACTTGCAGTCGGTTCGGGGCATTTTGGTCGGAAAACCAACCCCGACCACCCAATGCTCACCCCTAA MARDILVIPVSTVASESAFSTGGRVVDSSRCSLAPKTVEALICTQNWLNSDPIHLQFQHELEEASKFEEGFRVKARNIEKEGGGGEETGKKERRRGKKSKKTDRPDPTRPGCRLDRLILLEPADEAGFPTSMPTCSRFGAFWSENQPRPPNAHP
BLAST of MELO3C033254.2 vs. NCBI nr
Match: ADN33918.1 (transposase [Cucumis melo subsp. melo]) HSP 1 Score: 131.7 bits (330), Expect = 2.1e-27 Identity = 69/81 (85.19%), Postives = 71/81 (87.65%), Query Frame = 0
BLAST of MELO3C033254.2 vs. NCBI nr
Match: XP_016901224.1 (PREDICTED: uncharacterized protein LOC107991203 [Cucumis melo]) HSP 1 Score: 131.7 bits (330), Expect = 2.1e-27 Identity = 69/81 (85.19%), Postives = 71/81 (87.65%), Query Frame = 0
BLAST of MELO3C033254.2 vs. NCBI nr
Match: XP_016901938.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo]) HSP 1 Score: 122.1 bits (305), Expect = 1.7e-24 Identity = 66/81 (81.48%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of MELO3C033254.2 vs. NCBI nr
Match: XP_016903504.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo]) HSP 1 Score: 96.3 bits (238), Expect = 9.8e-17 Identity = 47/73 (64.38%), Postives = 62/73 (84.93%), Query Frame = 0
BLAST of MELO3C033254.2 vs. NCBI nr
Match: XP_011652627.1 (PREDICTED: uncharacterized protein LOC105435038 [Cucumis sativus]) HSP 1 Score: 95.5 bits (236), Expect = 1.7e-16 Identity = 47/73 (64.38%), Postives = 62/73 (84.93%), Query Frame = 0
BLAST of MELO3C033254.2 vs. TAIR10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain) HSP 1 Score: 50.8 bits (120), Expect = 8.5e-07 Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 0
BLAST of MELO3C033254.2 vs. Swiss-Prot
Match: sp|P08770|TRA1_MAIZE (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 3.0e-09 Identity = 32/48 (66.67%), Postives = 38/48 (79.17%), Query Frame = 0
BLAST of MELO3C033254.2 vs. Swiss-Prot
Match: sp|P03010|TRAC9_MAIZE (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.0e-09 Identity = 32/48 (66.67%), Postives = 38/48 (79.17%), Query Frame = 0
BLAST of MELO3C033254.2 vs. Swiss-Prot
Match: sp|Q75HY5|RSLE3_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06 Identity = 28/56 (50.00%), Postives = 38/56 (67.86%), Query Frame = 0
BLAST of MELO3C033254.2 vs. Swiss-Prot
Match: sp|Q6AVI0|RSLE2_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 6.9e-06 Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of MELO3C033254.2 vs. Swiss-Prot
Match: sp|Q9M2N5|DSLE_ARATH (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.5e-05 Identity = 26/48 (54.17%), Postives = 31/48 (64.58%), Query Frame = 0
BLAST of MELO3C033254.2 vs. TrEMBL
Match: tr|A0A1S4DZ17|A0A1S4DZ17_CUCME (uncharacterized protein LOC107991203 OS=Cucumis melo OX=3656 GN=LOC107991203 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.4e-27 Identity = 69/81 (85.19%), Postives = 71/81 (87.65%), Query Frame = 0
BLAST of MELO3C033254.2 vs. TrEMBL
Match: tr|E5GBS6|E5GBS6_CUCME (Transposase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.4e-27 Identity = 69/81 (85.19%), Postives = 71/81 (87.65%), Query Frame = 0
BLAST of MELO3C033254.2 vs. TrEMBL
Match: tr|A0A1S4E139|A0A1S4E139_CUCME (zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo OX=3656 GN=LOC107991479 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24 Identity = 66/81 (81.48%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of MELO3C033254.2 vs. TrEMBL
Match: tr|A0A1S4E5K1|A0A1S4E5K1_CUCME (zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo OX=3656 GN=LOC107992219 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 6.5e-17 Identity = 47/73 (64.38%), Postives = 62/73 (84.93%), Query Frame = 0
BLAST of MELO3C033254.2 vs. TrEMBL
Match: tr|A0A2K3L630|A0A2K3L630_TRIPR (HAT family dimerization domain-containing protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g029906 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.8e-14 Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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