MELO3C031617.2.1 (mRNA) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C031617.2.1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	exopolygalacturonase-like
Location	chr06 : 5053936 .. 5056920 (+)
Sequence length	1094

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCCTTCGTACCCGACGGAGCCCCCCGTCGGAGATCCTTGGAGTGGATTGCGTGTTTTTGATGTAAGTGATTATGGGGCAGTTGCTGATGGGAAGACAAACGACACCTTGGTAATTCCATTTCCTCTCGGCTCTTTCTTCTTCTTCTTCCTTATTCTTTTTTTATTTTTTATTTTTATTTTTAATTACGTGATTAATTTATGAACAATTTACATTTACCTTTTTGGAAAATACTATTGGAAATATTATAATTTATCTAAGATGGGTGTGATTGTAATTTTTTTTTTTTTTTTTGAGAAATTTTTTTATTTAAAATAATATTCATTTAGAAATTAGGAAATATTAGCATTTAAACCCTAATTAAGAGTGGAGAACTTACAATCTTTAAATTAATTGAACCAATATTTATATACTAAAATAAGTTTGACTTTAGAAGTAACATAGAAAATTAATTGTAGGATTGAGGAATAAATTGTACCAAACTAATTAATGGATAAGTCAAAAGTGTCTCAAAAAAACTTGAAATCAAACAAGAAGTTAAAAAGAGAAAGTCTTTGCCCATCAATAAAATAGTCAAACCTAGTTAATAACTATTGGGTAAATGACTAGAAAATTCAGTACTTAAAAGTTGGAATTTAACTAAGAATTAAACCATTGATTGTTAAGAAAAAATAAATAATTATAAGAAATGGAGAGAATTAATTGTAAAAACTAAAAACAAAAATGAAAGGGTTAACAAAAGGAACTACAAAAACGGCAAACAAAGACTATTATATTAATGTAGTTACTTGAGGCCGAAGTTATGTTTATAAATAGATGTACTTAAAGGGAAAAAGAGAGTTAGAAATAAAGCCAATCAACTTGTGATTGAAATATGAATTGAGAATTAATTTTGATTGAATCATACAAGTTATATACAAAAACTAATAATGAAACTATTGAAAGTTTATTATaGGCATTGATGGCGGCGTGGGAAGATGCATGTTATAACGAAGGAGAGTCCATGCTGTTAATACCGGAAGGGAATTACTTGGTTGACCAAATTACACTTTCAGGGCCATGTTTCAGTGACCTCTCTCCCAAAGTCCTCATTTTGGGCACTTTGATTGCCCCCACCAACCTCACCGCCGACGTTTGGATCCACTTCCATTCCCTTCCCCGCCTCTCCCTCACTGCCGGCCACTTATCCACCATCGACGGCCAGGGCGCCCAAACCTGGTCCTCCGGTTCTGCCTGTCGTCGTGCACTGACTTGTCCTATGTTTGCCACCGTAAGTGTGTGTATATATATATATTATATTTGACGAAACTTTAAAAGTCTCTTTTAGTTTAGATATTAAATAGATACAAACTTAAAATTCGGAAGTAGTGAAGTTATAATTTATCTGGAATATCAATCATTTTTTGCGTGTGCGGTGCAGTCTTTGAAGCTAAGCAATGTGTTGAACGGGACAGTGAGTAATATAAACCTAGTGGATAGCAAGGGTTTTCATGTGTCCATTTTTCAGTGTGACAATATTCATTTTTCTGGATTCAATATTACAGCTCCTTGGAATAGTCAAAACACTGATGGCATCCATATCAGCCAATCTACCAATATCAACGTTACAAACTCCAACATCGGTGTTGGTGATGATTGTGTTTCCATTGGACCTGGTAGTGTGAACGTGTCAGTTTCTAATGTTACATGTGGTCCAGGACATGGAATCAGGTATTATATCTAAATTAGAATATCGACCTATATATTGGAAGAGTAGAAGTTTTTAGAATTATTGAAATTTGAAAGTATATATATATATATATTCATGTAATGCAGTATCGGGAGTTTAGGGAAGTACAAAATGGAGAAAGATGTGATAGGAATAAGGGTGGAGAATTGTACCATAAATGGAACTCAAAATGGAGTGAGGGTGAAAACATGGCCAGGAGATCTTGGCAGCAATGCTACCAATTTGACATTTCAAAACATTGTGATGATCAATGTCTCAAATCCCATTATCATAGATCAACAATATTGTCCTAATCATTCTTGTGACACACGAGAGGTAGATAGTTATATGATTTGTATTTATCTCACTACTTTTAAGTACTTCTTATACATATACTCCCAATTAAAGTATGGATTTACTCATGTGCTAAGCTCTTATTATTATTATTATTATTATTATTGAACTTTTATAATATTTTTAAAAGCTATTCCAAGTTGTTTTCTAAAAATAATTTTATCTCTTTTTAATTTGATTAAAAATTCAAATTTATTTTTAGAATAGGTGAAAACTATGATAAATAAATGGGAAGAATACAGACATAAATTTGGTATTTGGTATTGTTAACAAATAAAACCTTAATTTCTAAAATGTTCCTTTGGATAACTTTTCCTAAATGAGCATGTTTAAAGTATCCATTGCAACAACTTATAATCAATTATAGTAACAAATCATTTAAAAATTACAATGATAAGAATGAAATGGAAGTTAAAAATGTTTAAAATTGTGAATTCCTAAAATCCACCTGATAAAAAATTAAAAAATTATTGTAGAAAAAGAATTAAAGAATTTGACAACCGTCAAAATAACTTTCGAAACACTTTAAACAATTTGATTGAAAGAGTTTAAAAAATTAATGACATTTTTTGAAAAACATTTCTAAAAACATTATCAAGAATGTTTTTTTCTTCAAAACTGCTCCGTAAATAATGCTTAGAAAGAAAGATAGATGATTAATGGGTGTTGTTTATTATTTGATGAACAGCCATCAAGTGTGAAGCTGAGTGATATCAACCTAAGAAATATAAGTGGAACTTACAACTCTCAGTTTGCAATTAATCTGAAATGCAGCTCAACGAAGCCATGTGAGAACATTCATCTTTCTTACATTAATCTCACTTCCATTAGTCACCAATCAGATGATGATGAAGATGAAGAAGAAGATGATGATATTGGCAACTTCAATTTCAAGGGTGCTCTAAATTCTTTCACCATTTTTAA

mRNA sequence

CGCCTTCGTACCCGACGGAGCCCCCCGTCGGAGATCCTTGGAGTGGATTGCGTGTTTTTGATGTAAGTGATTATGGGGCAGTTGCTGATGGGAAGACAAACGACACCTTGGCATTGATGGCGGCGTGGGAAGATGCATGTTATAACGAAGGAGAGTCCATGCTGTTAATACCGGAAGGGAATTACTTGGTTGACCAAATTACACTTTCAGGGCCATGTTTCAGTGACCTCTCTCCCAAAGTCCTCATTTTGGGCACTTTGATTGCCCCCACCAACCTCACCGCCGACGTTTGGATCCACTTCCATTCCCTTCCCCGCCTCTCCCTCACTGCCGGCCACTTATCCACCATCGACGGCCAGGGCGCCCAAACCTGGTCCTCCGGTTCTGCCTGTCGTCGTGCACTGACTTGTCCTATGTTTGCCACCTCTTTGAAGCTAAGCAATGTGTTGAACGGGACAGTGAGTAATATAAACCTAGTGGATAGCAAGGGTTTTCATGTGTCCATTTTTCAGTGTGACAATATTCATTTTTCTGGATTCAATATTACAGCTCCTTGGAATAGTCAAAACACTGATGGCATCCATATCAGCCAATCTACCAATATCAACGTTACAAACTCCAACATCGGTGTTGGTGATGATTGTGTTTCCATTGGACCTGGTAGTGTGAACGTGTCAGTTTCTAATGTTACATGTGGTCCAGGACATGGAATCAGTATCGGGAGTTTAGGGAAGTACAAAATGGAGAAAGATGTGATAGGAATAAGGGTGGAGAATTGTACCATAAATGGAACTCAAAATGGAGTGAGGGTGAAAACATGGCCAGGAGATCTTGGCAGCAATGCTACCAATTTGACATTTCAAAACATTGTGATGATCAATGTCTCAAATCCCATTATCATAGATCAACAATATTGTCCTAATCATTCTTGTGACACACGAGAGCTCAACGAAGCCATGTGAGAACATTCATCTTTCTTACATTAATCTCACTTCCATTAGTCACCAATCAGATGATGATGAAGATGAAGAAGAAGATGATGATATTGGCAACTTCAATTTCAAGGGTGCTCTAAATTCTTTCACCATTTTTAA

Coding sequence (CDS)

CCTTCGTACCCGACGGAGCCCCCCGTCGGAGATCCTTGGAGTGGATTGCGTGTTTTTGATGTAAGTGATTATGGGGCAGTTGCTGATGGGAAGACAAACGACACCTTGGCATTGATGGCGGCGTGGGAAGATGCATGTTATAACGAAGGAGAGTCCATGCTGTTAATACCGGAAGGGAATTACTTGGTTGACCAAATTACACTTTCAGGGCCATGTTTCAGTGACCTCTCTCCCAAAGTCCTCATTTTGGGCACTTTGATTGCCCCCACCAACCTCACCGCCGACGTTTGGATCCACTTCCATTCCCTTCCCCGCCTCTCCCTCACTGCCGGCCACTTATCCACCATCGACGGCCAGGGCGCCCAAACCTGGTCCTCCGGTTCTGCCTGTCGTCGTGCACTGACTTGTCCTATGTTTGCCACCTCTTTGAAGCTAAGCAATGTGTTGAACGGGACAGTGAGTAATATAAACCTAGTGGATAGCAAGGGTTTTCATGTGTCCATTTTTCAGTGTGACAATATTCATTTTTCTGGATTCAATATTACAGCTCCTTGGAATAGTCAAAACACTGATGGCATCCATATCAGCCAATCTACCAATATCAACGTTACAAACTCCAACATCGGTGTTGGTGATGATTGTGTTTCCATTGGACCTGGTAGTGTGAACGTGTCAGTTTCTAATGTTACATGTGGTCCAGGACATGGAATCAGTATCGGGAGTTTAGGGAAGTACAAAATGGAGAAAGATGTGATAGGAATAAGGGTGGAGAATTGTACCATAAATGGAACTCAAAATGGAGTGAGGGTGAAAACATGGCCAGGAGATCTTGGCAGCAATGCTACCAATTTGACATTTCAAAACATTGTGATGATCAATGTCTCAAATCCCATTATCATAGATCAACAATATTGTCCTAATCATTCTTGTGACACACGAGAGCTCAACGAAGCCATGTGA

Protein sequence

PSYPTEPPVGDPWSGLRVFDVSDYGAVADGKTNDTLALMAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSIGPGSVNVSVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRELNEAM

Homology

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BLAST of MELO3C031617.2.1 vs. NCBI nr
Match: XP_016898978.1 (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 566.2 bits (1458), Expect = 6.9e-158
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 39  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWI 98
           MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWI
Sbjct: 1   MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWI 60

Query: 99  HFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNINL 158
           HFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNINL
Sbjct: 61  HFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNINL 120

Query: 159 VDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSIG 218
           VDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSIG
Sbjct: 121 VDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSIG 180

Query: 219 PXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLG 278
           PXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLG
Sbjct: 181 PXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLG 240

Query: 279 SNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRELNEAM 320
           SNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRELNEAM
Sbjct: 241 SNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRELNEAM 281

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BLAST of MELO3C031617.2.1 vs. NCBI nr
Match: XP_004134495.1 (PREDICTED: exopolygalacturonase-like [Cucumis sativus] >KGN57137.1 hypothetical protein Csa_3G164560 [Cucumis sativus])

HSP 1 Score: 558.9 bits (1439), Expect = 1.1e-155
Identity = 269/314 (85.67%), Postives = 285/314 (90.76%), Query Frame = 0


Query: 1   PSYPTEPPVGDPWSGLRVFDVSDYGAVADGKTNDTLALMAAWEDACYNEGESMLLIPEGN 60
           PSYP EPPVGDPWSGLRVFDV+DYG VADGKTN++LALMAAWEDACY++G SMLLIPEGN
Sbjct: 30  PSYPAEPPVGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGN 89

Query: 61  YLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQG 120
           Y VDQ+T SGPCF+DLSPKVLILGTLIAPTNLTADVWIHF SL RLSLTAGHLST+DG+G
Sbjct: 90  YFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSLTAGHLSTLDGRG 149

Query: 121 AQTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFN 180
           AQTWSSGS CR A+TC MFA SLKLSNVLNGTVS+INLVDSK FHVSI QCDNIH SGFN
Sbjct: 150 AQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFN 209

Query: 181 ITAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSIGPXXXXXXVSNVTCGPGHGISIG 240
           ITAPW SQNTDG HISQSTNI++TNS IGVGDDCVSIGP      VSNVTCGPGHGISIG
Sbjct: 210 ITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHGISIG 269

Query: 241 SLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIII 300
           SLG+YKME DV GI VENCTI+GTQNGVRVKTWPGD  SNATNLTFQNIVMINVSNPIII
Sbjct: 270 SLGRYKMENDVRGIWVENCTISGTQNGVRVKTWPGDHASNATNLTFQNIVMINVSNPIII 329

Query: 301 DQQYCPNHSCDTRE 315
           DQQYCPN SCD+RE
Sbjct: 330 DQQYCPNSSCDSRE 343

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BLAST of MELO3C031617.2.1 vs. NCBI nr
Match: XP_023539060.1 (exopolygalacturonase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 464.5 bits (1194), Expect = 2.8e-127
Identity = 228/316 (72.15%), Postives = 255/316 (80.70%), Query Frame = 0


Query: 1   PSYPTEPPVGDPWSGLRVFDVSDYGAVADGKTNDTLALMAAWEDACYNEGESMLLIPEGN 60
           P    EPPVGDPW GL VFDV+DYGA+ADGKT ++LA M AWEDAC   G S LLIPEG+
Sbjct: 41  PPDMAEPPVGDPWRGLAVFDVTDYGAIADGKTENSLAFMGAWEDACAYRGSSTLLIPEGS 100

Query: 61  YLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTI-DGQ 120
           + + Q+  SGPCF DLSPKV+ILGTLIAPT LTADVWI+F SL  L++T    S I DGQ
Sbjct: 101 FFLAQVLFSGPCFGDLSPKVIILGTLIAPTTLTADVWIYFKSLRHLTITGNVGSGILDGQ 160

Query: 121 GAQTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGF 180
           GA+TW  G  CR  L+C +F TSLKLS+V N TVSNI+LV+SKGFHV++  CDNIH SGF
Sbjct: 161 GAETWLYGFNCRHRLSCGIFTTSLKLSDVSNATVSNISLVNSKGFHVALNGCDNIHLSGF 220

Query: 181 NITAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSIGPXXXXXXVSNVTCGPGHGISI 240
           NITAPWNSQNTDGIHISQSTNIN+T S+I VGDDCVSIGP      VSNV CGPGHGIS+
Sbjct: 221 NITAPWNSQNTDGIHISQSTNINITTSDISVGDDCVSIGPGSINVSVSNVRCGPGHGISV 280

Query: 241 GSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWP-GDLGSNATNLTFQNIVMINVSNPI 300
           GSLG+Y+ EKDV+GIRVENCTI  TQNGVRVKTWP GD  S ATNLTFQNIVM NVSNPI
Sbjct: 281 GSLGRYREEKDVMGIRVENCTIKDTQNGVRVKTWPGGDHASKATNLTFQNIVMFNVSNPI 340

Query: 301 IIDQQYCPNHSCDTRE 315
           IIDQQYCPNH CD +E
Sbjct: 341 IIDQQYCPNHFCDIKE 356

[Close]

BLAST of MELO3C031617.2.1 vs. NCBI nr
Match: XP_022979570.1 (exopolygalacturonase-like [Cucurbita maxima])

HSP 1 Score: 419.9 bits (1078), Expect = 8.0e-114
Identity = 202/279 (72.40%), Postives = 230/279 (82.44%), Query Frame = 0


Query: 39  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWI 98
           M+AWE+AC  +G+S+ LIPEG +LV  +T SGPCF++LSPKVLI  TLIAPT LT DVWI
Sbjct: 1   MSAWEEACAFKGDSIFLIPEGTFLVAGVTFSGPCFNNLSPKVLIFATLIAPTKLTTDVWI 60

Query: 99  HFHSLPRLSLTAGHLSTI-DGQGAQTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNIN 158
           HFHSL  L LT    ST+ +GQGAQTWS GSACR  +TCP+F TSLKL+ V +  V NI+
Sbjct: 61  HFHSLRHLLLTGFDGSTVLNGQGAQTWSFGSACRHRMTCPIFTTSLKLTGVSHAIVKNIS 120

Query: 159 LVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSI 218
           LVDSKGFHV++  CD+IH  GFNITAPWNSQNTDGIHIS STNINV NS+IGVGDDCVSI
Sbjct: 121 LVDSKGFHVAMHGCDHIHLYGFNITAPWNSQNTDGIHISNSTNINVANSHIGVGDDCVSI 180

Query: 219 GPXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDL 278
           GP      VSN+ CGPGHGIS+GSLG+YK E DVIGIRVENCTI+ TQNGVRVKTWPG+ 
Sbjct: 181 GPGSFDVLVSNIRCGPGHGISVGSLGRYKNEMDVIGIRVENCTISDTQNGVRVKTWPGNY 240

Query: 279 GSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRELN 317
            SNA +LTFQNIVM NVSNPIIIDQ YCPNHSCDT+E+N
Sbjct: 241 SSNAAHLTFQNIVMNNVSNPIIIDQHYCPNHSCDTKEVN 279

[Close]

BLAST of MELO3C031617.2.1 vs. NCBI nr
Match: XP_022956245.1 (exopolygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 414.5 bits (1064), Expect = 3.4e-112
Identity = 199/277 (71.84%), Postives = 229/277 (82.67%), Query Frame = 0


Query: 39  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWI 98
           MAAWE+AC  +G+S+ LIPEG +LV  +T SGPCF++LSPKVLI  TLIAPT LT DVWI
Sbjct: 1   MAAWEEACAFKGDSIFLIPEGTFLVAGVTFSGPCFNNLSPKVLIFATLIAPTKLTTDVWI 60

Query: 99  HFHSLPRLSLTA-GHLSTIDGQGAQTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNIN 158
           HFHSL  L LT     + ++GQGAQTWS GSACRR +TCP+F TSLKL++V +  V +I+
Sbjct: 61  HFHSLRHLLLTGLDGSAVLNGQGAQTWSFGSACRRRMTCPIFTTSLKLTDVSHAIVKDIS 120

Query: 159 LVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSI 218
           LVDSKGFHV++  CD+IH  GFNITAPWNSQNTDGIHIS STNINV NS+IGVGDDCVSI
Sbjct: 121 LVDSKGFHVAMHGCDHIHLYGFNITAPWNSQNTDGIHISNSTNINVANSHIGVGDDCVSI 180

Query: 219 GPXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDL 278
           GP      VSN+ CGPGHGIS+GSLG+YK E DVIGIRVENCTI+ TQNGVRVKTWPG+ 
Sbjct: 181 GPGSFDVLVSNIRCGPGHGISVGSLGRYKNEMDVIGIRVENCTISDTQNGVRVKTWPGNY 240

Query: 279 GSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRE 315
            SNA +LTFQNIVM NVSNPIIIDQ+YCPNHSCD +E
Sbjct: 241 SSNAAHLTFQNIVMNNVSNPIIIDQRYCPNHSCDMKE 277

[Close]

BLAST of MELO3C031617.2.1 vs. TAIR10
Match: AT4G18180.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 244.2 bits (622), Expect = 1.1e-64
Identity = 130/299 (43.48%), Postives = 182/299 (60.87%), Query Frame = 0


Query: 14  SGLRVFDVSDYGAVADGKTNDTLALMAAWEDACYNEGESM-LLIPEGNYLVDQITLSGPC 73
           S + + DV  +GA A+   + T A +AAW+ AC +   S+ L+IP G + V  +  SGPC
Sbjct: 30  SSVFLVDVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLIIPRGEFSVGSLRFSGPC 89

Query: 74  FSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRR 133
            +  +  V +  +       +   WI F  +  L+LT G   T DGQGA  W   + C  
Sbjct: 90  TNVSNLTVRVKASTDLSKYRSGGGWIQFGWINGLTLTGG--GTFDGQGALAWPFNN-CTS 149

Query: 134 ALTCPMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDG 193
              C +  TSLK   +    V  I+ V+SK FH+++ +C +   +  NITAP +S NTDG
Sbjct: 150 DSNCKLLPTSLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDG 209

Query: 194 IHISQSTNINVTNSNIGVGDDCVSIGPXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVI 253
           IHI +S+N+  + S+I  GDDCVSIG       ++++ CGPGHGIS+GSLG+Y  EKDV 
Sbjct: 210 IHIERSSNVYFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVN 269

Query: 254 GIRVENCTINGTQNGVRVKTWPGDLG-SNATNLTFQNIVMINVSNPIIIDQQYCPNHSC 311
           G+ V++C I+GT NG+R+KTW    G S ATN+TF+NI+M NV+NPIIIDQ YCP  SC
Sbjct: 270 GLVVKDCKISGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSC 325

[Close]

BLAST of MELO3C031617.2.1 vs. TAIR10
Match: AT2G33160.1 (glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein)

HSP 1 Score: 242.3 bits (617), Expect = 4.1e-64
Identity = 126/315 (40.00%), Postives = 192/315 (60.95%), Query Frame = 0


Query: 3   YPTEPPVGDPWSGLRVFDVSDYGAVADGKTNDTLALMAAWEDAC-YNEGESMLLIPEGNY 62
           YP +P         ++FDV +YGA AD + ++  A   AW +AC ++ G S + IP G +
Sbjct: 25  YPGQP---------KIFDVRNYGARADSQRDNAFAFTKAWNEACQWSYGRSTVYIPSGIF 84

Query: 63  LVDQITLSGPCFSDLSPKVLILGTLIAPTN---LTADVWIHFHSLPRLSLTAGHLSTIDG 122
            + Q+T SGPC S ++    I GTL+AP N   +  + WI F  +  L++T G L  +DG
Sbjct: 85  YLRQVTFSGPCKSSIT--FFIRGTLLAPRNPYAINQEEWILFKYVDNLTVTGGGL--LDG 144

Query: 123 QGAQTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSG 182
           QG+ +W     C +   C   A ++  + V +  ++ +  ++SK  H ++F  ++ + +G
Sbjct: 145 QGSYSWPLND-CNKNTNCRTLAMNIGFAFVKSSKINGLRSINSKMGHFNLFSVEDFNITG 204

Query: 183 FNITAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSIGPXXXXXXVSNVTCGPGHGIS 242
             ITAP +S NTDGI I +S+++ + N  IG GDDC++I        +S+V CGPGHGIS
Sbjct: 205 VTITAPGDSPNTDGIKIGKSSHMQIYNVTIGTGDDCIAILDGTSNLDISDVRCGPGHGIS 264

Query: 243 IGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGS-NATNLTFQNIVMINVSNP 302
           +GSLG+YK EK+V G+ V N  INGT +G+R+KTW   +   + +N  ++NI MINV NP
Sbjct: 265 VGSLGRYKEEKNVQGLTVRNSIINGTTDGLRIKTWAKSVSQISVSNFLYENIQMINVGNP 324

Query: 303 IIIDQQYCPNHSCDT 313
           I+IDQQYCP+  CD+
Sbjct: 325 IVIDQQYCPHGQCDS 325

[Close]

BLAST of MELO3C031617.2.1 vs. TAIR10
Match: AT1G02790.1 (polygalacturonase 4)

HSP 1 Score: 236.9 bits (603), Expect = 1.7e-62
Identity = 119/288 (41.32%), Postives = 174/288 (60.42%), Query Frame = 0


Query: 18  VFDVSDYGAVADGKTNDTLALMAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLS 77
           V+D++ +GAV DG TN   A +  W   C +   + LL+P+G +L   +  +GPC S ++
Sbjct: 51  VYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPVPATLLVPKGTFLAGPVIFAGPCKSKVT 110

Query: 78  PKVLILGTLIAPTN-LTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTC 137
             V ++GT+IA T+      W  F  +  L LT     T  G+G   W +   C + + C
Sbjct: 111 --VNVIGTIIATTSGYATPEWFLFERVDNLVLTG--TGTFHGKGEAVWKA-DGCGKKVQC 170

Query: 138 PMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHIS 197
            +  TSLK  N+ N  ++ I+ V++K FH+ + + +N++     +TAP  S NTDGIH+S
Sbjct: 171 NLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLS 230

Query: 198 QSTNINVTNSNIGVGDDCVSIGPXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVIGIRV 257
            + N+++ +S I  GDDCVS+G       V  V CGPGHG+S+GSLGKYK E+DV GI V
Sbjct: 231 NADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHV 290

Query: 258 ENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQY 305
            NCT+  T NG+R+KTW G   S A ++ F+NI+M +V NPIIIDQ Y
Sbjct: 291 NNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNY 333

[Close]

BLAST of MELO3C031617.2.1 vs. TAIR10
Match: AT2G41850.1 (polygalacturonase abscission zone A. thaliana)

HSP 1 Score: 235.0 bits (598), Expect = 6.6e-62
Identity = 129/299 (43.14%), Postives = 176/299 (58.86%), Query Frame = 0


Query: 21  VSDYGAVADGKTNDTLALMAAWEDACYNEGESMLLIPEGN-YLVDQITLSGPCFSDLSPK 80
           VSD+GA  DGKT+DT A + AW+ AC + G   LL+P+GN YL+  I L+GPC S L+  
Sbjct: 70  VSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVNLLVPKGNTYLLKSIQLTGPCNSILT-- 129

Query: 81  VLILGTLIAPTNLT----ADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALT 140
           V I GTL A    +       WI F  +  LS+  G    +DG G   W +     +A  
Sbjct: 130 VQIFGTLSASQKRSDYKDISKWIMFDGVNNLSVDGGDTGVVDGNGETWWQNSCKRNKAKP 189

Query: 141 CPMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHI 200
           C    T+L   N  +  V N+ + +++   +SI +C N+  S   +TAP +S NTDGIHI
Sbjct: 190 CTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHI 249

Query: 201 SQSTNINVTNSNIGVGDDCVSIGPXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVIGIR 260
           + + NI V+ S IG GDDC+SI        ++++TCGPGHGISIGSLG    +  V G+ 
Sbjct: 250 TNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGDDNSKAFVSGVT 309

Query: 261 VENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRE 315
           V+   ++GT NGVR+KT+ G  G+ A+N+ FQNI M NV NPIIIDQ YC    C T +
Sbjct: 310 VDGAKLSGTDNGVRIKTYQGGSGT-ASNIIFQNIQMDNVKNPIIIDQDYCDKSKCTTEK 365

[Close]

BLAST of MELO3C031617.2.1 vs. TAIR10
Match: AT1G17150.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 231.9 bits (590), Expect = 5.6e-61
Identity = 127/310 (40.97%), Postives = 181/310 (58.39%), Query Frame = 0


Query: 5   TEPPVGDPWSGLRVFDVSDYGAVADGKTNDTLALMAAWEDACYNEGESMLLIPEGNYLVD 64
           T  P+  P    +VFDV  YGA  DGK ++T A   AW+DAC   G S + IP G + + 
Sbjct: 23  TSRPITRP----KVFDVRSYGAKGDGKMDNTNAFTNAWKDACRWNGPSKMYIPLGTFYLG 82

Query: 65  QITLSGPCFSDLSPKVLILGTLIAPTN---LTADVWIHFHSLPRLSLTAGHLSTIDGQGA 124
            +T  GPC   +S   +I GTL+AP N   +  ++WI+F  +  L++      T+DGQG 
Sbjct: 83  GVTFVGPCDGKIS--FVIDGTLLAPPNNDDIKKEIWINFRYINYLTVFGD--GTLDGQGK 142

Query: 125 QTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNI 184
           ++WS    C++   CP  A ++    V N +++ I  ++SK  H +    D+   +  NI
Sbjct: 143 KSWSL-IDCQKDNNCPKLAINMGFDFVKNSSMNGITSLNSKAGHFNFLSVDHFSITRVNI 202

Query: 185 TAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSIGPXXXXXXVSNVTCGPGHGISIGS 244
            AP NS NTDGI I+ S+N+ ++N++I  GDDC+++        + NV CGPGHGISIGS
Sbjct: 203 IAPSNSPNTDGIKIALSSNMQISNTHISTGDDCIAMLSGNTNFDIYNVKCGPGHGISIGS 262

Query: 245 LGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGS-NATNLTFQNIVMINVSNPIII 304
           LGK K EK+V G+ V N    GT NG+R+KTW     +    NL ++N+ MINV NPI I
Sbjct: 263 LGKNKDEKNVNGLMVRNSVFTGTTNGIRIKTWESSASTIRIINLVYENLQMINVENPIGI 322

Query: 305 DQQYCPNHSC 311
           DQ+YCP   C
Sbjct: 323 DQKYCPYPPC 323

[Close]

BLAST of MELO3C031617.2.1 vs. Swiss-Prot
Match: sp|Q6H9K0|PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.6e-65
Identity = 124/295 (42.03%), Postives = 180/295 (61.02%), Query Frame = 0


Query: 18  VFDVSDYGAVADGKTNDTLALMAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLS 77
           VF+V+DYGA   G  +   A+M AW+ AC ++G S +LIP+GNY + ++ + GPC     
Sbjct: 9   VFNVNDYGAKGAGDISQ--AVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKGSKI 68

Query: 78  PKVL--ILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALT 137
              +  ++     P+   +D W+ F+ +    LT     T+DGQG   W+  + C +   
Sbjct: 69  GFQIDGVVKAPADPSKFKSDGWVSFYRID--GLTVSGTGTLDGQGQTAWAKNN-CDKNPN 128

Query: 138 CPMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHI 197
           C   A +L+   + +  V +I  ++SK FH+++ +C++I F    +TAP  S NTDGIH+
Sbjct: 129 CKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHV 188

Query: 198 SQSTNINVTNSNIGVGDDCVSIGPXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVIGIR 257
             S  + +TN+ I  GDDC+SIGP      ++ V CGPGHGISIGSLG+Y  EK+V GI 
Sbjct: 189 GISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGIT 248

Query: 258 VENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSC 311
           V+ CT +GT NGVRVKTWP      AT+LTFQ++ M NV NP+I+DQ+YCP   C
Sbjct: 249 VKGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQC 298

[Close]

BLAST of MELO3C031617.2.1 vs. Swiss-Prot
Match: sp|Q05967|PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.6e-65
Identity = 121/297 (40.74%), Postives = 191/297 (64.31%), Query Frame = 0


Query: 18  VFDVSDYGAVADGKTNDTLALMAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLS 77
           VFD++ YGA ++   ++  AL+ A+++AC +   S ++IP+G + ++Q+ L GPC S L 
Sbjct: 26  VFDITKYGANSNADISE--ALLNAFKEACQSTSPSTIVIPKGTFTMNQVKLEGPCKSPL- 85

Query: 78  PKVLILGTLIAPTN---LTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRAL 137
            ++ I  TL AP++   L    W+  + L + +++ G +  +DGQ A  W     C+++ 
Sbjct: 86  -ELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGI--LDGQAAAAWE----CKQSK 145

Query: 138 TCPMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIH 197
            C     +L  +++ N T+ +I  +DSK FHV++ QC N+ F  FN++AP NS NTDGIH
Sbjct: 146 KCNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIH 205

Query: 198 ISQSTNINVTNSNIGVGDDCVSIGPXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVIGI 257
           +S+S+++N+T+SN   GDDC+S+G       ++ VTCGPGHGIS+GSLG    EK V+G+
Sbjct: 206 VSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGV 265

Query: 258 RVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSCD 312
            V NCT   T NGVR+KTWP        ++ F++I++ NVSNP++IDQ YCP + C+
Sbjct: 266 FVRNCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCN 312

[Close]

BLAST of MELO3C031617.2.1 vs. Swiss-Prot
Match: sp|P35338|PGLR2_MAIZE (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.5e-63
Identity = 128/298 (42.95%), Postives = 183/298 (61.41%), Query Frame = 0


Query: 19  FDVSDYGAVADGKTNDTLALMAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSP 78
           FD++  GA  +GKT+ T A+  AW  AC   G+  +LIP+G++LV Q+  +GPC  D++ 
Sbjct: 41  FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVT- 100

Query: 79  KVLILGTLIAPTNLTA----DVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRAL 138
            + + G L+A T+L+       WI    +  L +T      +DGQG   WS  S C +  
Sbjct: 101 -IQVDGNLLATTDLSQYKEHGNWIEILRVDNLVITG--KGNLDGQGPAVWSKNS-CTKKY 160

Query: 139 TCPMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIH 198
            C +   SL +  V NG VS + L++SK FH++++QC N+      +TAP +S NTDGIH
Sbjct: 161 DCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIH 220

Query: 199 ISQSTNINVTNSNIGVGDDCVSIGPXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVIGI 258
           +  S+ I +TN+ IGVGDDC+SIGP      ++ VTCGPGHGISIGSLG+YK EKDV  I
Sbjct: 221 MGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDI 280

Query: 259 RVENCTINGTQNGVRVKTWPGDLGS--NATNLTFQNIVMINVSNPIIIDQQYCPNHSC 311
            V++CT+  T  GVR+K +  D  S    + + ++NI M + +NPI ID +YCPN  C
Sbjct: 281 NVKDCTLKKTMFGVRIKAYE-DAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 332

[Close]

BLAST of MELO3C031617.2.1 vs. Swiss-Prot
Match: sp|P35339|PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 4.4e-63
Identity = 128/298 (42.95%), Postives = 184/298 (61.74%), Query Frame = 0


Query: 19  FDVSDYGAVADGKTNDTLALMAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSP 78
           FD++  GA  +GKT+ T A+  AW  AC   G+  +LIP+G++LV  +  +GPC  D++ 
Sbjct: 41  FDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGDVT- 100

Query: 79  KVLILGTLIAPTNLTA----DVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRAL 138
            + + G L+A T+L+       WI    +  L +T      +DGQG   WS  S C +  
Sbjct: 101 -IQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITG--KGKLDGQGPAVWSKNS-CVKKY 160

Query: 139 TCPMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIH 198
            C +   SL +  V NG VS I L++SK FH+++++C ++     N+TAP +S NTDGIH
Sbjct: 161 DCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIH 220

Query: 199 ISQSTNINVTNSNIGVGDDCVSIGPXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVIGI 258
           +  S+ + +TN+ IGVGDDC+SIGP      ++ VTCGPGHGISIGSLG+YK EKDV  I
Sbjct: 221 MGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDI 280

Query: 259 RVENCTINGTQNGVRVKTWPGDLGS--NATNLTFQNIVMINVSNPIIIDQQYCPNHSC 311
            V++CT+  T NGVR+K +  D  S   A+ + ++NI M +   PIIID +YCPN  C
Sbjct: 281 NVKDCTLKKTANGVRIKAYE-DAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLC 332

[Close]

BLAST of MELO3C031617.2.1 vs. Swiss-Prot
Match: sp|P24548|PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.7e-63
Identity = 119/281 (42.35%), Postives = 171/281 (60.85%), Query Frame = 0


Query: 33  NDTLALMAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIA---P 92
           + T AL  AW++AC +   S +L+P+GN+ V  ITL GPC S +   + + GTL A   P
Sbjct: 1   DSTQALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIG--LQLQGTLKAPADP 60

Query: 93  TNLTADVWIHFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPMFATSLKLSNVL 152
           + +    WI+ + +  L++  G     DGQG   W      +    C   + +L+L  V 
Sbjct: 61  SKIKGLGWINLNKIDLLTIFGG--GVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVT 120

Query: 153 NGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINVTNSNIG 212
           N  + ++  +DSK FHV++  C N+ F  F I+A   S NTDGIHI +S  +N+ N+ I 
Sbjct: 121 NSILRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIK 180

Query: 213 VGDDCVSIGPXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVR 272
            GDDC+S+G       ++N+TCGPGHGIS+GSLG+YK E+ V+GI V+NCTI G+QNGVR
Sbjct: 181 TGDDCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVR 240

Query: 273 VKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSC 311
           +KTWP      A+ + FQ+I M +V  PI+IDQ YCP + C
Sbjct: 241 IKTWPKSEPGEASEMHFQDITMNSVGTPILIDQGYCPYNQC 277

[Close]

BLAST of MELO3C031617.2.1 vs. TrEMBL
Match: tr|A0A1S4DSN8|A0A1S4DSN8_CUCME (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103484202 PE=3 SV=1)

HSP 1 Score: 566.2 bits (1458), Expect = 4.6e-158
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 39  MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWI 98
           MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWI
Sbjct: 1   MAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWI 60

Query: 99  HFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNINL 158
           HFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNINL
Sbjct: 61  HFHSLPRLSLTAGHLSTIDGQGAQTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNINL 120

Query: 159 VDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSIG 218
           VDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSIG
Sbjct: 121 VDSKGFHVSIFQCDNIHFSGFNITAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSIG 180

Query: 219 PXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLG 278
           PXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLG
Sbjct: 181 PXXXXXXVSNVTCGPGHGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLG 240

Query: 279 SNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRELNEAM 320
           SNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRELNEAM
Sbjct: 241 SNATNLTFQNIVMINVSNPIIIDQQYCPNHSCDTRELNEAM 281

[Close]

BLAST of MELO3C031617.2.1 vs. TrEMBL
Match: tr|A0A0A0L932|A0A0A0L932_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G164560 PE=3 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 7.3e-156
Identity = 269/314 (85.67%), Postives = 285/314 (90.76%), Query Frame = 0


Query: 1   PSYPTEPPVGDPWSGLRVFDVSDYGAVADGKTNDTLALMAAWEDACYNEGESMLLIPEGN 60
           PSYP EPPVGDPWSGLRVFDV+DYG VADGKTN++LALMAAWEDACY++G SMLLIPEGN
Sbjct: 30  PSYPAEPPVGDPWSGLRVFDVNDYGGVADGKTNNSLALMAAWEDACYHQGGSMLLIPEGN 89

Query: 61  YLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTADVWIHFHSLPRLSLTAGHLSTIDGQG 120
           Y VDQ+T SGPCF+DLSPKVLILGTLIAPTNLTADVWIHF SL RLSLTAGHLST+DG+G
Sbjct: 90  YFVDQVTFSGPCFNDLSPKVLILGTLIAPTNLTADVWIHFDSLRRLSLTAGHLSTLDGRG 149

Query: 121 AQTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFN 180
           AQTWSSGS CR A+TC MFA SLKLSNVLNGTVS+INLVDSK FHVSI QCDNIH SGFN
Sbjct: 150 AQTWSSGSRCRHAMTCAMFAISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFN 209

Query: 181 ITAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSIGPXXXXXXVSNVTCGPGHGISIG 240
           ITAPW SQNTDG HISQSTNI++TNS IGVGDDCVSIGP      VSNVTCGPGHGISIG
Sbjct: 210 ITAPWYSQNTDGFHISQSTNISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHGISIG 269

Query: 241 SLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIII 300
           SLG+YKME DV GI VENCTI+GTQNGVRVKTWPGD  SNATNLTFQNIVMINVSNPIII
Sbjct: 270 SLGRYKMENDVRGIWVENCTISGTQNGVRVKTWPGDHASNATNLTFQNIVMINVSNPIII 329

Query: 301 DQQYCPNHSCDTRE 315
           DQQYCPN SCD+RE
Sbjct: 330 DQQYCPNSSCDSRE 343

[Close]

BLAST of MELO3C031617.2.1 vs. TrEMBL
Match: tr|D7SYA6|D7SYA6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0077g01890 PE=3 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.1e-90
Identity = 173/316 (54.75%), Postives = 214/316 (67.72%), Query Frame = 0


Query: 2   SYPTEPPVGDPW-SGLRVFDVSDYGAVADGKTNDTLALMAAWEDACYNEGESMLLIPEGN 61
           ++  E P  DP      +FDV+ YGAV DGKT + +A +AAW+DAC + G+S LL+P G 
Sbjct: 14  TFSAESPENDPAPDAAMIFDVTMYGAVGDGKTENGMAFLAAWDDACNHPGKSTLLVPNGT 73

Query: 62  YLVDQITLSGPCFSDLSPKVLILGTLIAPTNLTA---DVWIHFHSLPRLSL---TAGHLS 121
           + +  I+  GPC ++ SPKV I GTL AP++L A     WI F  L  L L   T  + S
Sbjct: 74  FFIGPISFIGPCQNNQSPKVEIRGTLKAPSSLKAFPTPSWIMFRQLQSLILTGETTTNTS 133

Query: 122 TIDGQGAQTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNI 181
             D QG ++W     CR  L C  F TS+ L NV NG +SNI L + KGFH+ I   DN+
Sbjct: 134 LFDAQGEESWRHAD-CRHKLKC-QFPTSIILVNVTNGNISNITLKNGKGFHMGIINSDNV 193

Query: 182 HFSGFNITAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSIGPXXXXXXVSNVTCGPG 241
              G NITAPWNS NTDG+HI  STNI++T+S IGVGDDCVSIGP      V N  CGPG
Sbjct: 194 TVHGVNITAPWNSPNTDGVHIGYSTNIHITSSTIGVGDDCVSIGPGSINITVFNTKCGPG 253

Query: 242 HGISIGSLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINV 301
           HGIS+GSLGKY  EKDV+G+RV+NCTINGTQNGVR+KTWPG   S A++  F++IVMINV
Sbjct: 254 HGISVGSLGKYSAEKDVVGVRVKNCTINGTQNGVRIKTWPGSPASKASSFWFEDIVMINV 313

Query: 302 SNPIIIDQQYCPNHSC 311
           SNPIIIDQ+YCP  +C
Sbjct: 314 SNPIIIDQEYCPWSTC 327

[Close]

BLAST of MELO3C031617.2.1 vs. TrEMBL
Match: tr|A5AMR9|A5AMR9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_012014 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.5e-89
Identity = 172/310 (55.48%), Postives = 211/310 (68.06%), Query Frame = 0


Query: 8   PVGDPW-SGLRVFDVSDYGAVADGKTNDTLALMAAWEDACYNEGESMLLIPEGNYLVDQI 67
           P  DP      +FDV+ YGAV DGKT + +A +AAW+DAC + G+S LL+P G + +  I
Sbjct: 478 PENDPAPDAAMIFDVTMYGAVGDGKTENGMAFLAAWDDACNHPGKSTLLVPNGTFFIGPI 537

Query: 68  TLSGPCFSDLSPKVLILGTLIAPTNLTA---DVWIHFHSLPRLSL---TAGHLSTIDGQG 127
           +  GPC ++ SPKV I GTL AP++L A     WI F  L  L L   T  + S  D QG
Sbjct: 538 SFIGPCQNNQSPKVEIRGTLKAPSSLKAFPTPSWIMFRQLQSLILTGETTTNTSLFDAQG 597

Query: 128 AQTWSSGSACRRALTCPMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFN 187
            ++W     CR  L C  F TS+ L NV NG +SNI L + KGFH+ I   DN+   G N
Sbjct: 598 EESWRHAD-CRHKLKC-QFPTSIILVNVTNGNISNITLKNGKGFHMGIINSDNVTVHGVN 657

Query: 188 ITAPWNSQNTDGIHISQSTNINVTNSNIGVGDDCVSIGPXXXXXXVSNVTCGPGHGISIG 247
           ITAPWNS NTDG+HI  STNI++T+S IGVGDDCVSIGP      V N  CGPGHGIS+G
Sbjct: 658 ITAPWNSPNTDGVHIGYSTNIHITSSTIGVGDDCVSIGPGSINITVFNTKCGPGHGISVG 717

Query: 248 SLGKYKMEKDVIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIII 307
           SLGKY  EKDV+G+RV+NCTINGTQNGVR+KTWPG   S A++  F++IVMINVSNPIII
Sbjct: 718 SLGKYSAEKDVVGVRVKNCTINGTQNGVRIKTWPGSPASKASSFWFEDIVMINVSNPIII 777

Query: 308 DQQYCPNHSC 311
           DQ+YCP  +C
Sbjct: 778 DQEYCPWSTC 785

[Close]

BLAST of MELO3C031617.2.1 vs. TrEMBL
Match: tr|A0A2R6P488|A0A2R6P488_ACTCH (Exopolygalacturonase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc33083 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 7.7e-89
Identity = 172/300 (57.33%), Postives = 211/300 (70.33%), Query Frame = 0


Query: 17  RVFDVSDYGAVADGKTNDTLALMAAWEDACYNEGESMLLIPEGNYLVDQITLSGPCFSDL 76
           RVFDV+ YGAV +G T  + A +AAW DAC + G + LL+P G + +  +T  GPC +  
Sbjct: 59  RVFDVTRYGAVPNGATETSSAFLAAWHDACAHPGNATLLVPNGTFFLGPVTFEGPCQNKH 118

Query: 77  SPKVLILGTLIAPTNLTA---DVWIHFHSLPRLSLTA-GHLSTIDGQGAQTWSSGSACR- 136
           SP+V I G L AP+ L++     WI F  L  L+LT     +T+DGQGA+ W+ GS+ + 
Sbjct: 119 SPRVTIRGILKAPSRLSSFPTSTWIVFRKLHGLNLTGETDTTTLDGQGAKAWALGSSDKK 178

Query: 137 -RALTCPMFATSLKLSNVLNGTVSNINLVDSKGFHVSIFQCDNIHFSGFNITAPWNSQNT 196
            + L  P+   SLK ++V NG + NI L++SK FH+S   C +I   G  ITAPWNS NT
Sbjct: 179 NKPLNRPI---SLKFAHVSNGAIRNIGLLNSKNFHMSFSHCKDIVVDGVKITAPWNSPNT 238

Query: 197 DGIHISQSTNINVTNSNIGVGDDCVSIGPXXXXXXVSNVTCGPGHGISIGSLGKYKMEKD 256
           DGIHIS STNI +T+S IGVGDDCVSIGP      + NV CGPGHGISIGSLGKY  EK+
Sbjct: 239 DGIHISGSTNIRITSSTIGVGDDCVSIGPGTTNISIVNVMCGPGHGISIGSLGKYPKEKN 298

Query: 257 VIGIRVENCTINGTQNGVRVKTWPGDLGSNATNLTFQNIVMINVSNPIIIDQQYCPNHSC 311
           V GI VENCTINGTQNGVRVKTWPG   S A NLTFQ+IVMINVSNPI+IDQ+YCPNH+C
Sbjct: 299 VRGITVENCTINGTQNGVRVKTWPGSPPSMAANLTFQDIVMINVSNPIVIDQEYCPNHTC 355

The following BLAST results are available for this feature:

BLAST of MELO3C031617.2.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016898978.1	6.9e-158	100.00	PREDICTED: exopolygalacturonase-like [Cucumis melo]	[more]
XP_004134495.1	1.1e-155	85.67	PREDICTED: exopolygalacturonase-like [Cucumis sativus] >KGN57137.1 hypothetical ...	[more]
XP_023539060.1	2.8e-127	72.15	exopolygalacturonase-like [Cucurbita pepo subsp. pepo]	[more]
XP_022979570.1	8.0e-114	72.40	exopolygalacturonase-like [Cucurbita maxima]	[more]
XP_022956245.1	3.4e-112	71.84	exopolygalacturonase-like [Cucurbita moschata]	[more]

BLAST of MELO3C031617.2.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G18180.1	1.1e-64	43.48	Pectin lyase-like superfamily protein	[more]
AT2G33160.1	4.1e-64	40.00	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family pro...	[more]
AT1G02790.1	1.7e-62	41.32	polygalacturonase 4	[more]
AT2G41850.1	6.6e-62	43.14	polygalacturonase abscission zone A. thaliana	[more]
AT1G17150.1	5.6e-61	40.97	Pectin lyase-like superfamily protein	[more]

BLAST of MELO3C031617.2.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6H9K0\|PGLR2_PLAAC	1.6e-65	42.03	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
sp\|Q05967\|PGLR_TOBAC	1.6e-65	40.74	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
sp\|P35338\|PGLR2_MAIZE	1.5e-63	42.95	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1	[more]
sp\|P35339\|PGLR3_MAIZE	4.4e-63	42.95	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1	[more]
sp\|P24548\|PGLR_OENOR	5.7e-63	42.35	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]

BLAST of MELO3C031617.2.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DSN8\|A0A1S4DSN8_CUCME	4.6e-158	100.00	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103484202 PE=3 SV=1	[more]
tr\|A0A0A0L932\|A0A0A0L932_CUCSA	7.3e-156	85.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G164560 PE=3 SV=1	[more]
tr\|D7SYA6\|D7SYA6_VITVI	3.1e-90	54.75	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0077g01890 PE=3 SV=...	[more]
tr\|A5AMR9\|A5AMR9_VITVI	1.5e-89	55.48	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_012014 PE=3 SV=1	[more]
tr\|A0A2R6P488\|A0A2R6P488_ACTCH	7.7e-89	57.33	Exopolygalacturonase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_A...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR000743	Glyco_hydro_28
IPR006626	PbH1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004650	polygalacturonase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C031617.2	MELO3C031617.2	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C031617.2.1	MELO3C031617.2.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C031617.2.1.exon.1	MELO3C031617.2.1.exon.1	exon
MELO3C031617.2.1.exon.2	MELO3C031617.2.1.exon.2	exon
MELO3C031617.2.1.exon.3	MELO3C031617.2.1.exon.3	exon
MELO3C031617.2.1.exon.4	MELO3C031617.2.1.exon.4	exon
MELO3C031617.2.1.exon.5	MELO3C031617.2.1.exon.5	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C031617.2.1.five_prime_UTR.1	MELO3C031617.2.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C031617.2.1.CDS.1	MELO3C031617.2.1.CDS.1	CDS
MELO3C031617.2.1.CDS.2	MELO3C031617.2.1.CDS.2	CDS
MELO3C031617.2.1.CDS.3	MELO3C031617.2.1.CDS.3	CDS
MELO3C031617.2.1.CDS.4	MELO3C031617.2.1.CDS.4	CDS
MELO3C031617.2.1.CDS.5	MELO3C031617.2.1.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C031617.2.1.three_prime_UTR.1	MELO3C031617.2.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 171..197 e-value: 82.0 score: 12.1 coord: 251..272 e-value: 2.0 score: 17.4 coord: 221..241 e-value: 3700.0 score: 3.2 coord: 198..219 e-value: 4000.0 score: 2.9 coord: 281..302 e-value: 2000.0 score: 5.2
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 46..312 e-value: 2.4E-73 score: 246.9
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 228..241
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 14..317 e-value: 2.5E-92 score: 311.9
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 5..312
None	No IPR available	PANTHER	PTHR31375:SF33	SUBFAMILY NOT NAMED	coord: 5..312
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	SSF51126	Pectin lyase-like	coord: 15..313