MELO3C032492.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C032492.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Locationchr07 : 15090724 .. 15091849 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACTGAATATAGGTTTTTCTTCTTCTGTTTCAAATGATGAGTTATAAGAGACATCTCTTATTATTCTGATTTGAAGGAAAAAAGTTTATTTGAAAGTAAAAAAGTGCTTTCGAAGTATTTTTGCATGATAGCAGTGAAGAACAACTTTCAATTTAGGACAACGGTATCAAATTTGAGGTCTCTTGAATTTAGATGTCTGCAAGAAGGTTGCAAATGGTTTGTAAGGGCATCTCGTTATAAGAAGAGTGATTTGTGGATGCTACGAAAATACACTTCTGACCATGATTGTTCATTGAGTACTGCCCAAAGTTCTCACATGCAAGCTTCTTCAACAGTAATTGACAATTGTTTGATAGATGATTTTAGATTCGTGTCTACTGATCATTCCATTCCTAAAGAGATTGTGCATAAGGCTCGTACAAATCTTGGAGTTAAATAAGTTACCAGAAAGCTTGGAGGGCAAAAGAACATATGGTAAAGATATTACATGGTGACACAGTTGAATCGTATGCATTGATTCTAGGATTCTTTGATAAATTGGTTGAATCTAACCCAGGTATGATCAGTTTTTTATATATAAACGATCGTTTAATATTGTTTAGATATTAAACGATCGTTTATAAACGATATTAGATATTAGTGTTGTATATGTAAACGATCACTTAATATTGTTTATGTGTAGTAAGAAGATCGCTTAGACCTTACTAAACGACCGCTTAAAGATATATATGCGATCATTTAAATATATATAAATGATCGCTTAACTAATATAAACGATCGCTTAACTAACATAAACGATCGCTTAACTAATATAAACGATCGCTTGTTTGTGCTGATAGAAATGTGTTTTTAATTATTATAGGTACATGCATTGCTTTAGAAATGGATGATAGTGGTCATTTCAAGTTTTGTTTTATGGCTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTATTATTTCTGTTGATGGGACATTTTTGAAGTGTAAGTTTGGTGGCATCCCATTAACAGCTTCATCACAAGATAGTAACAATCAAATCTTCCCTCTTGCTTTTGCCATTGTAGATTCTGAAAATGATGCATCATGGACATGGTTTTTTTTTTAGAAGATATGA

mRNA sequence

ATGTCACTGAATATAGGTTTTTCTTCTTCTGTTTCAAATGATGAGTTATAAGAGACATCTCTTATTATTCTGATTTGAAGGAAAAAAGTTTATTTGAAAGTAAAAAAGTGCTTTCGAAGTATTTTTGCATGATAGCAGTGAAGAACAACTTTCAATTTAGGACAACGGTATCAAATTTGAGGTCTCTTGAATTTAGATGTCTGCAAGAAGGTTGCAAATGGTTTGTAAGGGCATCTCGTTATAAGAAGAGTGATTTGTGGATGCTACGAAAATACACTTCTGACCATGATTGTTCATTGAGTACTGCCCAAAGTTCTCACATATTCGTGTCTACTGATCATTCCATTCCTAAAGAGATTGTGCATAAGGCTCGTACAAATCTTGGAGTTAAATAAGTTACCAGAAAGCTTGGAGGGCAAAAGAACATATGGTAAAGATATTACATGGTGACACAGTTGAATCGTATGCATTGATTCTAGGATTCTTTGATAAATTGGTTGAATCTAACCCAGGTACATGCATTGCTTTAGAAATGGATGATAGTGGTCATTTCAAGTTTTGTTTTATGGCTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTATTATTTCTGTTGATGGGACATTTTTGAAGTGTAAGTTTGGTGGCATCCCATTAACAGCTTCATCACAAGATAGTAACAATCAAATCTTCCCTCTTGCTTTTGCCATTGTAGATTCTGAAAATGATGCATCATGGACATGGTTTTTTTTTTAGAAGATATGA

Coding sequence (CDS)

ATGGTAAAGATATTACATGGTGACACAGTTGAATCGTATGCATTGATTCTAGGATTCTTTGATAAATTGGTTGAATCTAACCCAGGTACATGCATTGCTTTAGAAATGGATGATAGTGGTCATTTCAAGTTTTGTTTTATGGCTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTATTATTTCTGTTGATGGGACATTTTTGAAGTGTAAGTTTGGTGGCATCCCATTAACAGCTTCATCACAAGATAGTAACAATCAAATCTTCCCTCTTGCTTTTGCCATTGTAGATTCTGAAAATGATGCATCATGGACATGGTTTTTTTTTTAG

Protein sequence

MVKILHGDTVESYALILGFFDKLVESNPGTCIALEMDDSGHFKFCFMAFGASIEGWKYCRPIISVDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSENDASWTWFFF
BLAST of MELO3C032492.2 vs. NCBI nr
Match: XP_022155934.1 (uncharacterized protein LOC111022933 [Momordica charantia])

HSP 1 Score: 143.3 bits (360), Expect = 5.0e-31
Identity = 68/108 (62.96%), Postives = 78/108 (72.22%), Query Frame = 0

Query: 3   KILHGDTVESYALILGFFDKLVESNPGTCIALEMDDSGHFKFCFMAFGASIEGWKYCRPI 62
           K+L GD  +SYALI   F KL E NP    A E+D + HFK+CFMA GASIE W+YCR  
Sbjct: 44  KLLTGDADDSYALIPKIFVKLKELNPCIYTAYEIDKTRHFKYCFMALGASIESWRYCRHN 103

Query: 63  ISVDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSENDASWTWFF 111
           IS+DGTFL  K+GG  LTAS+ D NNQ+FPL F IVDSEND SW WFF
Sbjct: 104 ISIDGTFLTSKYGGTLLTASTCDDNNQMFPLPFGIVDSENDVSWRWFF 151

BLAST of MELO3C032492.2 vs. NCBI nr
Match: XP_022895272.1 (uncharacterized protein LOC111409458 [Olea europaea var. sylvestris])

HSP 1 Score: 136.7 bits (343), Expect = 4.7e-29
Identity = 58/109 (53.21%), Postives = 77/109 (70.64%), Query Frame = 0

Query: 2   VKILHGDTVESYALILGFFDKLVESNPGTCIALEMDDSGHFKFCFMAFGASIEGWKYCRP 61
           +K+L GD  +S+  I  FF  L ++NPG+   LE+D    FK+CFMA G SI GWKYC+P
Sbjct: 281 LKVLRGDPTDSFNKIPAFFSVLQQTNPGSVTCLEIDGHNRFKYCFMALGTSIRGWKYCKP 340

Query: 62  IISVDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSENDASWTWFF 111
           ++ VDGT+L   +GG   TA +QD+NN I+ LAF I D+END+SWTWFF
Sbjct: 341 VVVVDGTYLNGHYGGTLFTACTQDANNSIYVLAFGIGDNENDSSWTWFF 389

BLAST of MELO3C032492.2 vs. NCBI nr
Match: XP_022847669.1 (uncharacterized protein LOC111370215 [Olea europaea var. sylvestris])

HSP 1 Score: 133.7 bits (335), Expect = 4.0e-28
Identity = 60/109 (55.05%), Postives = 76/109 (69.72%), Query Frame = 0

Query: 2   VKILHGDTVESYALILGFFDKLVESNPGTCIALEMDDSGHFKFCFMAFGASIEGWKYCRP 61
           +K++ GD  +S+  IL FF  L  +NPGT   LE+D    FK+CFMA  ASI GW +CRP
Sbjct: 281 LKLIRGDPADSFNNILRFFAMLQHTNPGTVTDLELDGHSRFKYCFMALVASIRGWGHCRP 340

Query: 62  IISVDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSENDASWTWFF 111
           ++ VDGT+L   +GG   TA +QD+NN I+ LAF I DSENDASWTWFF
Sbjct: 341 VVVVDGTYLSGHYGGTLFTACTQDANNSIYILAFGIRDSENDASWTWFF 389

BLAST of MELO3C032492.2 vs. NCBI nr
Match: XP_022871448.1 (protein FAR1-RELATED SEQUENCE 5-like [Olea europaea var. sylvestris])

HSP 1 Score: 132.9 bits (333), Expect = 6.8e-28
Identity = 57/109 (52.29%), Postives = 77/109 (70.64%), Query Frame = 0

Query: 2   VKILHGDTVESYALILGFFDKLVESNPGTCIALEMDDSGHFKFCFMAFGASIEGWKYCRP 61
           +K+L GD  + +  I  FF  L ++NPG+  +LE+D    FK+CFMA GASI GWK+CRP
Sbjct: 143 LKVLRGDPTDLFNKIPAFFSVLQQTNPGSVTSLEIDGHNRFKYCFMALGASIRGWKHCRP 202

Query: 62  IISVDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSENDASWTWFF 111
           ++ VD T+L   +GG   TA +QD+NN I+ LAF I D+END+SWTWFF
Sbjct: 203 VVVVDDTYLNGHYGGTLFTACTQDANNSIYVLAFGIGDNENDSSWTWFF 251

BLAST of MELO3C032492.2 vs. NCBI nr
Match: XP_006847242.1 (protein FAR1-RELATED SEQUENCE 4, partial [Amborella trichopoda] >ERN08823.1 hypothetical protein AMTR_s04652p00001680, partial [Amborella trichopoda])

HSP 1 Score: 131.7 bits (330), Expect = 1.5e-27
Identity = 59/106 (55.66%), Postives = 76/106 (71.70%), Query Frame = 0

Query: 5   LHGDTVESYALILGFFDKLVESNPGTCIALEMDDSGHFKFCFMAFGASIEGWKYCRPIIS 64
           L G   ESY L+ GF   L ++NPGT + +E +D   FK+ F+A  ASI+GWK C+PII 
Sbjct: 245 LRGKANESYRLLPGFLHMLQKTNPGTIVHMETEDDNSFKYLFVALDASIKGWKKCKPIIV 304

Query: 65  VDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSENDASWTWFF 111
           VDGTFLK  +GG  L+A +QD+N  IFPLAF++VDSEN+ SW WFF
Sbjct: 305 VDGTFLKSTYGGTLLSACTQDANGHIFPLAFSVVDSENNNSWQWFF 350

BLAST of MELO3C032492.2 vs. TAIR10
Match: AT1G49920.1 (MuDR family transposase)

HSP 1 Score: 69.7 bits (169), Expect = 1.3e-12
Identity = 42/114 (36.84%), Postives = 59/114 (51.75%), Query Frame = 0

Query: 2   VKILHGDTVESYALILGFFDKLVESNPGTCIALEMDDSGH------FKFCFMAFGASIEG 61
           +K   GD  +S+ LI      L  SN G  +  + D   H      F+  F AF  SI+G
Sbjct: 316 IKRFFGDWDQSFRLIPKLMSVLHSSN-GLLVDWQYDSLTHDPEHASFRGLFWAFSQSIQG 375

Query: 62  WKYCRPIISVDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSENDASWTWF 110
           +++CRP+I VD   L  K+    + AS+ D+ NQ FPLAFA+    +  SW WF
Sbjct: 376 FQHCRPLIVVDTKNLGGKYKMKLMIASAFDATNQYFPLAFAVTKEVSVDSWRWF 428

BLAST of MELO3C032492.2 vs. TAIR10
Match: AT1G64260.1 (MuDR family transposase)

HSP 1 Score: 68.6 bits (166), Expect = 2.9e-12
Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 0

Query: 1   MVKILHGDTVESYALILGFFDKLVESNPGTCIALEMD-----DSGHFKFCFMAFGASIEG 60
           ++K + GD  +S+ ++         SN G  +  + D     D   F+  F +F  SIEG
Sbjct: 313 VIKRVFGDEDQSFRVMPKLISAFHSSN-GLLVDWQYDLFPNPDFASFRGVFWSFSQSIEG 372

Query: 61  WKYCRPIISVDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSENDASWTWFF 111
           +++CRP+I VD   L  K+    + AS  D+ N+ FPLAFA+    +  SW WFF
Sbjct: 373 FQHCRPLIVVDTKSLNGKYQLKLMIASGVDAANKFFPLAFAVTKEVSTDSWRWFF 426

BLAST of MELO3C032492.2 vs. TAIR10
Match: AT1G64255.1 (MuDR family transposase)

HSP 1 Score: 63.9 bits (154), Expect = 7.0e-11
Identity = 39/113 (34.51%), Postives = 57/113 (50.44%), Query Frame = 0

Query: 2   VKILHGDTVESYALILGFFDKLVESNPGTCIALEMD---DSGHFKFC--FMAFGASIEGW 61
           +K + GD  +S+         L  SN G  +  + D   +     FC  F AF  SIEG+
Sbjct: 321 IKRVFGDWDQSFEDFPKLMSALCSSN-GLLVDWKYDLFPNPNFASFCGVFWAFPQSIEGF 380

Query: 62  KYCRPIISVDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSENDASWTWF 110
           ++CRP+I VD   L C++    + AS  D+ N+ FPLAFA+    +   W WF
Sbjct: 381 QHCRPLIVVDTKNLNCEYQLKLMIASGVDAANKYFPLAFAVTKEVSTDIWRWF 432

BLAST of MELO3C032492.2 vs. TrEMBL
Match: tr|U5D175|U5D175_AMBTC (Uncharacterized protein (Fragment) OS=Amborella trichopoda OX=13333 GN=AMTR_s04652p00001680 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.0e-27
Identity = 59/106 (55.66%), Postives = 76/106 (71.70%), Query Frame = 0

Query: 5   LHGDTVESYALILGFFDKLVESNPGTCIALEMDDSGHFKFCFMAFGASIEGWKYCRPIIS 64
           L G   ESY L+ GF   L ++NPGT + +E +D   FK+ F+A  ASI+GWK C+PII 
Sbjct: 245 LRGKANESYRLLPGFLHMLQKTNPGTIVHMETEDDNSFKYLFVALDASIKGWKKCKPIIV 304

Query: 65  VDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSENDASWTWFF 111
           VDGTFLK  +GG  L+A +QD+N  IFPLAF++VDSEN+ SW WFF
Sbjct: 305 VDGTFLKSTYGGTLLSACTQDANGHIFPLAFSVVDSENNNSWQWFF 350

BLAST of MELO3C032492.2 vs. TrEMBL
Match: tr|A0A1U7X8I4|A0A1U7X8I4_NICSY (protein FAR1-RELATED SEQUENCE 4-like OS=Nicotiana sylvestris OX=4096 GN=LOC104234151 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.8e-27
Identity = 57/109 (52.29%), Postives = 77/109 (70.64%), Query Frame = 0

Query: 2   VKILHGDTVESYALILGFFDKLVESNPGTCIALEMDDSGHFKFCFMAFGASIEGWKYCRP 61
           ++ L GD  ESYA +  +   L+ SNPG+ + L   D  HF + F+A  ASI+GW++C+P
Sbjct: 261 LQFLRGDPSESYAKLPSYLYMLMHSNPGSVVCLRKSDEEHFMYAFVALYASIKGWEFCKP 320

Query: 62  IISVDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSENDASWTWFF 111
           I+ VDG+FLK  + G+ LTA SQD+  +IFPLA+AIVD ENDASW WFF
Sbjct: 321 IVVVDGSFLKATYRGMLLTACSQDAGGKIFPLAYAIVDKENDASWGWFF 369

BLAST of MELO3C032492.2 vs. TrEMBL
Match: tr|A0A1S4E392|A0A1S4E392_CUCME (uncharacterized protein LOC107991824 OS=Cucumis melo OX=3656 GN=LOC107991824 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.0e-27
Identity = 58/106 (54.72%), Postives = 74/106 (69.81%), Query Frame = 0

Query: 5   LHGDTVESYALILGFFDKLVESNPGTCIALEMDDSGHFKFCFMAFGASIEGWKYCRPIIS 64
           + G   +SYA++  F D L+ +NPGT  A E DD G FKF FMA  ASI+ W YC P+IS
Sbjct: 40  IRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFKFYFMALAASIDAWNYCVPVIS 99

Query: 65  VDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSENDASWTWFF 111
           VDG  +K K+ G  ++A + D N+QI PLAFA+VDSEND SW+WFF
Sbjct: 100 VDGAAMKNKYLGTLISACTVDGNSQIVPLAFAVVDSENDLSWSWFF 145

BLAST of MELO3C032492.2 vs. TrEMBL
Match: tr|K4D1E1|K4D1E1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.2e-26
Identity = 56/109 (51.38%), Postives = 75/109 (68.81%), Query Frame = 0

Query: 2   VKILHGDTVESYALILGFFDKLVESNPGTCIALEMDDSGHFKFCFMAFGASIEGWKYCRP 61
           VK++ GD  ESYA + G+F  L ++ PG+ + ++ ++   F + F+A  A I GW+YCRP
Sbjct: 85  VKLVRGDPTESYARLPGYFYILEQTYPGSVLKIKRNEDDTFLYAFVALEACIRGWEYCRP 144

Query: 62  IISVDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSENDASWTWFF 111
           I+ VDG  L C +GG  LTAS+ D    I PLA+AIVDSENDASWTWFF
Sbjct: 145 IVVVDGAALTCSYGGTMLTASTLDPGGHILPLAYAIVDSENDASWTWFF 193

BLAST of MELO3C032492.2 vs. TrEMBL
Match: tr|A0A1S4E0D5|A0A1S4E0D5_CUCME (uncharacterized protein LOC107991253 OS=Cucumis melo OX=3656 GN=LOC107991253 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.5e-26
Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 0

Query: 5   LHGDTVESYALILGFFDKLVESNPGTCIALEMDDSGHFKFCFMAFGASIEGWKYCRPIIS 64
           + G   +SY ++  F D L+ +NPGT  A E DD G FKF FMA   SI+ W YC P+IS
Sbjct: 199 IRGTPKDSYVMLSTFSDALIRNNPGTYTAKEADDEGRFKFYFMALATSIDAWNYCVPVIS 258

Query: 65  VDGTFLKCKFGGIPLTASSQDSNNQIFPLAFAIVDSENDASWTWFF 111
           VDG  +K K+ G  ++A + D N+QI PLAFA+VDSEND SW+WFF
Sbjct: 259 VDGATMKNKYLGTLISACTIDGNSQIMPLAFAVVDSENDLSWSWFF 304

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155934.15.0e-3162.96uncharacterized protein LOC111022933 [Momordica charantia][more]
XP_022895272.14.7e-2953.21uncharacterized protein LOC111409458 [Olea europaea var. sylvestris][more]
XP_022847669.14.0e-2855.05uncharacterized protein LOC111370215 [Olea europaea var. sylvestris][more]
XP_022871448.16.8e-2852.29protein FAR1-RELATED SEQUENCE 5-like [Olea europaea var. sylvestris][more]
XP_006847242.11.5e-2755.66protein FAR1-RELATED SEQUENCE 4, partial [Amborella trichopoda] >ERN08823.1 hypo... [more]
Match NameE-valueIdentityDescription
AT1G49920.11.3e-1236.84MuDR family transposase[more]
AT1G64260.12.9e-1233.91MuDR family transposase[more]
AT1G64255.17.0e-1134.51MuDR family transposase[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|U5D175|U5D175_AMBTC1.0e-2755.66Uncharacterized protein (Fragment) OS=Amborella trichopoda OX=13333 GN=AMTR_s046... [more]
tr|A0A1U7X8I4|A0A1U7X8I4_NICSY3.8e-2752.29protein FAR1-RELATED SEQUENCE 4-like OS=Nicotiana sylvestris OX=4096 GN=LOC10423... [more]
tr|A0A1S4E392|A0A1S4E392_CUCME5.0e-2754.72uncharacterized protein LOC107991824 OS=Cucumis melo OX=3656 GN=LOC107991824 PE=... [more]
tr|K4D1E1|K4D1E1_SOLLC4.2e-2651.38Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1[more]
tr|A0A1S4E0D5|A0A1S4E0D5_CUCME5.5e-2652.83uncharacterized protein LOC107991253 OS=Cucumis melo OX=3656 GN=LOC107991253 PE=... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018289MULE_transposase_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032492.2.1MELO3C032492.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018289MULE transposase domainPFAMPF10551MULEcoord: 62..110
e-value: 1.2E-11
score: 44.8
NoneNo IPR availablePANTHERPTHR31973FAMILY NOT NAMEDcoord: 5..110

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None