MELO3C020378.2.1 (mRNA) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAGAAAGACGACTTACCGGCCGAGGGTTTTGTTACTTTTAATTCCCTAATATTAGTACAATTTATCTGAATGAGATTGTAATTAATGGGATGAGAGGAAATTAAATATGTATTATTATATATATTTAATTAGTTGAGGAAAAATTGCCGGGAAGGTAAAAAGTTGATTTAGGGTTTGTAGGTTATTTAAGAGCCTGGTGGAACGTGCGTTGTTATTAAAAAAGAGAGAAAAATTTGTTGCTTTCTTCTTCTTCCAGGAGATTTGAGAATTGCGCCAACAGCTTCTTTGAACGGATATAGTTCTGCATCTGCGCTTGCAATCTTAACTTCTAAGGAGGATTTAATTTCAAGACATACGGAGAGATTTGCTGGTCCAACTTCAATGGACCATATAAGGTGTCCAGAGCATTACTCAAATTATGGGAATAAGGATTTGAGACGTTCGGGTCAGAGTTTTGATAGATCTCGTCCAATTTTGACCCCAAGTCTTCCATCTGAAAAAGTACTGTTTGAAGATCGGTTACAACGATTGTCATTGAAAGCAATCAATGAGTTTTACAGGTTGCAATTTCTCGAGTACTTTATTTCCTTGCATTTTTTAAAGAACTCTATGGCCGTGCATAGATGGTAATATTGGATCAACGTTTAATGGGGCTTTGCTACAAATATTAGTTCTATGACAAAGTTGGCTTTTCAAAATTGTATAAGATTCGTAAATGTAACTAAGTCATTAGTTTTTTGAGATCACTTTAGTTTATATAATAATAAACCCGTTGGTAAGCTTTTGTGCATAAGGAAATGGTGTAGTTTTAACGTGGTGTATTGTTGAGACCTTGAGCTTCTCAATCCCAGTTATTTAGAAAAATTGAAGGTTCCTTATGACCAGTCTATGAGATTGTTGGTATTTGTAAGGCAGTTTCTTGGATAAAGTTCTAAAGATTGGAACACACGCAACCTCCCTAATTGGGTTTTTTTTTTACACGAGTCAGTCATTGTTTATTTTGTTTTGGGGATTAAATAAGCACATTCAGGCTGAGAACAATGTAATACTGTGTCATTGTTTGGTGAGGTATCAAATTATTGGACTGGATTGTGCTGAGGGAGTCTGTTTTAGAAGTCAATCTGAAATTCTAATAGGCTGAAAGTCCGTTAGAAGCATTTGATGTCCTATGTCTTAGCTTTGTCATATTCTGCCTCAAAATGGAGTGGTTTTTCTTCTGACCTCATTACGTTGAAGTTTCTTGAGAATCATAAAGCAGGCTGTATGTGAAATAAATATAAATGGGAAAACTTTGAAGCTCACTCCATCGAATGACTTTGTAATGATAATGAGTTATTTACTAGGGCACTTGATTTTATTTGCCCGAGTCCAAACACGAGTTTTGATGGTTGAAGAGAAAATGTTAAAACTCATTTTCTTCCTCGATTTTTCTAGTGAATAATGAGTTCTCAGTTGTATAAATGTTTTACCGTTAGAAACTATCGAACCATATGAGTTTGACTTGGCATGGTAATATATTTAATTTACCATTTTAAAAATTTCATCCATGCTACTACATTTATTTATTTTTTAAATCTGGATTTTCAAAGCCGCAATGATGTCATATATCTGAGATTTGGATAAATAGTTGGCCTTGCATAATTGGGGCATGTGAAAGAAGTAAAAGTACAAATTTGTTGGTGGCTACTTAATTAGGATATTTAAATCCCCCTAGTTCCTTGCAATCAAATGGTTATAGGATCTGATGATATTATTGTGTGAGAGATTCATACCATAATAGAAAGGGATATAATAACCTGCTTCGCTTCATCTTTTGTTGTGTTTTCTGCTTTCAGTGCCAGAGATGAGCAGGAAGTGGCTTTGTGCATTAAAGAGTTGAACTCTCCAGCCTTCCATCCAACCATGATCAGTCTGTGGATCACAGACGCTTTCGAGAGGACGGATTTGGAAAGGGATCTATTGGTCAAACTTGTTGTTAACCTCTCGACGGCTAACGATGGTATATTGAACCAAGCTCATCTTGTTAAAGGGTAATGAGGAAAAAAAAAGCATTAACCAACCATCTATATATTTGTTGAATGGCATTATATATTTAAGAAATTTTCTGACATTTCTTTGTTATTAATCTCCCTCCTCTCGCTCCATTGGAGCAGGTTTGAAGCAGTTCTTGACAATTTAGAAGATGCTTTAAATGATGCCCCAAGAGCTTCAGAATATTTGGGTCAAATTCTTGGGAAAGTGATCACAGAAAGCATGCTTTCTTTAAGAGAAGCGGCAGATTTGATCTGTCAAGGTGGAGAGGTACCTGGGAACCTTCTTCAATCTGGGCTTGGAGCCGATGTTCTTGGCAACATCTTGAAAACAATCAAAACAGAGAAAGGAGAGGGGTTCCTAACCGATCTGCTCACAAACTCGAATTTGCGGTTGGAGACGTTTCTGCCTCACGACCCTGTGAAATCAAGAGTGTTAGAGGAATTTATTTAGGAGGAGTCAATCAAAATTGCTGCTGCTGTAATGTTGTTATATGGAATCATGATCATCTCTCTCAATGCTTTTTTAGTCTACTTAAAATAATTTGCAGGATAAGTAATTTGTATATTTTTCATTTTAAGGGTTGGGTGAGAAATTTCCTTATAATTGGGGGTTTATCAATCATCATCTTTTTCTAACGTAATTA ATGGAAGAGAAAGACGACTTACCGGCCGAGGGAGATTTGAGAATTGCGCCAACAGCTTCTTTGAACGGATATAGTTCTGCATCTGCGCTTGCAATCTTAACTTCTAAGGAGGATTTAATTTCAAGACATACGGAGAGATTTGCTGGTCCAACTTCAATGGACCATATAAGGTGTCCAGAGCATTACTCAAATTATGGGAATAAGGATTTGAGACGTTCGGGTCAGAGTTTTGATAGATCTCGTCCAATTTTGACCCCAAGTCTTCCATCTGAAAAAGTACTGTTTGAAGATCGGTTACAACGATTGTCATTGAAAGCAATCAATGAGTTTTACAGGTTGCAATTTCTCGATGCCAGAGATGAGCAGGAAGTGGCTTTGTGCATTAAAGAGTTGAACTCTCCAGCCTTCCATCCAACCATGATCAGTCTGTGGATCACAGACGCTTTCGAGAGGACGGATTTGGAAAGGGATCTATTGGTCAAACTTGTTGTTAACCTCTCGACGGCTAACGATGGTATATTGAACCAAGCTCATCTTGTTAAAGGGTTTGAAGCAGTTCTTGACAATTTAGAAGATGCTTTAAATGATGCCCCAAGAGCTTCAGAATATTTGGGTCAAATTCTTGGGAAAGTGATCACAGAAAGCATGCTTTCTTTAAGAGAAGCGGCAGATTTGATCTGTCAAGGTGGAGAGGTACCTGGGAACCTTCTTCAATCTGGGCTTGGAGCCGATGTTCTTGGCAACATCTTGAAAACAATCAAAACAGAGAAAGGAGAGGGGTTCCTAACCGATCTGCTCACAAACTCGAATTTGCGGTTGGAGACGTTTCTGCCTCACGACCCTGTGAAATCAAGAGTGTTAGAGGAATTTATTTAGGAGGAGTCAATCAAAATTGCTGCTGCTGTAATGTTGTTATATGGAATCATGATCATCTCTCTCAATGCTTTTTTAGTCTACTTAAAATAATTTGCAGGATAAGTAATTTGTATATTTTTCATTTTAAGGGTTGGGTGAGAAATTTCCTTATAATTGGGGGTTTATCAATCATCATCTTTTTCTAACGTAATTA ATGGAAGAGAAAGACGACTTACCGGCCGAGGGAGATTTGAGAATTGCGCCAACAGCTTCTTTGAACGGATATAGTTCTGCATCTGCGCTTGCAATCTTAACTTCTAAGGAGGATTTAATTTCAAGACATACGGAGAGATTTGCTGGTCCAACTTCAATGGACCATATAAGGTGTCCAGAGCATTACTCAAATTATGGGAATAAGGATTTGAGACGTTCGGGTCAGAGTTTTGATAGATCTCGTCCAATTTTGACCCCAAGTCTTCCATCTGAAAAAGTACTGTTTGAAGATCGGTTACAACGATTGTCATTGAAAGCAATCAATGAGTTTTACAGGTTGCAATTTCTCGATGCCAGAGATGAGCAGGAAGTGGCTTTGTGCATTAAAGAGTTGAACTCTCCAGCCTTCCATCCAACCATGATCAGTCTGTGGATCACAGACGCTTTCGAGAGGACGGATTTGGAAAGGGATCTATTGGTCAAACTTGTTGTTAACCTCTCGACGGCTAACGATGGTATATTGAACCAAGCTCATCTTGTTAAAGGGTTTGAAGCAGTTCTTGACAATTTAGAAGATGCTTTAAATGATGCCCCAAGAGCTTCAGAATATTTGGGTCAAATTCTTGGGAAAGTGATCACAGAAAGCATGCTTTCTTTAAGAGAAGCGGCAGATTTGATCTGTCAAGGTGGAGAGGTACCTGGGAACCTTCTTCAATCTGGGCTTGGAGCCGATGTTCTTGGCAACATCTTGAAAACAATCAAAACAGAGAAAGGAGAGGGGTTCCTAACCGATCTGCTCACAAACTCGAATTTGCGGTTGGAGACGTTTCTGCCTCACGACCCTGTGAAATCAAGAGTGTTAGAGGAATTTATTTAG MEEKDDLPAEGDLRIAPTASLNGYSSASALAILTSKEDLISRHTERFAGPTSMDHIRCPEHYSNYGNKDLRRSGQSFDRSRPILTPSLPSEKVLFEDRLQRLSLKAINEFYRLQFLDARDEQEVALCIKELNSPAFHPTMISLWITDAFERTDLERDLLVKLVVNLSTANDGILNQAHLVKGFEAVLDNLEDALNDAPRASEYLGQILGKVITESMLSLREAADLICQGGEVPGNLLQSGLGADVLGNILKTIKTEKGEGFLTDLLTNSNLRLETFLPHDPVKSRVLEEFI
BLAST of MELO3C020378.2.1 vs. NCBI nr
Match: XP_008457179.1 (PREDICTED: eukaryotic translation initiation factor 4G-like isoform X1 [Cucumis melo]) HSP 1 Score: 459.1 bits (1180), Expect = 1.1e-125 Identity = 245/297 (82.49%), Postives = 254/297 (85.52%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. NCBI nr
Match: XP_008457180.1 (PREDICTED: eukaryotic translation initiation factor 4G-like isoform X2 [Cucumis melo]) HSP 1 Score: 459.1 bits (1180), Expect = 1.1e-125 Identity = 245/297 (82.49%), Postives = 254/297 (85.52%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. NCBI nr
Match: XP_008457177.1 (PREDICTED: eukaryotic translation initiation factor 4G-like [Cucumis melo]) HSP 1 Score: 457.2 bits (1175), Expect = 4.1e-125 Identity = 233/239 (97.49%), Postives = 233/239 (97.49%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. NCBI nr
Match: XP_004138995.1 (PREDICTED: eukaryotic translation initiation factor 4G isoform X1 [Cucumis sativus] >KGN61408.1 hypothetical protein Csa_2G118310 [Cucumis sativus]) HSP 1 Score: 433.3 bits (1113), Expect = 6.4e-118 Identity = 232/297 (78.11%), Postives = 247/297 (83.16%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. NCBI nr
Match: XP_011649061.1 (PREDICTED: eukaryotic translation initiation factor 4G isoform X2 [Cucumis sativus]) HSP 1 Score: 433.3 bits (1113), Expect = 6.4e-118 Identity = 232/297 (78.11%), Postives = 247/297 (83.16%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. TAIR10
Match: AT3G60240.4 (eukaryotic translation initiation factor 4G) HSP 1 Score: 236.1 bits (601), Expect = 2.7e-62 Identity = 114/209 (54.55%), Postives = 155/209 (74.16%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. TAIR10
Match: AT5G63190.1 (MA3 domain-containing protein) HSP 1 Score: 52.4 bits (124), Expect = 5.5e-07 Identity = 33/113 (29.20%), Postives = 59/113 (52.21%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. TAIR10
Match: AT2G24050.1 (MIF4G domain-containing protein / MA3 domain-containing protein) HSP 1 Score: 51.6 bits (122), Expect = 9.5e-07 Identity = 31/128 (24.22%), Postives = 63/128 (49.22%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. TAIR10
Match: AT4G30680.1 (Initiation factor eIF-4 gamma, MA3) HSP 1 Score: 47.0 bits (110), Expect = 2.3e-05 Identity = 33/124 (26.61%), Postives = 59/124 (47.58%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. Swiss-Prot
Match: sp|Q76E23|IF4G_ARATH (Eukaryotic translation initiation factor 4G OS=Arabidopsis thaliana OX=3702 GN=EIF4G PE=1 SV=2) HSP 1 Score: 236.1 bits (601), Expect = 4.9e-61 Identity = 114/209 (54.55%), Postives = 155/209 (74.16%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. Swiss-Prot
Match: sp|B9FXV5|IF4G_ORYSJ (Eukaryotic translation initiation factor 4G OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0555200 PE=2 SV=2) HSP 1 Score: 206.5 bits (524), Expect = 4.1e-52 Identity = 113/265 (42.64%), Postives = 169/265 (63.77%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. Swiss-Prot
Match: sp|G5CEW6|IF4G_WHEAT (Eukaryotic translation initiation factor 4G OS=Triticum aestivum OX=4565 PE=1 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 3.9e-50 Identity = 109/266 (40.98%), Postives = 165/266 (62.03%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. Swiss-Prot
Match: sp|O82233|IF4G2_ARATH (Eukaryotic translation initiation factor isoform 4G-2 OS=Arabidopsis thaliana OX=3702 GN=EIF(ISO)4G2 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05 Identity = 31/128 (24.22%), Postives = 63/128 (49.22%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. Swiss-Prot
Match: sp|Q98TX3|PDCD4_CHICK (Programmed cell death protein 4 OS=Gallus gallus OX=9031 GN=PDCD4 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 5.0e-05 Identity = 45/188 (23.94%), Postives = 86/188 (45.74%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. TrEMBL
Match: tr|A0A1S3C4H6|A0A1S3C4H6_CUCME (eukaryotic translation initiation factor 4G-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496918 PE=1 SV=1) HSP 1 Score: 459.1 bits (1180), Expect = 7.2e-126 Identity = 245/297 (82.49%), Postives = 254/297 (85.52%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. TrEMBL
Match: tr|A0A1S3C501|A0A1S3C501_CUCME (eukaryotic translation initiation factor 4G-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496918 PE=4 SV=1) HSP 1 Score: 459.1 bits (1180), Expect = 7.2e-126 Identity = 245/297 (82.49%), Postives = 254/297 (85.52%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. TrEMBL
Match: tr|A0A1S3C5L0|A0A1S3C5L0_CUCME (eukaryotic translation initiation factor 4G-like OS=Cucumis melo OX=3656 GN=LOC103496916 PE=4 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 2.7e-125 Identity = 233/239 (97.49%), Postives = 233/239 (97.49%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. TrEMBL
Match: tr|A0A0A0LHZ3|A0A0A0LHZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G118310 PE=4 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 4.2e-118 Identity = 232/297 (78.11%), Postives = 247/297 (83.16%), Query Frame = 0
BLAST of MELO3C020378.2.1 vs. TrEMBL
Match: tr|A0A251QHZ6|A0A251QHZ6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G118700 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 9.5e-78 Identity = 159/295 (53.90%), Postives = 207/295 (70.17%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
|