MELO3C032469.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAAGAAAAGGCCTCTTTTGAGTAACGGTAGACTATTTGACGTATGCCCGGTTGCACATACCATGAATCCAATTGCTAAAGACGTGACAGAAGCGATGCAAGAGGTTAACAAAAAGATTCAAGGGAGTTTTAAATATATCAGAAGTTCACATGTCACTCAAGGGAGGTTCAATGAGATGGCTCATCAAATTGGGATCACCAGTCAGACGATATTGGTCTGA ATGTCGAAGAAAAGGCCTCTTTTGAGTAACGGTAGACTATTTGACGTATGCCCGGTTGCACATACCATGAATCCAATTGCTAAAGACGTGACAGAAGCGATGCAAGAGGTTAACAAAAAGATTCAAGGGAGTTTTAAATATATCAGAAGTTCACATGTCACTCAAGGGAGGTTCAATGAGATGGCTCATCAAATTGGGATCACCAGTCAGACGATATTGGTCTGA ATGTCGAAGAAAAGGCCTCTTTTGAGTAACGGTAGACTATTTGACGTATGCCCGGTTGCACATACCATGAATCCAATTGCTAAAGACGTGACAGAAGCGATGCAAGAGGTTAACAAAAAGATTCAAGGGAGTTTTAAATATATCAGAAGTTCACATGTCACTCAAGGGAGGTTCAATGAGATGGCTCATCAAATTGGGATCACCAGTCAGACGATATTGGTCTGA MSKKRPLLSNGRLFDVCPVAHTMNPIAKDVTEAMQEVNKKIQGSFKYIRSSHVTQGRFNEMAHQIGITSQTILV
BLAST of MELO3C032469.2.1 vs. NCBI nr
Match: XP_022976722.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucurbita maxima] >XP_022976723.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucurbita maxima]) HSP 1 Score: 117.5 bits (293), Expect = 2.0e-23 Identity = 56/74 (75.68%), Postives = 65/74 (87.84%), Query Frame = 0
BLAST of MELO3C032469.2.1 vs. NCBI nr
Match: XP_023536471.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucurbita pepo subsp. pepo] >XP_023536472.1 zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 117.5 bits (293), Expect = 2.0e-23 Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 0
BLAST of MELO3C032469.2.1 vs. NCBI nr
Match: XP_022935970.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucurbita moschata]) HSP 1 Score: 117.1 bits (292), Expect = 2.6e-23 Identity = 56/74 (75.68%), Postives = 64/74 (86.49%), Query Frame = 0
BLAST of MELO3C032469.2.1 vs. NCBI nr
Match: KGN55034.1 (hypothetical protein Csa_4G624400 [Cucumis sativus]) HSP 1 Score: 116.7 bits (291), Expect = 3.4e-23 Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = 0
BLAST of MELO3C032469.2.1 vs. NCBI nr
Match: XP_011654029.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucumis sativus] >XP_011654030.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 1-like [Cucumis sativus]) HSP 1 Score: 116.7 bits (291), Expect = 3.4e-23 Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = 0
BLAST of MELO3C032469.2.1 vs. Swiss-Prot
Match: sp|Q75HY5|RSLE3_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 1.4e-04 Identity = 26/72 (36.11%), Postives = 43/72 (59.72%), Query Frame = 0
BLAST of MELO3C032469.2.1 vs. Swiss-Prot
Match: sp|B9FJG3|RSLE1_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 4.1e-04 Identity = 26/73 (35.62%), Postives = 42/73 (57.53%), Query Frame = 0
BLAST of MELO3C032469.2.1 vs. Swiss-Prot
Match: sp|Q6AVI0|RSLE2_ORYSJ (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 4.1e-04 Identity = 26/73 (35.62%), Postives = 42/73 (57.53%), Query Frame = 0
BLAST of MELO3C032469.2.1 vs. TrEMBL
Match: tr|A0A1S4E4C0|A0A1S4E4C0_CUCME (zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Cucumis melo OX=3656 GN=LOC107992032 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.2e-23 Identity = 58/72 (80.56%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of MELO3C032469.2.1 vs. TrEMBL
Match: tr|A0A0A0L1Z7|A0A0A0L1Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G624400 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 2.2e-23 Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = 0
BLAST of MELO3C032469.2.1 vs. TrEMBL
Match: tr|A0A2I4E182|A0A2I4E182_9ROSI (zinc finger BED domain-containing protein RICESLEEPER 1-like OS=Juglans regia OX=51240 GN=LOC108985342 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 5.9e-16 Identity = 44/74 (59.46%), Postives = 58/74 (78.38%), Query Frame = 0
BLAST of MELO3C032469.2.1 vs. TrEMBL
Match: tr|A0A067KRK2|A0A067KRK2_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11935 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 7.6e-16 Identity = 43/74 (58.11%), Postives = 60/74 (81.08%), Query Frame = 0
BLAST of MELO3C032469.2.1 vs. TrEMBL
Match: tr|A0A2C9W709|A0A2C9W709_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G079200 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 6.5e-15 Identity = 41/74 (55.41%), Postives = 57/74 (77.03%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
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