MELO3C031620.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C031620.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Locationchr06 : 5168703 .. 5169255 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATCGAACAACGCAAGACTTCGTGATGTAGCAGATGATCCACAACAAGTCCTTGATATATGTCATAATAATGAGAGGTACATGGAGGAGATACATAATGTACAATCTACCTATTGTACCTCCACGAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAATGTGGAAGAAGTGTCTCCTACGACACAAACACAGAGCCAAACTGGTTATGGTAGTCCGATGATGATGATGCCAACATTTAGAGCAGAATATTGTGATTCTGAGGTTGGTACAAGATATTATGATGCAGGGGTCAGTCCATCGTCTTCATACATGGATGTCGGTCCATCTAATTCTTACATGCATGGACATGGACGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACTAAGAGGACCGAGAACAACATAGAGTTCAGAGTCGACGTCGACAACCAACTAGAAATCGACGACATCCGAGTTGTGGAACACATTGA

mRNA sequence

AGATCGAACAACGCAAGACTTCGTGATGTAGCAGATGATCCACAACAAGTCCTTGATATATGTCATAATAATGAGAGGTACATGGAGGAGATACATAATGTACAATCTACCTATTGTACCTCCACGAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAATGTGGAAGAAGTGTCTCCTACGACACAAACACAGAGCCAAACTGGTTATGGGGTCAGTCCATCGTCTTCATACATGGATGTCGGTCCATCTAATTCTTACATGCATGGACATGGACGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACTAAGAGGACCGAGAACAACATAGAGTTCAGAGTCGACGTCGACAACCAACTAGAAATCGACGACATCCGAGTTGTGGAACACATTGA

Coding sequence (CDS)

ATGATCCACAACAAGTCCTTGATATATGTCATAATAATGAGAGGTACATGGAGGAGATACATAATGTACAATCTACCTATTGTACCTCCACGAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAATGTGGAAGAAGTGTCTCCTACGACACAAACACAGAGCCAAACTGGTTATGGGGTCAGTCCATCGTCTTCATACATGGATGTCGGTCCATCTAATTCTTACATGCATGGACATGGACGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACTAA

Protein sequence

MIHNKSLIYVIIMRGTWRRYIMYNLPIVPPRVHRGRVRVEEAELDEVYHNVEEVSPTTQTQSQTGYGVSPSSSYMDVGPSNSYMHGHGRGYGEHNEYLYHEAPADVSDRQEYQQEPEN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C031620.2.1MELO3C031620.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..79

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C031620.2Watermelon (97103) v2medwmbB423
MELO3C031620.2Watermelon (97103) v2medwmbB442
MELO3C031620.2Wax gourdmedwgoB517
MELO3C031620.2Wax gourdmedwgoB530
MELO3C031620.2Cucumber (Gy14) v2cgybmedB201
MELO3C031620.2Cucumber (Gy14) v2cgybmedB432
MELO3C031620.2Cucumber (Gy14) v1cgymedB432
MELO3C031620.2Cucurbita maxima (Rimu)cmamedB001
MELO3C031620.2Cucurbita maxima (Rimu)cmamedB273
MELO3C031620.2Cucurbita maxima (Rimu)cmamedB398
MELO3C031620.2Cucurbita maxima (Rimu)cmamedB863
MELO3C031620.2Cucurbita maxima (Rimu)cmamedB950
MELO3C031620.2Cucurbita moschata (Rifu)cmomedB260
MELO3C031620.2Cucurbita moschata (Rifu)cmomedB385
MELO3C031620.2Cucurbita moschata (Rifu)cmomedB857
MELO3C031620.2Cucurbita moschata (Rifu)cmomedB940
MELO3C031620.2Cucurbita pepo (Zucchini)cpemedB170
MELO3C031620.2Cucurbita pepo (Zucchini)cpemedB368
MELO3C031620.2Cucurbita pepo (Zucchini)cpemedB693
MELO3C031620.2Cucurbita pepo (Zucchini)cpemedB951
MELO3C031620.2Wild cucumber (PI 183967)cpimedB224
MELO3C031620.2Wild cucumber (PI 183967)cpimedB486
MELO3C031620.2Cucumber (Chinese Long) v2cumedB223
MELO3C031620.2Cucumber (Chinese Long) v2cumedB477
MELO3C031620.2Melon (DHL92) v3.6.1medmedB049
MELO3C031620.2Bottle gourd (USVL1VR-Ls)lsimedB032
MELO3C031620.2Bottle gourd (USVL1VR-Ls)lsimedB385
MELO3C031620.2Watermelon (Charleston Gray)medwcgB416
MELO3C031620.2Watermelon (Charleston Gray)medwcgB437
MELO3C031620.2Watermelon (97103) v1medwmB447
MELO3C031620.2Watermelon (97103) v1medwmB474
MELO3C031620.2Silver-seed gourdcarmedB0075
MELO3C031620.2Silver-seed gourdcarmedB0292
MELO3C031620.2Silver-seed gourdcarmedB0714
MELO3C031620.2Silver-seed gourdcarmedB0940
MELO3C031620.2Cucumber (Chinese Long) v3cucmedB230
MELO3C031620.2Cucumber (Chinese Long) v3cucmedB497