MELO3C031083.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTTTGAATCTCTTATCTATCGGTTTCGTGGAGCCAACATTCGGTTAGTGAACCTGTGTCGATTTTGCTCTATTTTATTTGTCAGATTCGTAACAATTTTCGGCGTTTAATTTTTTTTCCTCAATTCGCGGTGGCAGATGTCGGCAATAAAGAGGCACTACCGGGGCAAATACGAGCACAGGCGGTGTTCAAGTGCGTGAGAGTGACGGCGGTGGACGACGGCGACGACGAGTATGCGTATCATGCGATGGTGAAAATTGGGGGCCATGTGTTCAAAGGATTTTTGTACGATCAAGGCGTTGAAGCCGGAGACGGATTTCCTAATGTATCAGAATTGCATTTAGGTGACGGTGTCGGTGGCGGTGGAACCATAAATAATCGGAATGGTTCGTCTTCTTCTCCGCTTGTTGATCCGTCGGATGTTTACAATACTGCCGCCTCCGGCAGCGGCGGCGTTCCGGGTTTTCTTGGTGGATCAAATTATGGTAATCAAATTAGTTGATATATATTATTCTGATTTTCTTAACAGTTCAACGTGCTTCCCCAAATCAATGGGAAGGGAACTAACCAATTATCTTTAGAAAATCTCATTTTATTTATGTCTAATCTGATTGTGTATAACTAATTTCTCTCAACTCTGATCTTGCAACTTTCATTATTAATCGAGTCATTTACTAATCTGGGGGCATCTGTTCTTGAAAATGTTATGAGGATTGGTATCTCTTCTTGCATGCTTCTTATTCTTTTCTTGACTTACAAATCTTCTTGTCTAGGCTAAATCTACAGTGTTTGTTGGTTATTTTATTGCTTAAAATTAGATGAAATCATAGGGATGTGAGTCATCTTATCTTGTGTTCATATTTGTCTTGTGTGCTCTTACTGTTCACTCATGTGCCTAACAATTTATTGTTTTTCAAAGCAATCTCATTTGATACTATCTGCTTTTTTTTAAAAAAAAAAAAAATTCTTGTAATAGTTTAGTTTAATCATGTGGGGGTTTCTGTTGATGGGTATGGAAATATATTCCTAACCTCTGTTGGGTTGGCTTTTTCTTTTTGGTTGGTTTGCTTCTTCGGGAGCTGGAAATGCTGAATTCCATTGTTAGGTGATGGATTTAGCCTTTGGTTTTCTCAAAGCTGCTGAGGTGTCACAATCATAAGATGTTTGAGAAAATGATAACTTTGAAAATGATGTCTTTTTCCCCTTCACTATTCCACTTCTTTTAGTCCACTAACATGTCTTGTTCATTCTTGCTTCTGTTGTATATCTTTTGTGTCCAATTTTGATTTATTGATTGTAAGTTTATGTTCTATATCCTAGAAAACTTCATACTCTACCTATCAATCTTTCTTTCCTCCCTTCTAAATCAATTGTTTCTCTCGTTTCTCGTGCACCGGTTTTCATTTTGCTTCCTTGTTTACCATGCCTTTTTGCTGGGATAATTGCCATCATCATTTCATGTATATATTGTTTGAAGATATGATATTAAATCTGGATTCGCAGGATGGTTGATGTAGAATTAATTTGACACGCCATGTTGTGTATTTATTGTTGACATTTTAGCATCTATTTTGTCTGATGCTAATAGGGCAACAGTCCTTTGAAATGCTGAGTAAGCCCCTTTTGTTTGTTTTAAATAAAAAATTGAAATAATCCATTGTTGTTTGCCATTGTTGACCTAATTCATTTATTATAACAAAGTGGCCTACACATTGAATGCTTGCATTGCGCTTGTTTTAAATGAGGAGTGGATAGATTTTCTCCTTGGATTTCTTTAAGTATTTTCCCAGTGTTGGTACCTTTGGGAACAATCTTAACCTTTGCTCCACCTGCACATTCTGATTGTTCTGTCTGTATTTGAGCATTGAGATGCCACTGCCAGGCTTAAGGGATTAGGAAGCTTAATAATCAAATCTCCATAATGGGAGGATAAGTATTTGTTTTTTTTTTTTTTAGTTTTGTAGTAATTTGAAATTAAGGTTTAAATATTTGATTGATTAGTTCCACTTGCGATTTCTTTATTTCTTGCACATGCATAAAATAGTGGCTTTATTTTTCCTGGATTTCTGGTTTCAACCTTTGGATATTAATATAGGCATGGGGTGAACAATTTTCTTGAAGTATAGAAGAACAAATATTTATTAGGCCTTACTATTTTGTTTTTCTATAGCTGTCGGTGTTCGAGTGGGTTAGGCTTACTTTGGCTAATCTCTCTTGACATTGCGATACTTTAATACATATGGATGTCAAGGAATCTTGTAGGATATTCAACTTTATGTCGATGGTCACCATGATTGAGACTCCGACTCTTTGGTCCCTTAGACCTTAATTTATTTGAATTTATATTTATAGGCTTTCTTCTCTATAGTAAATGGAAAGATATTCCTCCTTTGCTTGCGAGGGCTCATTTATTATACTCTTCCCTTTACATTTTATTTATTTTAATTTATTTTTTGTGTGTAATTATTGCCTTTGGTGCTTCCATTTAGTGGTGTGTTCAGTGTTTCCCAGTTTAGCTAGTCTAAATATTTCACCTACTCCATGAAAAATTGGAGAGTAAGCCTTTTTGTGTATTCATCAAGTCCTCTCTTGCATCCAGGGAGCCAACTAGTTTCATATCATATGTGCTTCTATATCAATTTCATTCCATCTCTTAGACCATTCTTTACTCTAGTCTTGCTCGTTTTATTGCTCGTGTGAAGGAAATTTCAGCCTATAATGCATCTGTATCTCGTTTTACTTTAATTTTGTTCGTTTAATTTGTAACTTTGTGATGTTTTGCATTTGGTTGCATCGTACGGAGTTGTTTTAGATTTGATTTATATGATATTGGAATTAGTTTTTATGTACTGATAAATGACGACACTTATTGCCCTAAAATCGATCTCTCTGATTTATCTTTTTCACACCAAATGTTGTCTTTTTATCTGTGTTTTTTGTGATTTTATGTATGAGGTCTTTTCTTTCTTGTTTGTAGTGGAAGACTTAGGTGTATATTTGTTTCGTTTTTTTGATCGAGACATTATTTTGCTCGTAAAATGAGCTTTGTGAAAGTCTTAAAAAGGAACAATGAAAGAAAATAGAGAGAATTCTATATTTACTTCTCTGAATTCTTTTTCCATTTTGTTTTCACTTTTTTTGTTACCTCTTAATTTGAGTGCAAAATTGACTCTTTTCTATCCTTCAATTTCCTAATTAAGTTGAAGGTTCTTTTTAAATTATTAATCATTACCCATTTTTCTACTTACAGGTATTTAGGGTTTTAGTTGTATACGCTAATCGAATCAATTTTGATGGTGTGAAAAATAACGTACGTCTTTTGAGCAGTGGAAGACATGATGTTATTTAATTAATCAAGGACATAATCTATATGTTTGGATTAAGAATATGGGTTTTTAAGGATTCGATTGCATGATGAATGGTTGATGTTGCATCTCTAAGTGAATATCACTTTTGTATCAACTTTTAAACGTAGTCTATTATTCTTTTCTATAGCTGAATTGACCTTTTGCTATTTTTGTTTTGTTTTCCATCGAAATTTCTCTACGCTTTTCCAACTGTTAGACAAAGTGTTATTGAAGATTTGATTGATTTTTTAGGCTTTTGTTTGGTATTATTTTTCCCTTTGTTTAAGCTGTCTGTCTGTATATGTATAAATATATACTGCTTTTATTTATTGGTTTCTTTGTATTATTGTCTTTTCAACCAGTCTTTTCGTAAGCAAATATTGTGTTTGAATAACACGGATCAGAGTGGATAGGATCGTGCCATCGAGTTAGATGGCTTAGTCGTGAGGCTATGGGTCGTGAGCTTCATGATCTCTTTCCCAAGTTGACGAGGCCGGAAGGAAAAGGGGTGCAAGTGAATTATCATAAGTTTAAAGAGATTTTTTGA ATGCCTTTGAATCTCTTATCTATCGGTTTCGTGGAGCCAACATTCGATGTCGGCAATAAAGAGGCACTACCGGGGCAAATACGAGCACAGGCGGTGTTCAAGTGCGTGAGAGTGACGGCGGTGGACGACGGCGACGACGAGTATGCGTATCATGCGATGGTGAAAATTGGGGGCCATGTGTTCAAAGGATTTTTGTACGATCAAGGCGTTGAAGCCGGAGACGGATTTCCTAATGTATCAGAATTGCATTTAGGTGACGGTGTCGGTGGCGGTGGAACCATAAATAATCGGAATGGTTCGTCTTCTTCTCCGCTTGTTGATCCGTCGGATGTTTACAATACTGCCGCCTCCGGCAGCGGCGGCGTTCCGGGTTTTCTTGGTGGATCAAATTATGGCTTTCTTCTCTATAAGTGGATAGGATCGTGCCATCGAGTTAGATGGCTTAGTCGTGAGGCTATGGGTCGTGAGCTTCATGATCTCTTTCCCAAGTTGACGAGGCCGGAAGGAAAAGGGGTGCAAGTGAATTATCATAAGTTTAAAGAGATTTTTTGA ATGCCTTTGAATCTCTTATCTATCGGTTTCGTGGAGCCAACATTCGATGTCGGCAATAAAGAGGCACTACCGGGGCAAATACGAGCACAGGCGGTGTTCAAGTGCGTGAGAGTGACGGCGGTGGACGACGGCGACGACGAGTATGCGTATCATGCGATGGTGAAAATTGGGGGCCATGTGTTCAAAGGATTTTTGTACGATCAAGGCGTTGAAGCCGGAGACGGATTTCCTAATGTATCAGAATTGCATTTAGGTGACGGTGTCGGTGGCGGTGGAACCATAAATAATCGGAATGGTTCGTCTTCTTCTCCGCTTGTTGATCCGTCGGATGTTTACAATACTGCCGCCTCCGGCAGCGGCGGCGTTCCGGGTTTTCTTGGTGGATCAAATTATGGCTTTCTTCTCTATAAGTGGATAGGATCGTGCCATCGAGTTAGATGGCTTAGTCGTGAGGCTATGGGTCGTGAGCTTCATGATCTCTTTCCCAAGTTGACGAGGCCGGAAGGAAAAGGGGTGCAAGTGAATTATCATAAGTTTAAAGAGATTTTTTGA MPLNLLSIGFVEPTFDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGGHVFKGFLYDQGVEAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASGSGGVPGFLGGSNYGFLLYKWIGSCHRVRWLSREAMGRELHDLFPKLTRPEGKGVQVNYHKFKEIF
BLAST of MELO3C031083.2 vs. NCBI nr
Match: XP_008449658.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 240.0 bits (611), Expect = 6.5e-60 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of MELO3C031083.2 vs. NCBI nr
Match: XP_008449660.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X3 [Cucumis melo]) HSP 1 Score: 240.0 bits (611), Expect = 6.5e-60 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of MELO3C031083.2 vs. NCBI nr
Match: XP_008449659.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 [Cucumis melo]) HSP 1 Score: 238.8 bits (608), Expect = 1.4e-59 Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0
BLAST of MELO3C031083.2 vs. NCBI nr
Match: XP_011657617.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN48103.1 hypothetical protein Csa_6G432270 [Cucumis sativus]) HSP 1 Score: 196.4 bits (498), Expect = 8.2e-47 Identity = 98/117 (83.76%), Postives = 98/117 (83.76%), Query Frame = 0
BLAST of MELO3C031083.2 vs. NCBI nr
Match: XP_022987026.1 (protein LATERAL ROOT PRIMORDIUM 1-like [Cucurbita maxima]) HSP 1 Score: 195.3 bits (495), Expect = 1.8e-46 Identity = 98/117 (83.76%), Postives = 104/117 (88.89%), Query Frame = 0
BLAST of MELO3C031083.2 vs. TAIR10
Match: AT5G12330.4 (Lateral root primordium (LRP) protein-related) HSP 1 Score: 125.9 bits (315), Expect = 2.5e-29 Identity = 61/89 (68.54%), Postives = 75/89 (84.27%), Query Frame = 0
BLAST of MELO3C031083.2 vs. TAIR10
Match: AT1G19790.1 (SHI-related sequence 7) HSP 1 Score: 72.8 bits (177), Expect = 2.5e-13 Identity = 48/123 (39.02%), Postives = 64/123 (52.03%), Query Frame = 0
BLAST of MELO3C031083.2 vs. TAIR10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related) HSP 1 Score: 69.3 bits (168), Expect = 2.8e-12 Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of MELO3C031083.2 vs. TAIR10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related) HSP 1 Score: 69.3 bits (168), Expect = 2.8e-12 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 0
BLAST of MELO3C031083.2 vs. TAIR10
Match: AT4G36260.1 (Lateral root primordium (LRP) protein-related) HSP 1 Score: 67.8 bits (164), Expect = 8.0e-12 Identity = 28/52 (53.85%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of MELO3C031083.2 vs. Swiss-Prot
Match: sp|Q94CK9|LRP1_ARATH (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.5e-28 Identity = 61/89 (68.54%), Postives = 75/89 (84.27%), Query Frame = 0
BLAST of MELO3C031083.2 vs. Swiss-Prot
Match: sp|Q9FXH7|SRS7_ARATH (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.5e-12 Identity = 48/123 (39.02%), Postives = 64/123 (52.03%), Query Frame = 0
BLAST of MELO3C031083.2 vs. Swiss-Prot
Match: sp|Q9XGX0|SHI_ARATH (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 5.0e-11 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 0
BLAST of MELO3C031083.2 vs. Swiss-Prot
Match: sp|Q9SD40|SRS1_ARATH (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 5.0e-11 Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of MELO3C031083.2 vs. Swiss-Prot
Match: sp|O65517|SRS2_ARATH (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10 Identity = 28/52 (53.85%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of MELO3C031083.2 vs. TrEMBL
Match: tr|A0A1S3BMJ0|A0A1S3BMJ0_CUCME (protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491474 PE=4 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 4.3e-60 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of MELO3C031083.2 vs. TrEMBL
Match: tr|A0A1S3BN66|A0A1S3BN66_CUCME (protein LATERAL ROOT PRIMORDIUM 1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491474 PE=4 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 4.3e-60 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of MELO3C031083.2 vs. TrEMBL
Match: tr|A0A1S3BMI2|A0A1S3BMI2_CUCME (protein LATERAL ROOT PRIMORDIUM 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491474 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 9.6e-60 Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0
BLAST of MELO3C031083.2 vs. TrEMBL
Match: tr|A0A0A0KF01|A0A0A0KF01_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G432270 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 5.4e-47 Identity = 98/117 (83.76%), Postives = 98/117 (83.76%), Query Frame = 0
BLAST of MELO3C031083.2 vs. TrEMBL
Match: tr|A0A2C9WDR0|A0A2C9WDR0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G140000 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34 Identity = 81/118 (68.64%), Postives = 90/118 (76.27%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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