MELO3C032742.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C032742.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Myb/SANT-like DNA-binding domain protein
Location	chr07 : 16566189 .. 16568503 (-)
Sequence length	1171

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGCAATGTTCCTCCATATTGTTGCGCACGACGTGAAAAACCGTGTCATTCAACGGGAGTTCATGCGGTCGGGTGAGACAATTTTCCGTCATTTTAACATGGTCTTGTTGGCCGTTATTCGGCTTCATGACGAGCTTTTGAAAAAACCACAACCAGTAAATAGTGATTGCACATATCAAAGATGGAGGTGGTTTGAGGTGCCTATTTCTCTCCAACTACGTACTTCAAACCCAACGACGTTAGGTCTTCCCAATAATCTTTAGTTATGTGTTGCAGAATTGCCTAGGTGCATTAGATGAAACATACATAAAAGTCAACGTTCCAGCAAGTGACCGGGCTAGATATAGAACACGCAAAGGAGAGGTGGCCACAAATGTACTTGGCGCGTGTGACACAAAAGGAGATTTTGTTTATGTACTTGCCGGTTAGGAAGGATCAGTTGCGGACTCACGCATTCTCCTTGATGCCATTTCAAGACCTAATGGCCTGAAGGTGTCCAAGGGTAATATCCTACGACATTGTACATATGAATGAAATTATGCAATTAACAGCTACGACATTTTAATCGTGCAATGTGATCACAGGGTATTACTACTTGGTTTATGCGGGTAACCCAAATGCCGATGGTTTTCTAGCACCGTACAGAGGCCAACGCTACCACTTGCAGGAATGGCGTGGCGCTGAAAATGCACCTTCAACGTCGAAAGAGTTCTTTAATATGAAGCATTCGTCTACTCATAATATAATCGAAAGAGCATTCGGTGTCTTGAAGGGTCGATGGGCAATATTGCGGGAAAAGTCATACTACCCTGTAAAAGTCCAATGTCGCACAATACTCACATGTTGTCTCCTCCACAACCTTATCAATAGAGAGATGACAAACTTTGATATAGAAGACAACATAGATGAGGTTGATTCCACTCACGCGACTACTGCCGCCGATGACATACATTACATAGAGACGTCCAATGAGTGGACTCAATGGAGGGACGACCTTTCAGAAGAAATGTTTAATGTTTGGGAGTTGCGTAACTAGTAGAAAAATAAAATGTTTCCGGTTCATTTTCATACTTAAGTAGTGATTGCACTGGGTCTTATTTTGTCATAGTTTTTGGAATATGATTATTTTGAATGTATTGGTTATGATAGTAAATTAATGCCAGACTGTTTTTCACTAGGAGTTGACTGTACTATGAAACTAATCGTATGTATGTTATCTAATCATAGGAAAATTAATGAAACTAAGATGTTTGCGTTTGACATCTAGCATGACAAGTTCATCGAGACTACCTAAACACAGTTGGACTAAAGAAGAAGAGGCAGGCCTCGTTGAGTGCCTCGTGGAGTTGGTCAATGCTAGTGGGTGGAGGTCCGACAACGGAACCTTTTGCCCCGAGTACTTAAATCAACTGGCGAGAATGATGGCCTTCAAGATCCCAGGTTGTAATATCCATGCTTCAACGATCGATAGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAACGTGTAGTGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTCACAGAGAAAGAAGTCTTCGACGATTGGGTCAAGGTGTGTTACTAGTCATTTGAATGGTTACAGTACTATATTTTAATAAATGGACTAACAATTTATTATTGCACTTATATAGAGTCATCCGGTGGCGAAGGGCCTTCTTAATAAGTCGTTTCCCCACTATGACGAACGATTGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGGGCCAAGAGTTTTGCAGACGTTGGGTCAAACAATCCTGTTGGGTATGACGCATTTGTCGCTGACGCTACTCCGGATACGGACTTCCCGCCAATGTACAGTCAGGGATTGAACATGTCGCCTGATGATTTGATGGGAACAAGAATCACTCGGGTCAGTGAGCGTAGGAATGTTTCAAGCGGGTCTAAGCAAAAACGTGCATGACATGTCGCAGATAGTGGGGACATAGTTAGCACTACGATTGAGTACGAAAATGAACAACTGAACCGCATTGCTGAATGGCCTGTCCTACAACGTCAAGACGCAAGCCAAACACGTCAAGAGGTTGTCCGACAGTTGGAGGCCATCTTCCTGAGCTGACATTGATGGATAGGTGTAGCTTAATGTGTATACTTATGCGTAACGTCGATGACATAAAAGCTTTCCTTGACGTTCCGACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAATCGATGATTAGTTTGTTTGTTGTATTTGTATTAATGAAACTTTTCTTACTTCGAC

mRNA sequence

ATGGTAGCAATGTTCCTCCATATTGTTGCGCACGACGTGAAAAACCGTGTCATTCAACGGGAGTTCATGCGGTCGGGTGAGACAATTTTCCGTCATTTTAACATGGTCTTGTTGGCCGTTATTCGGCTTCATGACGAGCTTTTGAAAAAACCACAACCAGTAAATAGAAAATTAATGAAACTAAGATGTTTGCGTTTGACATCTAGCATGACAAGTTCATCGAGACTACCTAAACACAGTTGGACTAAAGAAGAAGAGGCAGGCCTCGTTGAGTGCCTCGTGGAGTTGGTCAATGCTAGTGGGTGGAGGTCCGACAACGGAACCTTTTGCCCCGAGTACTTAAATCAACTGGCGAGAATGATGGCCTTCAAGATCCCAGGTTGTAATATCCATGCTTCAACGATCGATAGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAACGTGTAGTGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTCACAGAGAAAGAAGTCTTCGACGATTGGGTCAAGAGTCATCCGGTGGCGAAGGGCCTTCTTAATAAGTCGTTTCCCCACTATGACGAACGATTGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGGGCCAAGAGTTTTGCAGACGTTGGGTCAAACAATCCTGTTGGGTATGACGCATTTGTCGCTGACGCTACTCCGGATACGGACTTCCCGCCAATGTACAGTCAGGGATTGAACATGTCGCCTGATGATTTGATGGGAACAAGAATCACTCGGGTCAGTGAGCGTAGGAATGTTTCAAGCGGGTCTAAGCAAAAACGTGCATGACATGTCGCAGATAGTGGGGACATAGTTAGCACTACGATTGAGTACGAAAATGAACAACTGAACCGCATTGCTGAATGGCCTGTCCTACAACGTCAAGACGCAAGCCAAACACGTCAAGAGGTTGTCCGACAGTTGGAGGCCATCTTCCTGAGCTGACATTGATGGATAGGTGTAGCTTAATGTGTATACTTATGCGTAACGTCGATGACATAAAAGCTTTCCTTGACGTTCCGACAATATGAAGTACCCGTACTGCAGCATCATTCTTCAAGAAAATCGATGATTAGTTTGTTTGTTGTATTTGTATTAATGAAACTTTTCTTACTTCGAC

Coding sequence (CDS)

ATGGTAGCAATGTTCCTCCATATTGTTGCGCACGACGTGAAAAACCGTGTCATTCAACGGGAGTTCATGCGGTCGGGTGAGACAATTTTCCGTCATTTTAACATGGTCTTGTTGGCCGTTATTCGGCTTCATGACGAGCTTTTGAAAAAACCACAACCAGTAAATAGAAAATTAATGAAACTAAGATGTTTGCGTTTGACATCTAGCATGACAAGTTCATCGAGACTACCTAAACACAGTTGGACTAAAGAAGAAGAGGCAGGCCTCGTTGAGTGCCTCGTGGAGTTGGTCAATGCTAGTGGGTGGAGGTCCGACAACGGAACCTTTTGCCCCGAGTACTTAAATCAACTGGCGAGAATGATGGCCTTCAAGATCCCAGGTTGTAATATCCATGCTTCAACGATCGATAGCCGAATCAAATTGATGAAGAGAATGTTCCATGCACTTGCGGAGATGCGTGGCCCAACGTGTAGTGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTCACAGAGAAAGAAGTCTTCGACGATTGGGTCAAGAGTCATCCGGTGGCGAAGGGCCTTCTTAATAAGTCGTTTCCCCACTATGACGAACGATTGTACGTGTTTGGCAAAGATCGTGCAACAGGAGGCCGGGCCAAGAGTTTTGCAGACGTTGGGTCAAACAATCCTGTTGGGTATGACGCATTTGTCGCTGACGCTACTCCGGATACGGACTTCCCGCCAATGTACAGTCAGGGATTGAACATGTCGCCTGATGATTTGATGGGAACAAGAATCACTCGGGTCAGTGAGCGTAGGAATGTTTCAAGCGGGTCTAAGCAAAAACGTGCATGA

Protein sequence

MVAMFLHIVAHDVKNRVIQREFMRSGETIFRHFNMVLLAVIRLHDELLKKPQPVNRKLMKLRCLRLTSSMTSSSRLPKHSWTKEEEAGLVECLVELVNASGWRSDNGTFCPEYLNQLARMMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPHYDERLYVFGKDRATGGRAKSFADVGSNNPVGYDAFVADATPDTDFPPMYSQGLNMSPDDLMGTRITRVSERRNVSSGSKQKRA

Homology

[Close]

BLAST of MELO3C032742.2.1 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 383.6 bits (984), Expect = 5.5e-103
Identity = 241/493 (48.88%), Postives = 253/493 (51.32%), Query Frame = 0


Query: 1   MVAMFLHIVAHDVKNRVIQREFMRSGETIFRHFNMVLLAVIRLHDELLKKPQPV------ 60
           MVAMFLHI+AHDVK+RVI+REFMRSGETI RHFNMVLLAVIRLH+ELLKKPQPV      
Sbjct: 72  MVAMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTD 131

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 132 QRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEG 191

Query: 121 ---------------NR-KLMK-------------------------------------- 180
                          NR K+ K                                      
Sbjct: 192 SAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPS 251

Query: 181 ----------------------------------------------LRCLRL-------- 240
                                                         L C  L        
Sbjct: 252 TSKEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM 311

Query: 241 ----------------------------TSS-------------MTSSSRLPKHSWTKEE 279
                                       TS+             MTSSSRLPKH+WTKEE
Sbjct: 312 TNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIMTSSSRLPKHTWTKEE 371

[Close]

BLAST of MELO3C032742.2.1 vs. NCBI nr
Match: XP_008466949.1 (PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo])

HSP 1 Score: 345.1 bits (884), Expect = 2.2e-91
Identity = 165/191 (86.39%), Postives = 170/191 (89.01%), Query Frame = 0


Query: 70  MTSSSRLPKHSWTKEEEAGLVECLVELVNASGWRSDNGTFCPEYLNQLARMMAFKIPGCN 129
           MTSSSRLPKH+WTKEEEAG    LVELVN  GWRSDNGTF P YLNQLARMMAFKIPG N
Sbjct: 1   MTSSSRLPKHTWTKEEEAG----LVELVNVGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 130 IHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGL 189
           IHASTIDSRIKLMKRMFHALAEMRGP CSGFGWNDE+KCIV EKEVFDDWVKSHP AKGL
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPTAKGL 120

Query: 190 LNKSFPHYDERLYVFGKDRATGGRAKSFADVGSNNPVGYDAFVADATPDTDFPPMYSQGL 249
           LNKSF HYDE  YVFGKDRATGGRA+SFAD+GSN+P GYDAF ADA PDTDFPPMYS  L
Sbjct: 121 LNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFPPMYSLRL 180

Query: 250 NMSPDDLMGTR 261
           NMSPDDLM TR
Sbjct: 181 NMSPDDLMETR 187

[Close]

BLAST of MELO3C032742.2.1 vs. NCBI nr
Match: XP_008459131.1 (PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo])

HSP 1 Score: 342.0 bits (876), Expect = 1.9e-90
Identity = 169/208 (81.25%), Postives = 178/208 (85.58%), Query Frame = 0


Query: 70  MTSSSRLPKHSWTKEEEAGLVECLVELVNASGWRSDNGTFCPEYLNQLARMMAFKIPGCN 129
           MTSSSRLPKH+WTKEEEA     LVELVNA GWRSDNGTF P YLNQLARMMAFKIPGCN
Sbjct: 1   MTSSSRLPKHTWTKEEEAS----LVELVNAGGWRSDNGTFHPGYLNQLARMMAFKIPGCN 60

Query: 130 IHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGL 189
           IHASTIDSRIKL+KRMFHALAEMRGP CSGFGWNDE+KCIV EKE       SHP AKGL
Sbjct: 61  IHASTIDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKE-------SHPAAKGL 120

Query: 190 LNKSFPHYDERLYVFGKDRATGGRAKSFADVGSNNPVGYDAFVADATPDTDFPPMYSQGL 249
           LNKSF HYDE  YVFGKDRATGGRA+ FAD+GSN+P GYDAFVADA PDT+F PMYS  L
Sbjct: 121 LNKSFVHYDELSYVFGKDRATGGRAEIFADIGSNDPAGYDAFVADAAPDTNFSPMYSPRL 180

Query: 250 NMSPDDLMGTRITRVSERRNVSSGSKQK 278
           NMSPDDLM TR  RVSERRNVSSGS++K
Sbjct: 181 NMSPDDLMETRTARVSERRNVSSGSRRK 197

[Close]

BLAST of MELO3C032742.2.1 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 1.4e-69
Identity = 129/211 (61.14%), Postives = 163/211 (77.25%), Query Frame = 0


Query: 70  MTSSSRLPKHSWTKEEEAGLVECLVELVNASGWRSDNGTFCPEYLNQLARMMAFKIPGCN 129
           M S SR PKH+WTKEEE   VECLVELV++ GWRSDNGTF P YL QL RMMA K+PG N
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 130 I-HASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKG 189
           I  +STID  +K +K+ +HA+AEMRGP+CSGFGWN+E +CI+ E+++FD W+KSHP AKG
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 190 LLNKSFPHYDERLYVFGKDRATGGRAKSFADVGSN-NPVGYDAFVADATPDTDFPPMYSQ 249
           LL+KSFP+YD+  YVFGKDRATG R+++F +VGSN + +  D      + D D P MYSQ
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 250 GLNMSPDDLMGTRITRVSERRNVSSGSKQKR 279
           G++MSPD++ G R  + SERRN SS SK+KR
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKR 211

[Close]

BLAST of MELO3C032742.2.1 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 225.3 bits (573), Expect = 2.5e-55
Identity = 162/468 (34.62%), Postives = 205/468 (43.80%), Query Frame = 0


Query: 1   MVAMFLHIVAHDVKNRVIQREFMRSGETIFRHFNMVLLAVIRLHDELLKKPQPVNRKL-- 60
           MVAMFLH++AHDVKNRVIQ+EF+RSGET+ RHFN+VLLAV+RL++EL+K+P PV      
Sbjct: 44  MVAMFLHVLAHDVKNRVIQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCND 103

Query: 61  ----------------------------------------------MK------------ 120
                                                         MK            
Sbjct: 104 QRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEG 163

Query: 121 ----LRCLRLTSSMTSSSRLP--------------------------------------- 180
                R LR   S  +  ++P                                       
Sbjct: 164 SAADSRILRDAISQENGLQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPT 223

Query: 181 --------KHS----------------WT------------------------------- 240
                   KHS                WT                               
Sbjct: 224 NAKEYFNMKHSSARNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREM 283

Query: 241 ------KEEEAG--------------LVE---------------------------CLVE 261
                 ++E+ G               +E                           C +E
Sbjct: 284 TYCNDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLATSMFTDWQFRGGDSCGME 343

[Close]

BLAST of MELO3C032742.2.1 vs. TAIR10
Match: AT1G30140.1 (unknown protein)

HSP 1 Score: 75.9 bits (185), Expect = 4.5e-14
Identity = 41/143 (28.67%), Postives = 69/143 (48.25%), Query Frame = 0


Query: 77  PKHSWTKEEEAGLVECLVELVNASGWRSDNGTFCPEYLNQLARMMAFKIPGCNIHASTID 136
           P + WT +E     + L+EL+    WR  +G      +         K  GCN +     
Sbjct: 13  PYNQWTPDE----TDVLIELIR-QNWRDSSGIIGKLTVESKLLPALNKRLGCNKNHKNYM 72

Query: 137 SRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGLLNKSFPH 196
           SR+K +K ++ +  +++    SGFGW+ E K      EV+ D++K+HP  K +  +S  H
Sbjct: 73  SRLKFLKNLYQSYLDLK-RFSSGFGWDPETKKFTAPDEVWRDYLKAHPNHKHMQTESIDH 132

Query: 197 YDERLYVFGKDRATGGRAKSFAD 220
           +++   +FG   ATG  A   +D
Sbjct: 133 FEDLQIIFGDVVATGSFAVGMSD 149

[Close]

BLAST of MELO3C032742.2.1 vs. TAIR10
Match: AT4G02210.1 (unknown protein)

HSP 1 Score: 51.6 bits (122), Expect = 9.1e-07
Identity = 36/145 (24.83%), Postives = 66/145 (45.52%), Query Frame = 0


Query: 68  SSMTSSSRLPKHSWTKEEEAGLVECLVELVNASGWRSDNGTFCPEYLNQLARMMAFKIPG 127
           SS   + RL +  WT E +   +E +VE V     R  N      + + L    A+K   
Sbjct: 2   SSRNGNERL-RTVWTPEMDQYFIELMVEQV-----RKGN-----RFEDHLFSKRAWKFMS 61

Query: 128 CNIHA--------STIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDW 187
           C+  A          + +R K ++ +F ++  +      GF W+D ++ +V +  V+D++
Sbjct: 62  CSFTAKFKFLYGKDVLKNRHKTLRNLFKSVNNLL--IEDGFSWDDTRQMVVADNCVWDEY 121

Query: 188 VKSHPVAKGLLNKSFPHYDERLYVF 205
           +K HP ++    KS P Y +   V+
Sbjct: 122 LKIHPDSRSFRIKSIPCYKDLCLVY 133

[Close]

BLAST of MELO3C032742.2.1 vs. TAIR10
Match: AT2G24960.1 (unknown protein)

HSP 1 Score: 49.3 bits (116), Expect = 4.5e-06
Identity = 42/182 (23.08%), Postives = 72/182 (39.56%), Query Frame = 0


Query: 68  SSMTSSSRLPKHSWTKEEEAGLVECLVELVNASGWRSDNGTFCPEYLNQLARMMA--FKI 127
           S + S     K  WT E +   VE +V+ +   G ++ N      +++ L    A     
Sbjct: 159 SVVLSGKESSKTEWTLEMDQYFVEIMVDQI-GRGNKTGNAFSKQAWIDMLVLFNARFSGQ 218

Query: 128 PGCNIHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPV 187
            G  +     +  +K  K M   L E       GF W++ +  I  +  V+D ++K HP+
Sbjct: 219 YGKRVLRHRYNKLLKYYKDMEAILKE------DGFSWDETRLMISADDAVWDSYIKDHPL 278

Query: 188 AKGLLNKSFPHYDERLYVF------GKDRATGGRAKSFADVGSNNPVGYDAFVADATPDT 242
           A+    KS P Y++   +F      G D    G A   ++  ++     D      TP  
Sbjct: 279 ARTYRMKSLPSYNDLDTIFACQAEQGTDHRDDGSAAQTSETKASQEQNSDRTRIFWTPPM 333

[Close]

BLAST of MELO3C032742.2.1 vs. TAIR10
Match: AT5G41980.1 (Putative harbinger transposase-derived nuclease (InterPro:IPR006912))

HSP 1 Score: 46.2 bits (108), Expect = 3.8e-05
Identity = 22/48 (45.83%), Postives = 32/48 (66.67%), Query Frame = 0


Query: 2   VAMFLHIVAHDVKNRVIQREFMRSGETIFRHFNMVLLAVIRLHDELLK 50
           +A+FL I+ H+++ R +Q  F  SGETI RHFN VL AVI +  +  +
Sbjct: 78  LAIFLFIIGHNLRTRAVQELFCYSGETISRHFNNVLNAVIAISKDFFQ 125

[Close]

BLAST of MELO3C032742.2.1 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 3.7e-103
Identity = 241/493 (48.88%), Postives = 253/493 (51.32%), Query Frame = 0


Query: 1   MVAMFLHIVAHDVKNRVIQREFMRSGETIFRHFNMVLLAVIRLHDELLKKPQPV------ 60
           MVAMFLHI+AHDVK+RVI+REFMRSGETI RHFNMVLLAVIRLH+ELLKKPQPV      
Sbjct: 72  MVAMFLHILAHDVKSRVIKREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTD 131

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 132 QRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVYVLAGWEG 191

Query: 121 ---------------NR-KLMK-------------------------------------- 180
                          NR K+ K                                      
Sbjct: 192 SAADSRILRDALSRPNRLKVPKGYYYLVDVGYPNAEGFLAPYRGQRYHLQEWRGPENAPS 251

Query: 181 ----------------------------------------------LRCLRL-------- 240
                                                         L C  L        
Sbjct: 252 TSKEFFNMKHYSARNVIERAFGVLKGRWAILRGKSYYPVEVQCRTILACCLLHNLINREM 311

Query: 241 ----------------------------TSS-------------MTSSSRLPKHSWTKEE 279
                                       TS+             MTSSSRLPKH+WTKEE
Sbjct: 312 TNFDIEDNIDEVDSTHATTAADDIHYIETSNEWSQWRDNLAEEIMTSSSRLPKHTWTKEE 371

[Close]

BLAST of MELO3C032742.2.1 vs. TrEMBL
Match: tr|A0A1S3CTN6|A0A1S3CTN6_CUCME (uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.4e-91
Identity = 165/191 (86.39%), Postives = 170/191 (89.01%), Query Frame = 0


Query: 70  MTSSSRLPKHSWTKEEEAGLVECLVELVNASGWRSDNGTFCPEYLNQLARMMAFKIPGCN 129
           MTSSSRLPKH+WTKEEEAG    LVELVN  GWRSDNGTF P YLNQLARMMAFKIPG N
Sbjct: 1   MTSSSRLPKHTWTKEEEAG----LVELVNVGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 130 IHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGL 189
           IHASTIDSRIKLMKRMFHALAEMRGP CSGFGWNDE+KCIV EKEVFDDWVKSHP AKGL
Sbjct: 61  IHASTIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWVKSHPTAKGL 120

Query: 190 LNKSFPHYDERLYVFGKDRATGGRAKSFADVGSNNPVGYDAFVADATPDTDFPPMYSQGL 249
           LNKSF HYDE  YVFGKDRATGGRA+SFAD+GSN+P GYDAF ADA PDTDFPPMYS  L
Sbjct: 121 LNKSFVHYDELSYVFGKDRATGGRAESFADIGSNDPPGYDAFAADAMPDTDFPPMYSLRL 180

Query: 250 NMSPDDLMGTR 261
           NMSPDDLM TR
Sbjct: 181 NMSPDDLMETR 187

[Close]

BLAST of MELO3C032742.2.1 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.2e-90
Identity = 169/208 (81.25%), Postives = 178/208 (85.58%), Query Frame = 0


Query: 70  MTSSSRLPKHSWTKEEEAGLVECLVELVNASGWRSDNGTFCPEYLNQLARMMAFKIPGCN 129
           MTSSSRLPKH+WTKEEEA     LVELVNA GWRSDNGTF P YLNQLARMMAFKIPGCN
Sbjct: 1   MTSSSRLPKHTWTKEEEAS----LVELVNAGGWRSDNGTFHPGYLNQLARMMAFKIPGCN 60

Query: 130 IHASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKGL 189
           IHASTIDSRIKL+KRMFHALAEMRGP CSGFGWNDE+KCIV EKE       SHP AKGL
Sbjct: 61  IHASTIDSRIKLLKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKE-------SHPAAKGL 120

Query: 190 LNKSFPHYDERLYVFGKDRATGGRAKSFADVGSNNPVGYDAFVADATPDTDFPPMYSQGL 249
           LNKSF HYDE  YVFGKDRATGGRA+ FAD+GSN+P GYDAFVADA PDT+F PMYS  L
Sbjct: 121 LNKSFVHYDELSYVFGKDRATGGRAEIFADIGSNDPAGYDAFVADAAPDTNFSPMYSPRL 180

Query: 250 NMSPDDLMGTRITRVSERRNVSSGSKQK 278
           NMSPDDLM TR  RVSERRNVSSGS++K
Sbjct: 181 NMSPDDLMETRTARVSERRNVSSGSRRK 197

[Close]

BLAST of MELO3C032742.2.1 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.1e-70
Identity = 129/211 (61.14%), Postives = 163/211 (77.25%), Query Frame = 0


Query: 70  MTSSSRLPKHSWTKEEEAGLVECLVELVNASGWRSDNGTFCPEYLNQLARMMAFKIPGCN 129
           M S SR PKH+WTKEEE   VECLVELV++ GWRSDNGTF P YL QL RMMA K+PG N
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 130 I-HASTIDSRIKLMKRMFHALAEMRGPTCSGFGWNDEQKCIVTEKEVFDDWVKSHPVAKG 189
           I  +STID  +K +K+ +HA+AEMRGP+CSGFGWN+E +CI+ E+++FD W+KSHP AKG
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 190 LLNKSFPHYDERLYVFGKDRATGGRAKSFADVGSN-NPVGYDAFVADATPDTDFPPMYSQ 249
           LL+KSFP+YD+  YVFGKDRATG R+++F +VGSN + +  D      + D D P MYSQ
Sbjct: 121 LLHKSFPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQ 180

Query: 250 GLNMSPDDLMGTRITRVSERRNVSSGSKQKR 279
           G++MSPD++ G R  + SERRN SS SK+KR
Sbjct: 181 GVHMSPDEMFGIRAGQASERRNCSSVSKRKR 211

[Close]

BLAST of MELO3C032742.2.1 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.7e-55
Identity = 162/468 (34.62%), Postives = 205/468 (43.80%), Query Frame = 0


Query: 1   MVAMFLHIVAHDVKNRVIQREFMRSGETIFRHFNMVLLAVIRLHDELLKKPQPVNRKL-- 60
           MVAMFLH++AHDVKNRVIQ+EF+RSGET+ RHFN+VLLAV+RL++EL+K+P PV      
Sbjct: 44  MVAMFLHVLAHDVKNRVIQQEFVRSGETVSRHFNIVLLAVLRLYEELIKRPVPVTSNCND 103

Query: 61  ----------------------------------------------MK------------ 120
                                                         MK            
Sbjct: 104 QRWKCFENCLGALDGTYIKVNVPAGDRPTFRTRKGEIATNVLGVCDMKGDFVYVLAGWEG 163

Query: 121 ----LRCLRLTSSMTSSSRLP--------------------------------------- 180
                R LR   S  +  ++P                                       
Sbjct: 164 SAADSRILRDAISQENGLQVPKGYYYLCDAGYPNAEGFLAPYKGQRYHLQEWRGAANAPT 223

Query: 181 --------KHS----------------WT------------------------------- 240
                   KHS                WT                               
Sbjct: 224 NAKEYFNMKHSSARNVIERAFGVLKGRWTILRGKSYYPLQVQCRTILACTLLHNLINREM 283

Query: 241 ------KEEEAG--------------LVE---------------------------CLVE 261
                 ++E+ G               +E                           C +E
Sbjct: 284 TYCNDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLATSMFTDWQFRGGDSCGME 343

The following BLAST results are available for this feature:

BLAST of MELO3C032742.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34114.1	5.5e-103	48.88	retrotransposon protein [Cucumis melo subsp. melo]	[more]
XP_008466949.1	2.2e-91	86.39	PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo]	[more]
XP_008459131.1	1.9e-90	81.25	PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo]	[more]
XP_008441954.1	1.4e-69	61.14	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]	[more]
ADN33754.1	2.5e-55	34.62	retrotransposon protein [Cucumis melo subsp. melo]	[more]

BLAST of MELO3C032742.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G30140.1	4.5e-14	28.67	unknown protein	[more]
AT4G02210.1	9.1e-07	24.83	unknown protein	[more]
AT2G24960.1	4.5e-06	23.08	unknown protein	[more]
AT5G41980.1	3.8e-05	45.83	Putative harbinger transposase-derived nuclease (InterPro:IPR006912)	[more]

BLAST of MELO3C032742.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C032742.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GCB5\|E5GCB5_CUCME	3.7e-103	48.88	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3CTN6\|A0A1S3CTN6_CUCME	1.4e-91	86.39	uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=...	[more]
tr\|A0A1S3C8Z4\|A0A1S3C8Z4_CUCME	1.2e-90	81.25	uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=...	[more]
tr\|A0A1S3B4L3\|A0A1S3B4L3_CUCME	9.1e-70	61.14	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
tr\|E5GBB2\|E5GBB2_CUCME	1.7e-55	34.62	Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR024752	Myb/SANT-like_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C032742.2	MELO3C032742.2	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C032742.2.1	MELO3C032742.2.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032742.2.1.exon.3	MELO3C032742.2.1.exon.3	exon
MELO3C032742.2.1.exon.2	MELO3C032742.2.1.exon.2	exon
MELO3C032742.2.1.exon.1	MELO3C032742.2.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032742.2.1.CDS.3	MELO3C032742.2.1.CDS.3	CDS
MELO3C032742.2.1.CDS.2	MELO3C032742.2.1.CDS.2	CDS
MELO3C032742.2.1.CDS.1	MELO3C032742.2.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C032742.2.1.three_prime_UTR.1	MELO3C032742.2.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 80..177 e-value: 1.7E-8 score: 35.3
None	No IPR available	PANTHER	PTHR31704:SF62	SUBFAMILY NOT NAMED	coord: 77..220
None	No IPR available	PANTHER	PTHR31704	FAMILY NOT NAMED	coord: 77..220