MELO3C030596.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C030596.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionMADS box protein
Locationchr04 : 19000265 .. 19007082 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCAAAATTGTATCTTCAATTTCTACCACAAATGAAAATAAGGGAGTTAGTATTACCAGATCTCATGAGGTTCATGGAAAATTTAGTACAGATAGGACATCCTCAACTGCTGGGAAAAGTGGAAATCTCTCTCTTGATGCTTTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAACCAACTAATGCAAGAATCTATTTCAATATTGCACAAAAAGGTGAATAACTTAGTTTTAGAGTAATTAATGTTTTGGCATCATTAATTATGCATACAGGACTATAATTTTTTATTTTCTATGGTGTAAAATTTGGTTCATAAAATGGTTGTAGGAAAAGGCATTGCAAGAGAACAGACAACTAGCAAATAAGGTATAAAATTAATTATGTCCTATATATTTTCAGTGTCGTATATAAATTAATTAAAGTAATTTAATATTGTTGAATAGCCTCTAAGAATGTAATATGTTCATATAATTTGAAAATTTTAGGTAAAGGAAAATGAGAAGGCTTTGGTTGAACGTGGACAGTGCGATGTTCCAAACTTGGTTCATAATAAACGGCCCATTTTTTGAATGACACCACCAATTCCTTCTTTATCTTTCGGGTATATTCCTCTTTCTCTCTTTCAACTGAGAAATCATTTCTCCTTATGTTAATAGATACGTATAGCCTGTATTGATTCAACTATATCATAATTTCATCGTCAATATACGAAGAAAGAAGCTGCCATTAGTTATCTTGAAGGGATAATTGAGAAACTAAGGAGTACTAAGTTGGTATGATGAATTGTTTCTTTTTTTATATACTGATTTACTTTTATTTCTGTATTTTTTTTTCCTTTTTGAAAAATTGAAAATATTAGAAAAGAAGATGAATATTTTGTGGAGGAAGATGGGTGGACTCAGATTTTGTCCACATGAACCTCCATTTCCTCACATCCGTGATACACGACAATGGTTCGTTCTGATTCTGAAAGATGAAGCTGAAGTATAAGACCCGTAAGTTGTTATGCGTCTTCCATGGCCTTTATTGTGTTCGTTACTCTTTTTCACCGTTGCCAGGCAAACCCAACTTCAAATTAGTTCAAAGGAACAACCCTGCTCTTCTCTTTTCTTCATTCTCTACCACTCAGGCTTCTTACAACACTCTCGTCTCTGAGGTACCATTTTTCTTTCACTTTCCTCCTTTTCATTTGTTTCTTTTTTATGTGGGCTATGACATTACTGCAAGTTTGGTAGGTTGAAGTTGCGAGTTTAATTGAAAGGGATCTCTGATTCTGATTTGCATTGCTGTCCTTCGAGTTTGAAGGATTCTGTTGTTAATTATTGGTTGGGTCTCATCCAGATTGCTAGTTAAATTTGACCGAAGAAACTAATTTCCAAAATTTGTGTGTTTTCATGTTGATTTTAAGTTCTGGGTTGCACTCAATCGTTTAAATTTTCCAATGATGAACTTGTAATGTGTTGTTGAACTTTCAGTAAGCAATACACGTTATAATACTACTGTAAATAAGATTATAAGAAATTCAGATGACTATTTATTTTATTGGTCCCTTCAAATCTTGAATTAAGTTCAGATTTAAACCTTTCTTGGATGGTTTGAACAATTATTGATTCAAAGCATCCAAAAAGCAAAGAGGGATTTGTCTGTTCTTTCTGCGTTATTTTTGTCAAATTTGAATTAACTCTGTCTTATGATGCATGGATCTTTGGTAGGCTGTTAGGATATGAAGATTCTAGTAAAGTTGTTTCTGTAATTCTAAAGATTAAATGATGCTTCAAATGCATTGTTGGTTGTTGATTGTATATATTGTGTCGATATTTTTGTTAAGAAATGCAATGGTAGGAAAGGGGAAGACCTTTAATAACACTAGAGTGAAGCATAGAGTGAAGGGGCCGATTAATAGAAGAAGATGGGGTTTAGTATGGAAGTTAATCTAGTAGTTTATGTTGGAATTTTCTCACGAAAAACTCTTTGAAACTAAAAATCTCAAAATACTCCAAATTCTCTTTAATTCATAACAAATTAAGATCCCACAAGTGAATAGTAGGAAAGACTCTAATAGTTGTCCATAAAGTGTTCGTGATCTCAATCGAAAGATAGTAAGAGTTTTGAGCTACGCACCAATGTAAGTTTAGCAAACTCTGTTTTTAGTTTTAGAACAAGCAAGCATAATTGTTTAAACTAATGTAATTAGAGTTTTTTAGTTCCAAATTTTCTTCCTCTAGTATGTTTGTAATTTTTCAGAGTTGATGGCCACAGTTAAACTCTTGTGCGTGCCTCAAGGGAGTTTGTGATTATGCTTGGTAATTGATTGGAGACCACCTTCTGAAAGTGGCCATCTTTGCAATTATAAAATTTAGTATGCATGTTGGGGTTTGGGAATTGTTTATAATATTAATTGAGGACAAAAAAAGAATTTAATTTTGGGGGCTGTAATTCCATGGCATAAAATGCATGAATGTGAGCTTGTGTTGTGTGATGATGTTTTGTTTGAAAATTAAAGATAAGTTTCTAAGCATGTTACCCCTTTTACGTTTTAAGTTAAAGATATTCATATAATTAATTATGAGATAAGGGTTGCTCTTTCAAGAACTAATTTAGTAGGATCATGAGGTTTCTTGACTATTTTGGAGACTAATGTACCTACAGGATATATGATGATATGATCTACCGCAGTACTGAGCGCTAAATTTCCATAATTTCTAATAGTCAAGGTTGGTTATGCTTTCCACTTTTTATCCTTCTCTGCAATTTTAGTGCTTCAAACAGCTTTGCTATTCTAAATAAATGGTTTATTTGGATATTGTTTGTAGATAATTGAAGTCATATCGGGTTGAAAGCTAAGCGAGTGTGCAGATGGCAAGGCGACAGTTGAAAATTGAAGACTGAAAAGGCGTTTAGGATTTCTAATTATTTAATTCTTGTATTAGGATCTTTTTTCATGTATTTTTGTAGAATGTATATATAAACACAATATTAAGATTTTATTTTGTGTATTCAAATGTAAAAGACAAATATTATAGTTTCTAAAATAATATGAATTTCATTGATTTGTTGCTGTGAAAAAAATATTTATCTACATGGACCCAATATCGATCTATAAAAAATGGACAATAATGCAATAATTAAATAAAAATAAATTTGTAAAAATGAACCCAAAAACTAGCTTTAATATCGGTTTTAAACGGACATCAGAGTTCAACCGACATTAAAGGGCTTCAATAACACTATCAAAGATGTCGGTTGAAAACTGACATTAAAGAGGCCTTTAATGTCGTTTTTAAACCGACATTAAAGCCAAACCAACATTAAAAGGCTTCAATAACACTATCGAAGATGTCGGTTGAAAACTGACATTAAAGACCTTTAATGTCGTTTTTAAACCGACATTAAAGAGGCCTTTAATGTCGTTTTTAAACCGACATTAAAGCCCAACCGACATTAAATGCCTTTAATAATGCTCGCAAAGATGTCGGTTGCCAAGTGACATTAAAGCCCTTTAATGTCGGTTTATGTCAGATTTCTTCTAGTGGATTTGGGTTATTAAGACAAAACTAATAATAAAATCAATAAGACTTGTTGAAATTATAATAATAACACTTTATTAATAACAATCAAGGGATAATATTTACTATCTATGAGTTTTAGGATAATAATAACACTAATTTAATTAAATAATTATTGAAATCCATAACAGACAAACACCGTAGTTATTCCAACCAAGAAAAAATTCAAAAAAAATAAAAATAAAAATAAAAATAAAAAGGAGGAAAAAAAGCAAAACCAAAAGAAATTAATGTACACCTTAAATTAAGATTAATTAAATCTCCTGAGTCTTGAAAGAAATCAAGGGGCCATTTTTTATGACAATTTTTTCGTTAATTGAAATGATTGCTAGAAAAAATTTATAATTACCGCAACTTACTACTATTACCAAAGACATAGTAAGAGTGGATTGGAATGGATCTACAAGAAATTGATTTTTAGTTATCTTTTATCAATTTGAAGCTTCTTATTTTAGGTAGAGAACGCAACTTTAATGAAAATTCAATATAAGATAAATTTTAATTATAGAAAGCAATAAAAGTGGCACAAGAGTGAGAATCAAGTAAAGACACGTTCTTATAATTATAAATCAATGAGTTTAGTGAACTGTTTTCTAGGGGTGTTAGAAAAAATCGAAAATCCAACCTACTCGGATTGCCCAACCCAAACTGTAACGGTTGGGTTGGGTTAGAAAATAAAAAAATATTTATAATAAGTCGAGTTACCGGGTTTGGCAATTAAGGGTCAGATTGACCCAACTAGCACCATTTTGGTTTTAGAAAACTCGTAATTTTGTTTTTCTCAGGGTTAATCTCGACCACGATCCACCTAAGATTCTTCCCAAATTTTAAGAAACCTTTTAAAGGAAATTTCTCGATCTCTCTCGATTGAGTACGTCACCGAGATAGTGCGTTTTTTATGAAAATTTTGAAATTGAGATTAACTCTTCTCAGGCCAAATTTACCACGAGAGTCCTCGAGTTGAAAATAGAAGTATTTAGGTTAAATGTTCTCGGGCCATCGTGACCCCGAGATGTATTGAGCTAAAAAATATTAGCAATTATGTCATTGATCTTGGGCCAAAGTTGCTCCAAGATGGTCTCGAGCTAAAGAACAAAAACATTATGTAATATGATCTCGGGTTAAGGTTTCTTCGAGATGTCCTCGAGTTTAAAAATAGAAGCTAAAATGGAAACTAAAAACTAAGACCTAGATACTTTTTAGTCATTTTAGAAAAATATCTTAGCCATAAGTTAAAGAAAATATCATATTACATATAACCAATTTAACAACATGCACAAGGTGGCCGAACACTTGGGTGTTGCTGTGCACAAAGGATGTTGGAGCGCCGAAGGAAATGCCATGCGTATGACAAGCAACGCATACAGCATGCCCATGCGCACACGAGATTAGCATACGGCCCAGGGCCCTTACAAGTGTGCCAGGCCACCGCCTAACCTGTGCACCAGCTCAGCCCATATGAAATTTTTGGGCATTTTTTAGTATTTTAGGAAGTTTTGCTTAGAGTTTAGGTACTTTTTGAATATTAGGGACTACATAGAGTATAAATACCCTATTTTCAGGACAAGTAAAGTTTGGTGAATTTTCTCAAGTCAAAGAGGAAATCCTCAAGTTTGTTAGTAAAACTTATTTTAAATGTGTTTATCAAACATATCAAGTTGCACAAGCAATAGCTTGTGAGTAACTTGCATTAAATGGTTTCTAAAAGATATTTCAAAGTTTATGATTTCAAGGAACACAAGCCACAATTTGTGAATAATTTTCATTTGAATGATTTACTTAAATACTTATGATTTTCGAGGCGAATTTCAAGCTTTTCAAGCAACTTGCATTTAAATGTTTTCATGAAGCTATGTCAATACTACACAAATTGCCTCTGAATGTGCACATATGATCCCTAATTATTGATGTGAAGGTTTTATAGAGGGGCCTAGGTCGATTACATCAATGAAGGTCTTAGTGCCTATCCGTGGAAGGTTTAGTTTAGCCTGATCTATGTTAAATTATTAGTGTATAGTAGGAAACTAGTATGCTATAGCTTAAAGTATTTATGAATGTTTGAGGAACTTATGAATAGTTTCTGAATCTTTACTATGTTATGTTTATAATGATTTTTACGTTTAAAGCTAAGTATTGAGCATAACTATTTGAAAATGATGTTTTTGAAAACATCATTCACTAGGCATTTTTAGCTCATTATTTCAAATGTTCTGTACTTTCCAGGTAAGGATTGTGTTTACTTGAGTTGAGCTTACCACTGCCATGCCGACCAATTTGTTAGGAGAATTTTATAAAGTTGTTATACGTAAGTAACATTGTTAGGGGTAAAGGAAACTGCTTGTATTAGACGTTTTAATTTTTGTCAAAACCTTGGTAAGTACCTTGTTTTATAAAAGCTTGAAAATAAGATGTACTTTAGATTTTTCTTTCTCTAAAAAGATAAGTTTTATGCTTTCACTGAGTTTTTAATTAAGGATTAAAGGTTTAGGGCCAACAGGTATCATTGAGGTAAAAGACAGTATCAGTTGACTTCACATAATCTCTCGAAACGAGGTATGTGGTATCAAAGCAATTTGCTTCATAGGAACTAGAAATAATTAGTTATTGGGGAATGAGAAGAAATATAAAGATAAGTCTTAAGTAATGAGTTACATGCAGACTGACAGACGACATACATAAGCAGCATATTGGATAGGATCTTACTTGAAGCTTTATAAGTAAAGTTCATTTCCTAAAAAGTTAAGCTCAACTCACTACAAGAAGAAAGGGGTATGCTGATGCAAAGATGCATCGGCAGAAGCTAGAAATGCATCAGGAGAAGCTACGTCGACAAAAAAGTAAACGTCGACAAGAACGTCACAAGAAAAGCATCATAAGAGGCTCTCTCGATGCGCTAATGACTCAGCATCGACAAAGGGTTACTACTAACGAAGTGTTCGCCGACATTGTAACGTCCAAAAAATTAAGATAATTTATTGGGCGTTATTTTGAATTCATTTAATGAGAATTATTTGATTTATGTGAGAATTGAAATTAATTAAATATTTGTTGGATGAATATTTAATTAATTAGAGGTTTTGACATGTGGTGTTTGTGGGTTTTTGATTAAATAGTAAGTTAACAGAACCAAGTAAAGTTGTGGATTTTTAGTGTTGTTGAAGTTGAAATTAATTAAATAATTATGGATGTTATTTAATTAAATTGTAGAGTAGAAAGTTTGTTGGAGATTTGATAATTATATCTATATGTGG

mRNA sequence

ACCAAAATTGTATCTTCAATTTCTACCACAAATGAAAATAAGGGAGTTAGTATTACCAGATCTCATGAGGTTCATGGAAAATTTAGTACAGATAGGACATCCTCAACTGCTGGGAAAAGTGGAAATCTCTCTCTTGATGCTTTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAACCAACTAATGCAAGAATCTATTTCAATATTGCACAAAAAGGAAAAGGCATTGCAAGAGAACAGACAACTAGCAAATAAGGTAAAGGAAAATGAGAAGGCTTTGGTTGAACGTGGACAGTGCGATGTTCCAAACTTGGTTCATAATAAACGGCCCATTTTTTGAATGACACCACCAATTCCTTCTTTATCTTTCGGGTATATTCCTCTTTCTCTCTTTCAACTGAGAAATCATTTCTCCTTATGTTAATAGATACGTATAGCCTGTATTGATTCAACTATATCATAATTTCATCGTCAATATACGAAGAAAGAAGCTGCCATTAGTTATCTTGAAGGGATAATTGAGAAACTAAGGAGTACTAAGTTGCATCGACAAAGGGTTACTACTAACGAAGTGTTCGCCGACATTGTAACGTCCAAAAAATTAAGATAATTTATTGGGCGTTATTTTGAATTCATTTAATGAGAATTATTTGATTTATGTGAGAATTGAAATTAATTAAATATTTGTTGGATGAATATTTAATTAATTAGAGGTTTTGACATGTGGTGTTTGTGGGTTTTTGATTAAATAGTAAGTTAACAGAACCAAGTAAAGTTGTGGATTTTTAGTGTTGTTGAAGTTGAAATTAATTAAATAATTATGGATGTTATTTAATTAAATTGTAGAGTAGAAAGTTTGTTGGAGATTTGATAATTATATCTATATGTGG

Coding sequence (CDS)

ACCAAAATTGTATCTTCAATTTCTACCACAAATGAAAATAAGGGAGTTAGTATTACCAGATCTCATGAGGTTCATGGAAAATTTAGTACAGATAGGACATCCTCAACTGCTGGGAAAAGTGGAAATCTCTCTCTTGATGCTTTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAACCAACTAATGCAAGAATCTATTTCAATATTGCACAAAAAGGAAAAGGCATTGCAAGAGAACAGACAACTAGCAAATAAGGTAAAGGAAAATGAGAAGGCTTTGGTTGAACGTGGACAGTGCGATGTTCCAAACTTGGTTCATAATAAACGGCCCATTTTTTGA

Protein sequence

TKIVSSISTTNENKGVSITRSHEVHGKFSTDRTSSTAGKSGNLSLDALAKAKKALQMQNQLMQESISILHKKEKALQENRQLANKVKENEKALVERGQCDVPNLVHNKRPIF
Homology
[Close]
BLAST of MELO3C030596.2 vs. NCBI nr
Match: XP_004137262.1 (PREDICTED: truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 9.3e-17
Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0 

Query: 52  KKALQMQNQLMQESISILHKKEKALQ-ENRQLANKVKENEKALVERGQCDVPNLVHNKRP 111
           K+    +NQLMQESISILHKKEK LQ ENRQLANKVKENEKALVERGQCDVPNLVHN +P
Sbjct: 138 KRIRSRKNQLMQESISILHKKEKDLQEENRQLANKVKENEKALVERGQCDVPNLVHNNQP 197

Query: 112 IF 113
           IF
Sbjct: 198 IF 199

[Close]
BLAST of MELO3C030596.2 vs. NCBI nr
Match: KGN53778.1 (hypothetical protein Csa_4G126480 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 9.3e-17
Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0 

Query: 52  KKALQMQNQLMQESISILHKKEKALQ-ENRQLANKVKENEKALVERGQCDVPNLVHNKRP 111
           K+    +NQLMQESISILHKKEK LQ ENRQLANKVKENEKALVERGQCDVPNLVHN +P
Sbjct: 76  KRIRSRKNQLMQESISILHKKEKDLQEENRQLANKVKENEKALVERGQCDVPNLVHNNQP 135

Query: 112 IF 113
           IF
Sbjct: 136 IF 137

[Close]
BLAST of MELO3C030596.2 vs. NCBI nr
Match: XP_022957013.1 (protein RDM16-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 95.9 bits (237), Expect = 9.3e-17
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 0 

Query: 4   VSSISTTNENKGVSITRSHEVHGKFSTDRTSSTAGKSGNLSLDALAKAKKALQMQNQLMQ 63
           VSSISTTNENKGVSITRSHEVHGK STD TSS+AGKSGNLSLDALAKAKKALQMQ +L +
Sbjct: 275 VSSISTTNENKGVSITRSHEVHGKSSTDGTSSSAGKSGNLSLDALAKAKKALQMQKELAE 334

Query: 64  E 65
           +
Sbjct: 335 K 335

[Close]
BLAST of MELO3C030596.2 vs. NCBI nr
Match: XP_023537630.1 (protein RDM16-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 95.5 bits (236), Expect = 1.2e-16
Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 4   VSSISTTNENKGVSITRSHEVHGKFSTDRTSSTAGKSGNLSLDALAKAKKALQMQNQLMQ 63
           VSSISTTNENKGVSITRSHEVHGK STD TSS AGKSGNLSLDALAKAKKALQMQ +L +
Sbjct: 275 VSSISTTNENKGVSITRSHEVHGKSSTDGTSSNAGKSGNLSLDALAKAKKALQMQKELAE 334

Query: 64  E 65
           +
Sbjct: 335 K 335

[Close]
BLAST of MELO3C030596.2 vs. NCBI nr
Match: XP_022941939.1 (protein RDM16-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 94.4 bits (233), Expect = 2.7e-16
Identity = 57/71 (80.28%), Postives = 61/71 (85.92%), Query Frame = 0 

Query: 4   VSSISTTNENKGVSITRSHEVHGKFSTDRTSSTAGKSGNLSLDALAKAKKALQMQNQLMQ 63
           VSSISTTNENKGVSI RSHEVHGK STD TSSTAGKSGNLSLDALAKAKKALQMQ +L +
Sbjct: 291 VSSISTTNENKGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAE 350

Query: 64  ESISI-LHKKE 74
           +   I L KK+
Sbjct: 351 KLKKIPLMKKD 361

[Close]
BLAST of MELO3C030596.2 vs. TAIR10
Match: AT1G28060.1 (Pre-mRNA-splicing factor 3)

HSP 1 Score: 52.0 bits (123), Expect = 2.8e-07
Identity = 45/82 (54.88%), Postives = 54/82 (65.85%), Query Frame = 0 

Query: 4   VSSISTTNENKGVSITRSHEVHGKFSTD-RTSSTAGK-SGNLSLDA---LAKAKKALQMQ 63
           VSSISTT+ENK  S+ RSHEV GK STD R  STAGK S NL LD+    AKA+KALQ+Q
Sbjct: 183 VSSISTTDENK-ASVVRSHEVPGKSSTDGRPLSTAGKSSANLPLDSSALAAKARKALQLQ 242

Query: 64  NQLMQ--ESISILHKKEKALQE 79
             L    +++ +L K  K   E
Sbjct: 243 KGLADRLKNLPLLKKATKPTSE 263

[Close]
BLAST of MELO3C030596.2 vs. TAIR10
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 42.0 bits (97), Expect = 2.9e-04
Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 0 

Query: 58  QNQLMQESISILHKKEKALQE-NRQLANKVKENEKAL-VERGQCDVPNLVHNKRP 111
           +NQLM ESI+ L KKEKA+QE N  L+ ++KE EK L  ++ Q D  N  HN  P
Sbjct: 143 KNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNQGHNMPP 197

[Close]
BLAST of MELO3C030596.2 vs. Swiss-Prot
Match: sp|Q9C7E7|RDM16_ARATH (Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 5.0e-06
Identity = 45/82 (54.88%), Postives = 54/82 (65.85%), Query Frame = 0 

Query: 4   VSSISTTNENKGVSITRSHEVHGKFSTD-RTSSTAGK-SGNLSLDA---LAKAKKALQMQ 63
           VSSISTT+ENK  S+ RSHEV GK STD R  STAGK S NL LD+    AKA+KALQ+Q
Sbjct: 183 VSSISTTDENK-ASVVRSHEVPGKSSTDGRPLSTAGKSSANLPLDSSALAAKARKALQLQ 242

Query: 64  NQLMQ--ESISILHKKEKALQE 79
             L    +++ +L K  K   E
Sbjct: 243 KGLADRLKNLPLLKKATKPTSE 263

[Close]
BLAST of MELO3C030596.2 vs. TrEMBL
Match: tr|A0A0A0KW39|A0A0A0KW39_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G126480 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.1e-17
Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = 0 

Query: 52  KKALQMQNQLMQESISILHKKEKALQ-ENRQLANKVKENEKALVERGQCDVPNLVHNKRP 111
           K+    +NQLMQESISILHKKEK LQ ENRQLANKVKENEKALVERGQCDVPNLVHN +P
Sbjct: 76  KRIRSRKNQLMQESISILHKKEKDLQEENRQLANKVKENEKALVERGQCDVPNLVHNNQP 135

Query: 112 IF 113
           IF
Sbjct: 136 IF 137

[Close]
BLAST of MELO3C030596.2 vs. TrEMBL
Match: tr|A0A1S3CF39|A0A1S3CF39_CUCME (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo OX=3656 GN=LOC103500170 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.3e-16
Identity = 61/89 (68.54%), Postives = 68/89 (76.40%), Query Frame = 0 

Query: 4   VSSISTTNENKGVSITRSHEVHGKFSTDRTSSTAGKSGNLSLDALAKAKKALQMQNQLMQ 63
           VSSISTTNENKGVSITRSHEVHGK STD TSSTAGKSGNLSLDALAKAKKALQMQ +L  
Sbjct: 299 VSSISTTNENKGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKEL-A 358

Query: 64  ESISILHKKEKALQENRQLANKVKENEKA 93
           E +  +   +K    +   ++ VK  EKA
Sbjct: 359 EKLKKIPLMKKVGGSSSANSSVVKLEEKA 386

[Close]
BLAST of MELO3C030596.2 vs. TrEMBL
Match: tr|V4SNK1|V4SNK1_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10030694mg PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.0e-16
Identity = 52/61 (85.25%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 4   VSSISTTNENKGVSITRSHEVHGKFSTDRTSSTAGKSGNLSLDALAKAKKALQMQNQLMQ 63
           VSSISTTNENKGVSITRSHEVHGK STD TSS AGKSG+LSLDALAKAKKALQMQ +L +
Sbjct: 249 VSSISTTNENKGVSITRSHEVHGKSSTDGTSSAAGKSGSLSLDALAKAKKALQMQKELSE 308

Query: 64  E 65
           +
Sbjct: 309 K 309

[Close]
BLAST of MELO3C030596.2 vs. TrEMBL
Match: tr|A0A2H5NZD4|A0A2H5NZD4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_088920 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.0e-16
Identity = 52/61 (85.25%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 4   VSSISTTNENKGVSITRSHEVHGKFSTDRTSSTAGKSGNLSLDALAKAKKALQMQNQLMQ 63
           VSSISTTNENKGVSITRSHEVHGK STD TSS AGKSG+LSLDALAKAKKALQMQ +L +
Sbjct: 249 VSSISTTNENKGVSITRSHEVHGKSSTDGTSSAAGKSGSLSLDALAKAKKALQMQKELSE 308

Query: 64  E 65
           +
Sbjct: 309 K 309

[Close]
BLAST of MELO3C030596.2 vs. TrEMBL
Match: tr|A0A067FNX0|A0A067FNX0_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g003362mg PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.0e-16
Identity = 52/61 (85.25%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 4   VSSISTTNENKGVSITRSHEVHGKFSTDRTSSTAGKSGNLSLDALAKAKKALQMQNQLMQ 63
           VSSISTTNENKGVSITRSHEVHGK STD TSS AGKSG+LSLDALAKAKKALQMQ +L +
Sbjct: 223 VSSISTTNENKGVSITRSHEVHGKSSTDGTSSAAGKSGSLSLDALAKAKKALQMQKELSE 282

Query: 64  E 65
           +
Sbjct: 283 K 283

The following BLAST results are available for this feature:
BLAST of MELO3C030596.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004137262.19.3e-1783.87PREDICTED: truncated transcription factor CAULIFLOWER A isoform X1 [Cucumis sati... [more]
KGN53778.19.3e-1783.87hypothetical protein Csa_4G126480 [Cucumis sativus][more]
XP_022957013.19.3e-1786.89protein RDM16-like isoform X1 [Cucurbita moschata][more]
XP_023537630.11.2e-1686.89protein RDM16-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022941939.12.7e-1680.28protein RDM16-like isoform X1 [Cucurbita moschata][more]
BLAST of MELO3C030596.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G28060.12.8e-0754.88Pre-mRNA-splicing factor 3[more]
AT1G69120.12.9e-0450.91K-box region and MADS-box transcription factor family protein [more]
BLAST of MELO3C030596.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9C7E7|RDM16_ARATH5.0e-0654.88Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1[more]
BLAST of MELO3C030596.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KW39|A0A0A0KW39_CUCSA6.1e-1783.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G126480 PE=4 SV=1[more]
tr|A0A1S3CF39|A0A1S3CF39_CUCME2.3e-1668.54U4/U6 small nuclear ribonucleoprotein Prp3 OS=Cucumis melo OX=3656 GN=LOC1035001... [more]
tr|V4SNK1|V4SNK1_9ROSI3.0e-1685.25Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10030694mg PE=4 ... [more]
tr|A0A2H5NZD4|A0A2H5NZD4_CITUN3.0e-1685.25Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_088920 PE=4 SV=1[more]
tr|A0A067FNX0|A0A067FNX0_CITSI3.0e-1685.25Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g003362mg PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030596.2.1MELO3C030596.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 45..65
NoneNo IPR availableCOILSCoilCoilcoord: 69..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C030596.2Wax gourdmedwgoB394
MELO3C030596.2Cucumber (Gy14) v2cgybmedB176
MELO3C030596.2Cucurbita maxima (Rimu)cmamedB258
MELO3C030596.2Cucumber (Gy14) v1cgymedB250
MELO3C030596.2Cucurbita moschata (Rifu)cmomedB240
MELO3C030596.2Cucurbita pepo (Zucchini)cpemedB618
MELO3C030596.2Cucurbita pepo (Zucchini)cpemedB674
MELO3C030596.2Wild cucumber (PI 183967)cpimedB196
MELO3C030596.2Cucumber (Chinese Long) v2cumedB195
MELO3C030596.2Watermelon (Charleston Gray)medwcgB343
MELO3C030596.2Watermelon (97103) v1medwmB356
MELO3C030596.2Silver-seed gourdcarmedB0210
MELO3C030596.2Cucumber (Chinese Long) v3cucmedB201
MELO3C030596.2Watermelon (97103) v2medwmbB338