MELO3C030921.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGTGGGTGGAGGTCGACAACGGGACGTTTCAGCCCGGGTACCTAAATCAACTGGCGAGAATGATGGCCTTCAAGATCCCATGTTCTAACGTCCATGCTTCAACGATCGATAGCCGAATAAAATTGTTGAAGAGAATGTTCCATGCAATTGGGGAGATGCGTGGCCCAACTTGCAGTGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTGGCAGAGAAAGAAGTCTTCGACGATTGGGTCAGGGTGCGTTACTAGTCATTTGTGTGATTACTGTACTATATTTTAAAAAATTGACTAACAATTTATTATTGTACTTATACAGAGTCATCCGGCGGCCAAGGGCCTCCTTAATAAGTCGTTTCCCCACTATGACGAACTGTCGTACGTGTTTAGCAAAGATCATGCAACGGGAGGTCGAGCCGAGAGTTTTGCGGATGTTGGGTCAAACGATCCTACTGGGTACGACGCATTTGCCGCTAACGCTGCGTCGGATACGGACTTCCAGCCTATGTACAGTCGAGGATTGAACATGTCGCCTGATGAATTGATGGGAACAAGAACCGCTCGGGTAAGTGAAGGTAGATATGTTTCGAGCGGGTCTAAACAAAAACGTGGAGGATCGACCATAGACAGTGGGGACATACTTCGCACTGCGATTGAGTATGGAAATGAACAACTGAACCGCATTGCTGAATGGCATGTCCTACAACGTCAAGACGCAACCCAAACACGTCAAGAGGTTGTCCGACAGTTGGAGGCCATCCCCCCCTGAGCTGACATTGATGGATAGGTGTCGATTAATGCGTATACTTATACATAATGTCAATGACATGAAAGCTTTCCTTGAGGTTCCTGACAATATGAAGCCGTACTGCAGCATCATTCTTGAAGAAAACCGATGACTAGTTTGTTTGTTATATTTGGATTAGTTGTTTTTCTTACTTGAACTATATGTTCTTCGTCTTACTTATTTTGTCTTATCTAACGAACTTATCTTTCTGTTCAAGCTTTATGGTTTGTATTTTCATTTCGCTTTCAAATGTAATGGTTTGATATTGTAAAGAAGTCATCATATTGATGTACTGTTTTCGTTGAA ATGTTGTGGGTGGAGGTCGACAACGGGACGTTTCAGCCCGGGTACCTAAATCAACTGGCGAGAATGATGGCCTTCAAGATCCCATGTTCTAACGTCCATGCTTCAACGATCGATAGCCGAATAAAATTGTTGAAGAGAATGTTCCATGCAATTGGGGAGATGCGTGGCCCAACTTGCAGTGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTGGCAGAGAAAGAAGTCTTCGACGATTGGGTCAGGAGTCATCCGGCGGCCAAGGGCCTCCTTAATAAGTCGTTTCCCCACTATGACGAACTGTCGTACGTGTTTAGCAAAGATCATGCAACGGGAGGTCGAGCCGAGAGTTTTGCGGATGTTGGGTCAAACGATCCTACTGGGTACGACGCATTTGCCGCTAACGCTGCGTCGGATACGGACTTCCAGCCTATGTACAGTCGAGGATTGAACATGTCGCCTGATGAATTGATGGGAACAAGAACCGCTCGGGTAAGTGAAGGTAGATATGTTTCGAGCGGGTCTAAACAAAAACGTGGAGGATCGACCATAGACAGTGGGGACATACTTCGCACTGCGATTGAGTATGGAAATGAACAACTGAACCGCATTGCTGAATGGCATGTCCTACAACGTCAAGACGCAACCCAAACACGTCAAGAGGTTGTCCGACAGTTGGAGGCCATCCCCCCCTGAGCTGACATTGATGGATAGGTGTCGATTAATGCGTATACTTATACATAATGTCAATGACATGAAAGCTTTCCTTGAGGTTCCTGACAATATGAAGCCGTACTGCAGCATCATTCTTGAAGAAAACCGATGACTAGTTTGTTTGTTATATTTGGATTAGTTGTTTTTCTTACTTGAACTATATGTTCTTCGTCTTACTTATTTTGTCTTATCTAACGAACTTATCTTTCTGTTCAAGCTTTATGGTTTGTATTTTCATTTCGCTTTCAAATGTAATGGTTTGATATTGTAAAGAAGTCATCATATTGATGTACTGTTTTCGTTGAA ATGTTGTGGGTGGAGGTCGACAACGGGACGTTTCAGCCCGGGTACCTAAATCAACTGGCGAGAATGATGGCCTTCAAGATCCCATGTTCTAACGTCCATGCTTCAACGATCGATAGCCGAATAAAATTGTTGAAGAGAATGTTCCATGCAATTGGGGAGATGCGTGGCCCAACTTGCAGTGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTGGCAGAGAAAGAAGTCTTCGACGATTGGGTCAGGAGTCATCCGGCGGCCAAGGGCCTCCTTAATAAGTCGTTTCCCCACTATGACGAACTGTCGTACGTGTTTAGCAAAGATCATGCAACGGGAGGTCGAGCCGAGAGTTTTGCGGATGTTGGGTCAAACGATCCTACTGGGTACGACGCATTTGCCGCTAACGCTGCGTCGGATACGGACTTCCAGCCTATGTACAGTCGAGGATTGAACATGTCGCCTGATGAATTGATGGGAACAAGAACCGCTCGGGTAAGTGAAGGTAGATATGTTTCGAGCGGGTCTAAACAAAAACGTGGAGGATCGACCATAGACAGTGGGGACATACTTCGCACTGCGATTGAGTATGGAAATGAACAACTGAACCGCATTGCTGAATGGCATGTCCTACAACGTCAAGACGCAACCCAAACACGTCAAGAGGTTGTCCGACAGTTGGAGGCCATCCCCCCCTGA MLWVEVDNGTFQPGYLNQLARMMAFKIPCSNVHASTIDSRIKLLKRMFHAIGEMRGPTCSGFGWNDEQKCIVAEKEVFDDWVRSHPAAKGLLNKSFPHYDELSYVFSKDHATGGRAESFADVGSNDPTGYDAFAANAASDTDFQPMYSRGLNMSPDELMGTRTARVSEGRYVSSGSKQKRGGSTIDSGDILRTAIEYGNEQLNRIAEWHVLQRQDATQTRQEVVRQLEAIPP
BLAST of MELO3C030921.2 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 384.0 bits (985), Expect = 3.5e-103 Identity = 189/225 (84.00%), Postives = 202/225 (89.78%), Query Frame = 0
BLAST of MELO3C030921.2 vs. NCBI nr
Match: XP_008459131.1 (PREDICTED: uncharacterized protein LOC103498331 [Cucumis melo]) HSP 1 Score: 340.5 bits (872), Expect = 4.5e-90 Identity = 170/217 (78.34%), Postives = 183/217 (84.33%), Query Frame = 0
BLAST of MELO3C030921.2 vs. NCBI nr
Match: XP_008466949.1 (PREDICTED: uncharacterized protein LOC103504332, partial [Cucumis melo]) HSP 1 Score: 288.5 bits (737), Expect = 2.0e-74 Identity = 134/157 (85.35%), Postives = 143/157 (91.08%), Query Frame = 0
BLAST of MELO3C030921.2 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]) HSP 1 Score: 257.3 bits (656), Expect = 5.0e-65 Identity = 123/227 (54.19%), Postives = 167/227 (73.57%), Query Frame = 0
BLAST of MELO3C030921.2 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 222.6 bits (566), Expect = 1.4e-54 Identity = 118/227 (51.98%), Postives = 147/227 (64.76%), Query Frame = 0
BLAST of MELO3C030921.2 vs. TAIR10
Match: AT1G30140.1 (unknown protein) HSP 1 Score: 61.6 bits (148), Expect = 7.3e-10 Identity = 35/103 (33.98%), Postives = 60/103 (58.25%), Query Frame = 0
BLAST of MELO3C030921.2 vs. TAIR10
Match: AT4G02210.1 (unknown protein) HSP 1 Score: 49.3 bits (116), Expect = 3.7e-06 Identity = 23/85 (27.06%), Postives = 47/85 (55.29%), Query Frame = 0
BLAST of MELO3C030921.2 vs. TAIR10
Match: AT2G24960.1 (unknown protein) HSP 1 Score: 43.9 bits (102), Expect = 1.6e-04 Identity = 21/77 (27.27%), Postives = 38/77 (49.35%), Query Frame = 0
BLAST of MELO3C030921.2 vs. TrEMBL
Match: tr|E5GCB5|E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 384.0 bits (985), Expect = 2.3e-103 Identity = 189/225 (84.00%), Postives = 202/225 (89.78%), Query Frame = 0
BLAST of MELO3C030921.2 vs. TrEMBL
Match: tr|A0A1S3C8Z4|A0A1S3C8Z4_CUCME (uncharacterized protein LOC103498331 OS=Cucumis melo OX=3656 GN=LOC103498331 PE=4 SV=1) HSP 1 Score: 340.5 bits (872), Expect = 3.0e-90 Identity = 170/217 (78.34%), Postives = 183/217 (84.33%), Query Frame = 0
BLAST of MELO3C030921.2 vs. TrEMBL
Match: tr|A0A1S3CTN6|A0A1S3CTN6_CUCME (uncharacterized protein LOC103504332 OS=Cucumis melo OX=3656 GN=LOC103504332 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 1.3e-74 Identity = 134/157 (85.35%), Postives = 143/157 (91.08%), Query Frame = 0
BLAST of MELO3C030921.2 vs. TrEMBL
Match: tr|A0A1S3B4L3|A0A1S3B4L3_CUCME (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 3.3e-65 Identity = 123/227 (54.19%), Postives = 167/227 (73.57%), Query Frame = 0
BLAST of MELO3C030921.2 vs. TrEMBL
Match: tr|E5GBB2|E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 9.0e-55 Identity = 118/227 (51.98%), Postives = 147/227 (64.76%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |