MELO3C019149.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019149.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	E3 ubiquitin-protein ligase At1g63170-like
Location	chr08 : 14552480 .. 14553039 (+)
Sequence length	560

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCCACTTTCACTACAACTCCTCGCTTTCTTCACCGGCGCCTTTTCCCCCCGCCCCTCCCGTCACTCTTCCCCCAACTTCTCTTTTCATGGACGACGTTCGACCATCCAACTCCGCTTTCTTGTCCTGGCAGCGAACCATGAGCTCCAGATTCGCGCTTCCCTTGATTCAAGACGCTGCTAATTTGATCATGGAACACCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGAGGAAGATGATAATGAATACGACCGTCGTGTTCTATTCCGGAATGGGTCTTCCTTTATCAAGCCTATTCTGGTACTCGACTTGTTCTGGAATTTGTTCTTCGTCTTTTTATCTGTCACAGTGCTGGTATTGTCTGCAGAAGAGAAACCTACTGCTCCTCTCAGATTCTGGCTTTCGGGTTATGCTGTTCAGTGCCTTTTCCATGTCTTTTTTGTGTTCGTTGCTTACTTGAGAAGGAGTAGTCGCTATCGACTTGGTTTTGAGAATCGTGGGGCTCAGGATGAACTTCGCCTTTCTCATAATCGTATAAGGTAA

mRNA sequence

ATTCCCACTTTCACTACAACTCCTCGCTTTCTTCACCGGCGCCTTTTCCCCCCGCCCCTCCCGTCACTCTTCCCCCAACTTCTCTTTTCATGGACGACGTTCGACCATCCAACTCCGCTTTCTTGTCCTGGCAGCGAACCATGAGCTCCAGATTCGCGCTTCCCTTGATTCAAGACGCTGCTAATTTGATCATGGAACACCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGAGGAAGATGATAATGAATACGACCGTCGTGTTCTATTCCGGAATGGGTCTTCCTTTATCAAGCCTATTCTGGTACTCGACTTGTTCTGGAATTTGTTCTTCGTCTTTTTATCTGTCACAGTGCTGGTATTGTCTGCAGAAGAGAAACCTACTGCTCCTCTCAGATTCTGGCTTTCGGGTTATGCTGTTCAGTGCCTTTTCCATGTCTTTTTTGTGTTCGTTGCTTACTTGAGAAGGAGTAGTCGCTATCGACTTGGTTTTGAGAATCGTGGGGCTCAGGATGAACTTCGCCTTTCTCATAATCGTATAAGGTAA

Coding sequence (CDS)

ATGGACGACGTTCGACCATCCAACTCCGCTTTCTTGTCCTGGCAGCGAACCATGAGCTCCAGATTCGCGCTTCCCTTGATTCAAGACGCTGCTAATTTGATCATGGAACACCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGAGGAAGATGATAATGAATACGACCGTCGTGTTCTATTCCGGAATGGGTCTTCCTTTATCAAGCCTATTCTGGTACTCGACTTGTTCTGGAATTTGTTCTTCGTCTTTTTATCTGTCACAGTGCTGGTATTGTCTGCAGAAGAGAAACCTACTGCTCCTCTCAGATTCTGGCTTTCGGGTTATGCTGTTCAGTGCCTTTTCCATGTCTTTTTTGTGTTCGTTGCTTACTTGAGAAGGAGTAGTCGCTATCGACTTGGTTTTGAGAATCGTGGGGCTCAGGATGAACTTCGCCTTTCTCATAATCGTATAAGGTAA

Protein sequence

MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYDRRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR

Homology

[Close]

BLAST of MELO3C019149.2.1 vs. NCBI nr
Match: XP_008455807.1 (PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Cucumis melo])

HSP 1 Score: 315.5 bits (807), Expect = 1.0e-82
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD
Sbjct: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 157
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156

[Close]

BLAST of MELO3C019149.2.1 vs. NCBI nr
Match: XP_004144310.1 (PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >KGN54665.1 hypothetical protein Csa_4G418580 [Cucumis sativus])

HSP 1 Score: 308.9 bits (790), Expect = 9.7e-81
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MDDVRPSNS FLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSV VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 157
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156

[Close]

BLAST of MELO3C019149.2.1 vs. NCBI nr
Match: XP_022154475.1 (E3 ubiquitin-protein ligase At4g11680-like [Momordica charantia])

HSP 1 Score: 285.0 bits (728), Expect = 1.5e-73
Identity = 137/156 (87.82%), Postives = 149/156 (95.51%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MD+ RPS++ F+SW+RTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDE+D+ EYD
Sbjct: 1   MDEGRPSSTGFMSWRRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEDDETEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV+FR+GSSFIKPILVLDLFWNLFFVF++V VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVIFRHGSSFIKPILVLDLFWNLFFVFVAVLVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 157
           VFFVF AYLRRSSRYR GFE+RGAQDELR SHNRIR
Sbjct: 121 VFFVFFAYLRRSSRYRFGFEHRGAQDELRFSHNRIR 156

[Close]

BLAST of MELO3C019149.2.1 vs. NCBI nr
Match: XP_022949865.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucurbita moschata])

HSP 1 Score: 271.6 bits (693), Expect = 1.7e-69
Identity = 134/156 (85.90%), Postives = 142/156 (91.03%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MD  RPS++ FLSW+RT+SSRFALPLIQDAANLIMEHRGVIFGDCA+PRVDDEED+N YD
Sbjct: 1   MDGGRPSSTGFLSWRRTLSSRFALPLIQDAANLIMEHRGVIFGDCAEPRVDDEEDENGYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV  RNGSSFIKPILVLDLFWNLFFVF+SV VLVLSAEEKP+APLR WLSGYAVQCL H
Sbjct: 61  RRVFLRNGSSFIKPILVLDLFWNLFFVFVSVIVLVLSAEEKPSAPLRLWLSGYAVQCLLH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 157
           VFFVF AY RRSSRYR  FENR AQDELRLSHNRIR
Sbjct: 121 VFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIR 156

[Close]

BLAST of MELO3C019149.2.1 vs. NCBI nr
Match: XP_023543467.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.6 bits (693), Expect = 1.7e-69
Identity = 134/156 (85.90%), Postives = 142/156 (91.03%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MD  RPS++ FLSW+RT+SSRFALPLIQDAANLIMEHRGVIFGDCA+PRVDDEED+N YD
Sbjct: 1   MDGGRPSSTGFLSWRRTLSSRFALPLIQDAANLIMEHRGVIFGDCAEPRVDDEEDENGYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV  RNGSSFIKPILVLDLFWNLFFVF+SV VLVLSAEEKP+APLR WLSGYAVQCL H
Sbjct: 61  RRVFLRNGSSFIKPILVLDLFWNLFFVFVSVIVLVLSAEEKPSAPLRLWLSGYAVQCLLH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 157
           VFFVF AY RRSSRYR  FENR AQDELRLSHNRIR
Sbjct: 121 VFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIR 156

[Close]

BLAST of MELO3C019149.2.1 vs. TAIR10
Match: AT1G68070.1 (Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 72.0 bits (175), Expect = 3.6e-13
Identity = 29/68 (42.65%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 71  FIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLR 130
           + KP++ LD+ WN  FV +++ +L++  EEKP  P+R W+ GYA+QCL HV  V++ + +
Sbjct: 64  YSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRK 123

Query: 131 RSSRYRLG 139
           R++R R G
Sbjct: 124 RNARSRPG 131

[Close]

BLAST of MELO3C019149.2.1 vs. TAIR10
Match: AT3G61180.1 (RING/U-box superfamily protein)

HSP 1 Score: 71.6 bits (174), Expect = 4.7e-13
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 70  SFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYL 129
           ++ KPI+VLD+ WN  FV +S+ +L  S++E P  PLR W+ GY VQCLFHV  V   Y 
Sbjct: 79  AYSKPIIVLDILWNFLFVIVSIAILGFSSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYK 138

Query: 130 RR 132
           RR
Sbjct: 139 RR 140

[Close]

BLAST of MELO3C019149.2.1 vs. TAIR10
Match: AT1G12760.1 (Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 65.9 bits (159), Expect = 2.6e-11
Identity = 34/103 (33.01%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 26  LIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYDRRVLFRNGSSFIKPILVLDLFWNLF 85
           L + ++  +M    ++  + A  ++++ + D  Y             KP++VLD+ WNL 
Sbjct: 63  LSRASSGRVMREPSMLVREAAAEQLEERQSDWAYS------------KPVVVLDIVWNLA 122

Query: 86  FVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAY 129
           FV ++  +LV+S +E P  PLR WL GYA+QC+ H+  V V Y
Sbjct: 123 FVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEY 153

[Close]

BLAST of MELO3C019149.2.1 vs. TAIR10
Match: AT4G11680.1 (Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 65.9 bits (159), Expect = 2.6e-11
Identity = 29/59 (49.15%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 70  SFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAY 129
           ++ KP++ LD+ WNL FV + V VL+LS +EKP  PLR W+ GY +QC  H+  V V Y
Sbjct: 104 AYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEY 162

[Close]

BLAST of MELO3C019149.2.1 vs. TAIR10
Match: AT2G01735.1 (RING-finger protein for embryogenesis)

HSP 1 Score: 61.6 bits (148), Expect = 4.9e-10
Identity = 28/66 (42.42%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 71  FIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLR 130
           + KP++  D+ WN   V  S  +LV + EE+P  P+R W+  Y +QCLFHV  V+  Y R
Sbjct: 73  YSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWR 132

Query: 131 RSSRYR 137
           R+S  R
Sbjct: 133 RNSTRR 138

[Close]

BLAST of MELO3C019149.2.1 vs. Swiss-Prot
Match: sp|Q9LN71|RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.7e-10
Identity = 34/103 (33.01%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 26  LIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYDRRVLFRNGSSFIKPILVLDLFWNLF 85
           L + ++  +M    ++  + A  ++++ + D  Y             KP++VLD+ WNL 
Sbjct: 63  LSRASSGRVMREPSMLVREAAAEQLEERQSDWAYS------------KPVVVLDIVWNLA 122

Query: 86  FVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAY 129
           FV ++  +LV+S +E P  PLR WL GYA+QC+ H+  V V Y
Sbjct: 123 FVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEY 153

[Close]

BLAST of MELO3C019149.2.1 vs. Swiss-Prot
Match: sp|Q93Z92|RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.7e-10
Identity = 29/59 (49.15%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 70  SFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAY 129
           ++ KP++ LD+ WNL FV + V VL+LS +EKP  PLR W+ GY +QC  H+  V V Y
Sbjct: 104 AYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEY 162

[Close]

BLAST of MELO3C019149.2.1 vs. Swiss-Prot
Match: sp|Q8GUU2|RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.8e-09
Identity = 28/66 (42.42%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 71  FIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLR 130
           + KP++  D+ WN   V  S  +LV + EE+P  P+R W+  Y +QCLFHV  V+  Y R
Sbjct: 73  YSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWR 132

Query: 131 RSSRYR 137
           R+S  R
Sbjct: 133 RNSTRR 138

[Close]

BLAST of MELO3C019149.2.1 vs. Swiss-Prot
Match: sp|Q8LDB8|RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 70  SFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCL 119
           ++ KP++VLD  WNL FV ++  VLVLS++E P  PLR W+ GY +QC+
Sbjct: 69  AYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCM 117

[Close]

BLAST of MELO3C019149.2.1 vs. TrEMBL
Match: tr|A0A1S3C1Q6|A0A1S3C1Q6_CUCME (E3 ubiquitin-protein ligase At1g63170-like OS=Cucumis melo OX=3656 GN=LOC103495904 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 6.9e-83
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD
Sbjct: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 157
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156

[Close]

BLAST of MELO3C019149.2.1 vs. TrEMBL
Match: tr|A0A0A0KYD1|A0A0A0KYD1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G418580 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 6.4e-81
Identity = 152/156 (97.44%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MDDVRPSNS FLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFFVFLSV VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 157
           VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIR 156

[Close]

BLAST of MELO3C019149.2.1 vs. TrEMBL
Match: tr|A0A1S3B880|A0A1S3B880_CUCME (E3 ubiquitin-protein ligase At4g11680-like OS=Cucumis melo OX=3656 GN=LOC103486858 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 59/142 (41.55%), Postives = 82/142 (57.75%), Query Frame = 0


Query: 4   VRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHR-GVIFGDCADPRVDDEEDDNEYDRR 63
           +RP+ +  L    T+S+ F +PL +    LI   R   +  DCA    +D  D +++ RR
Sbjct: 7   LRPTLNHSLLRYPTVSTTFTIPLTRYTTRLISSDRHRPLLADCA----EDHSDSDDFSRR 66

Query: 64  VLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVF 123
              R   S+  PILVLD+ WNL FV +SV VL  +  E+P+ PLR W+SGY +QCL HV 
Sbjct: 67  SFIRENCSYSMPILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVG 126

Query: 124 FVFVAYLRRSSRYRLGFENRGA 145
           FVF  Y R  + +  GFE+R A
Sbjct: 127 FVFFEYQRSMAHH--GFEDRAA 142

[Close]

BLAST of MELO3C019149.2.1 vs. TrEMBL
Match: tr|A0A0A0LEQ8|A0A0A0LEQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G816170 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.4e-19
Identity = 59/142 (41.55%), Postives = 82/142 (57.75%), Query Frame = 0


Query: 4   VRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHR-GVIFGDCADPRVDDEEDDNEYDRR 63
           +RP+ +  L    T+S+ F +PL +    LI   R   +  DCA    +D  D +++ RR
Sbjct: 7   LRPTLNHSLLRYPTVSTTFTIPLTRYTTRLISSDRHRPLLADCA----EDHSDSDDFSRR 66

Query: 64  VLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFHVF 123
              R   S+  PILVLD+ WNL FV +SV VL  +  E+P+ PLR W+SGY +QCL HV 
Sbjct: 67  SFIRENCSYSMPILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYGLQCLLHVG 126

Query: 124 FVFVAYLRRSSRYRLGFENRGA 145
           FVF  Y R  + +  GFE+R A
Sbjct: 127 FVFFEYQRSMAHH--GFEDRTA 142

[Close]

BLAST of MELO3C019149.2.1 vs. TrEMBL
Match: tr|A0A2P5E548|A0A2P5E548_PARAD (43kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_002190 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 7.7e-18
Identity = 67/164 (40.85%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 1   MDDVRPSNSAFLSWQRTMS-------SRFALPLIQDAANLIM-EHRGVIFGDCADPRVD- 60
           M++ +P N    S  R+ S       + F LPL +  + L   EH  +  GDCA  R D 
Sbjct: 1   MEEEQPLNGGGASVGRSDSFLRGPIRATFTLPLTRYPSRLFSGEHHRIFLGDCAGRRSDV 60

Query: 61  -DEEDDNEYDRRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWL 120
            D         R     G ++ KPILVLD+ WNL FV +SV VL+ + +EKP+ PLR W+
Sbjct: 61  GDXXXXXXXXXRSFSGEGCAYSKPILVLDVVWNLAFVLVSVVVLLSTFKEKPSTPLRVWI 120

Query: 121 SGYAVQCLFHVFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNR 155
            GY+VQC+FHV FV+  Y RR     LGF   GA     LSH R
Sbjct: 121 VGYSVQCVFHVGFVYFHYRRRGFADLLGF---GA---FSLSHRR 158

The following BLAST results are available for this feature:

BLAST of MELO3C019149.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455807.1	1.0e-82	100.00	PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Cucumis melo]	[more]
XP_004144310.1	9.7e-81	97.44	PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >KGN54665.1 h...	[more]
XP_022154475.1	1.5e-73	87.82	E3 ubiquitin-protein ligase At4g11680-like [Momordica charantia]	[more]
XP_022949865.1	1.7e-69	85.90	E3 ubiquitin-protein ligase At1g63170-like [Cucurbita moschata]	[more]
XP_023543467.1	1.7e-69	85.90	E3 ubiquitin-protein ligase At1g63170-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MELO3C019149.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68070.1	3.6e-13	42.65	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT3G61180.1	4.7e-13	51.61	RING/U-box superfamily protein	[more]
AT1G12760.1	2.6e-11	33.01	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT4G11680.1	2.6e-11	49.15	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT2G01735.1	4.9e-10	42.42	RING-finger protein for embryogenesis	[more]

BLAST of MELO3C019149.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LN71\|RING1_ARATH	4.7e-10	33.01	E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g127...	[more]
sp\|Q93Z92\|RING4_ARATH	4.7e-10	49.15	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g116...	[more]
sp\|Q8GUU2\|RIE1_ARATH	8.8e-09	42.42	E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV...	[more]
sp\|Q8LDB8\|RING2_ARATH	1.5e-08	51.02	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631...	[more]

BLAST of MELO3C019149.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C1Q6\|A0A1S3C1Q6_CUCME	6.9e-83	100.00	E3 ubiquitin-protein ligase At1g63170-like OS=Cucumis melo OX=3656 GN=LOC1034959...	[more]
tr\|A0A0A0KYD1\|A0A0A0KYD1_CUCSA	6.4e-81	97.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G418580 PE=4 SV=1	[more]
tr\|A0A1S3B880\|A0A1S3B880_CUCME	1.4e-19	41.55	E3 ubiquitin-protein ligase At4g11680-like OS=Cucumis melo OX=3656 GN=LOC1034868...	[more]
tr\|A0A0A0LEQ8\|A0A0A0LEQ8_CUCSA	2.4e-19	41.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G816170 PE=4 SV=1	[more]
tr\|A0A2P5E548\|A0A2P5E548_PARAD	7.7e-18	40.85	43kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_002190...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C019149.2	MELO3C019149.2	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C019149.2.1.exon.1	MELO3C019149.2.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C019149.2.1.five_prime_UTR.1	MELO3C019149.2.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C019149.2.1.CDS.1	MELO3C019149.2.1.CDS.1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C019149.2.1	MELO3C019149.2.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 18..132
None	No IPR available	PANTHER	PTHR14155:SF114	SUBFAMILY NOT NAMED	coord: 18..132