MELO3C030318.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C030318.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionHepatocyte growth factor-regulated tyrosine kinase substrate
Locationchr03 : 28389486 .. 28389860 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCGACAACAGCATTATAAATCAATCCTACACTTTGCATTGAGAAACCGAAGGATCAAGTTTACAAACACAAATCTGGTAAAGTTGGTATGGGCACAATACTGTGTTGACTTCCCCTCTCTATTTCCGCTCACACTCAACAAAGAAGCATCCATATCTGATTTATGGTCCACTGAAAATGCCTATTGGAACCTATATCTAGGAAGAGGTCTTAAAGAAGATGAAATCAAGGAATGGGCTTGCCTATCCAACCTGCTATCCTCAGTCATCCTCACTAACCAAGAAGACACGTGGGTTTGTAACATTGATAAGGATGGTATATTCACCTCAAAGTCATTGAGAAGAGCTCTTGCTATAGCTACAAACAAATAG

mRNA sequence

ATGATGCGACAACAGCATTATAAATCAATCCTACACTTTGCATTGAGAAACCGAAGGATCAAGTTTACAAACACAAATCTGGTAAAGTTGGTATGGGCACAATACTGTGTTGACTTCCCCTCTCTATTTCCGCTCACACTCAACAAAGAAGCATCCATATCTGATTTATGGTCCACTGAAAATGCCTATTGGAACCTATATCTAGGAAGAGGTCTTAAAGAAGATGAAATCAAGGAATGGGCTTGCCTATCCAACCTGCTATCCTCAGTCATCCTCACTAACCAAGAAGACACGTGGGTTTGTAACATTGATAAGGATGGTATATTCACCTCAAAGTCATTGAGAAGAGCTCTTGCTATAGCTACAAACAAATAG

Coding sequence (CDS)

ATGATGCGACAACAGCATTATAAATCAATCCTACACTTTGCATTGAGAAACCGAAGGATCAAGTTTACAAACACAAATCTGGTAAAGTTGGTATGGGCACAATACTGTGTTGACTTCCCCTCTCTATTTCCGCTCACACTCAACAAAGAAGCATCCATATCTGATTTATGGTCCACTGAAAATGCCTATTGGAACCTATATCTAGGAAGAGGTCTTAAAGAAGATGAAATCAAGGAATGGGCTTGCCTATCCAACCTGCTATCCTCAGTCATCCTCACTAACCAAGAAGACACGTGGGTTTGTAACATTGATAAGGATGGTATATTCACCTCAAAGTCATTGAGAAGAGCTCTTGCTATAGCTACAAACAAATAG

Protein sequence

MMRQQHYKSILHFALRNRRIKFTNTNLVKLVWAQYCVDFPSLFPLTLNKEASISDLWSTENAYWNLYLGRGLKEDEIKEWACLSNLLSSVILTNQEDTWVCNIDKDGIFTSKSLRRALAIATNK
Homology
[Close]
BLAST of MELO3C030318.2 vs. NCBI nr
Match: EAZ20332.1 (hypothetical protein OsJ_35941 [Oryza sativa Japonica Group])

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 28/79 (35.44%), Postives = 45/79 (56.96%), Query Frame = 0 

Query: 40  PSLFPLTLNKEASISDLWSTENAYWNLYLGRGLKEDEIKEWACLSNLLSSVILTNQEDTW 99
           P ++ +  +KE S+   W+     WN++L R L   E++EW  L   L  V LTN+ D  
Sbjct: 60  PYIYSICADKEMSVRQSWN--EGSWNIHLRRSLGVRELEEWNDLLTKLGQVALTNERDIM 119

Query: 100 VCNIDKDGIFTSKSLRRAL 119
           +  ++K GI+T +SL RA+
Sbjct: 120 IWKLNKSGIYTPRSLCRAI 136

[Close]
BLAST of MELO3C030318.2 vs. NCBI nr
Match: ABA97687.1 (retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group])

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-05
Identity = 28/79 (35.44%), Postives = 45/79 (56.96%), Query Frame = 0 

Query: 40   PSLFPLTLNKEASISDLWSTENAYWNLYLGRGLKEDEIKEWACLSNLLSSVILTNQEDTW 99
            P ++ +  +KE S+   W+     WN++L R L   E++EW  L   L  V LTN+ D  
Sbjct: 978  PYIYSICADKEMSVRQSWN--EGSWNIHLRRSLGVRELEEWNDLLTKLGQVALTNERDIM 1037

Query: 100  VCNIDKDGIFTSKSLRRAL 119
            +  ++K GI+T +SL RA+
Sbjct: 1038 IWKLNKSGIYTPRSLCRAI 1054

[Close]
BLAST of MELO3C030318.2 vs. NCBI nr
Match: KGN44355.1 (hypothetical protein Csa_7G268520 [Cucumis sativus])

HSP 1 Score: 58.5 bits (140), Expect = 1.8e-05
Identity = 30/71 (42.25%), Postives = 44/71 (61.97%), Query Frame = 0 

Query: 48  NKEASISDLWSTENAYWNLYLGRGLKEDEIKEWACLSNLLSSVILTNQEDTWVCNIDKDG 107
           N  A++S+ W  E+  WN+   R LKE+E ++W  L+NLLS+V  T   D W  N+DK+G
Sbjct: 43  NNLATVSNSWEDEHG-WNISYRRNLKEEEFEDWLTLTNLLSTVNPT--RDKWTWNVDKNG 102

Query: 108 IFTSKSLRRAL 119
            F+  SL  A+
Sbjct: 103 NFSFYSLLDAI 110

[Close]
BLAST of MELO3C030318.2 vs. NCBI nr
Match: PVH47915.1 (hypothetical protein PAHAL_4G185500 [Panicum hallii])

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-05
Identity = 31/89 (34.83%), Postives = 50/89 (56.18%), Query Frame = 0 

Query: 31  VWAQYC---VDFPSLFPLTLNKEASISDLWSTENAYWNLYLGRGLKEDEIKEWACLSNLL 90
           VW+  C   V FP LF ++ ++  S+++  + E   W L   R L   E++EWA L   L
Sbjct: 88  VWSGGCSFMVKFPHLFKISSDQAISVAEAGNVE---WRLQFRRNLGRVELEEWATLQQEL 147

Query: 91  SSVILTNQEDTWVCNIDKDGIFTSKSLRR 117
           S + LT+ ED     ++K GI++++SL R
Sbjct: 148 SQISLTDSEDAAKWGLEKKGIYSTRSLYR 173

[Close]
BLAST of MELO3C030318.2 vs. NCBI nr
Match: XP_016902461.1 (PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo])

HSP 1 Score: 56.2 bits (134), Expect = 9.0e-05
Identity = 27/80 (33.75%), Postives = 47/80 (58.75%), Query Frame = 0 

Query: 39  FPSLFPLTLNKEASISDLWSTENAYWNLYLGRGLKEDEIKEWACLSNLLSSVILTNQEDT 98
           +P L+ L+ NKE+SI D+W+     W+L   R L+E E   WA L N L++    N  D+
Sbjct: 794 YPRLYALSTNKESSIRDMWNNTLMDWDLNPRRQLREWEHPLWAELKNSLNASFCENGNDS 853

Query: 99  WVCNIDKDGIFTSKSLRRAL 119
            +  ++ +G++T  S+++ L
Sbjct: 854 PMWTLNSNGLYTVASVKKTL 873

[Close]
BLAST of MELO3C030318.2 vs. TrEMBL
Match: tr|Q2QSD3|Q2QSD3_ORYSJ (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g24510 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.0e-06
Identity = 28/79 (35.44%), Postives = 45/79 (56.96%), Query Frame = 0 

Query: 40   PSLFPLTLNKEASISDLWSTENAYWNLYLGRGLKEDEIKEWACLSNLLSSVILTNQEDTW 99
            P ++ +  +KE S+   W+     WN++L R L   E++EW  L   L  V LTN+ D  
Sbjct: 978  PYIYSICADKEMSVRQSWN--EGSWNIHLRRSLGVRELEEWNDLLTKLGQVALTNERDIM 1037

Query: 100  VCNIDKDGIFTSKSLRRAL 119
            +  ++K GI+T +SL RA+
Sbjct: 1038 IWKLNKSGIYTPRSLCRAI 1054

[Close]
BLAST of MELO3C030318.2 vs. TrEMBL
Match: tr|A3CGW9|A3CGW9_ORYSJ (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_35941 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.0e-06
Identity = 28/79 (35.44%), Postives = 45/79 (56.96%), Query Frame = 0 

Query: 40  PSLFPLTLNKEASISDLWSTENAYWNLYLGRGLKEDEIKEWACLSNLLSSVILTNQEDTW 99
           P ++ +  +KE S+   W+     WN++L R L   E++EW  L   L  V LTN+ D  
Sbjct: 60  PYIYSICADKEMSVRQSWN--EGSWNIHLRRSLGVRELEEWNDLLTKLGQVALTNERDIM 119

Query: 100 VCNIDKDGIFTSKSLRRAL 119
           +  ++K GI+T +SL RA+
Sbjct: 120 IWKLNKSGIYTPRSLCRAI 136

[Close]
BLAST of MELO3C030318.2 vs. TrEMBL
Match: tr|A0A0A0K3T0|A0A0A0K3T0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G268520 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-05
Identity = 30/71 (42.25%), Postives = 44/71 (61.97%), Query Frame = 0 

Query: 48  NKEASISDLWSTENAYWNLYLGRGLKEDEIKEWACLSNLLSSVILTNQEDTWVCNIDKDG 107
           N  A++S+ W  E+  WN+   R LKE+E ++W  L+NLLS+V  T   D W  N+DK+G
Sbjct: 43  NNLATVSNSWEDEHG-WNISYRRNLKEEEFEDWLTLTNLLSTVNPT--RDKWTWNVDKNG 102

Query: 108 IFTSKSLRRAL 119
            F+  SL  A+
Sbjct: 103 NFSFYSLLDAI 110

[Close]
BLAST of MELO3C030318.2 vs. TrEMBL
Match: tr|A0A2T8JDE2|A0A2T8JDE2_9POAL (Uncharacterized protein OS=Panicum hallii OX=206008 GN=PAHAL_4G185500 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.6e-05
Identity = 31/89 (34.83%), Postives = 50/89 (56.18%), Query Frame = 0 

Query: 31  VWAQYC---VDFPSLFPLTLNKEASISDLWSTENAYWNLYLGRGLKEDEIKEWACLSNLL 90
           VW+  C   V FP LF ++ ++  S+++  + E   W L   R L   E++EWA L   L
Sbjct: 88  VWSGGCSFMVKFPHLFKISSDQAISVAEAGNVE---WRLQFRRNLGRVELEEWATLQQEL 147

Query: 91  SSVILTNQEDTWVCNIDKDGIFTSKSLRR 117
           S + LT+ ED     ++K GI++++SL R
Sbjct: 148 SQISLTDSEDAAKWGLEKKGIYSTRSLYR 173

[Close]
BLAST of MELO3C030318.2 vs. TrEMBL
Match: tr|A0A1S4E2K5|A0A1S4E2K5_CUCME (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo OX=3656 GN=LOC107991687 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 6.0e-05
Identity = 27/80 (33.75%), Postives = 47/80 (58.75%), Query Frame = 0 

Query: 39  FPSLFPLTLNKEASISDLWSTENAYWNLYLGRGLKEDEIKEWACLSNLLSSVILTNQEDT 98
           +P L+ L+ NKE+SI D+W+     W+L   R L+E E   WA L N L++    N  D+
Sbjct: 794 YPRLYALSTNKESSIRDMWNNTLMDWDLNPRRQLREWEHPLWAELKNSLNASFCENGNDS 853

Query: 99  WVCNIDKDGIFTSKSLRRAL 119
            +  ++ +G++T  S+++ L
Sbjct: 854 PMWTLNSNGLYTVASVKKTL 873

The following BLAST results are available for this feature:
BLAST of MELO3C030318.2 vs. NCBI nr
Match NameE-valueIdentityDescription
EAZ20332.11.1e-0535.44hypothetical protein OsJ_35941 [Oryza sativa Japonica Group][more]
ABA97687.11.1e-0535.44retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group][more]
KGN44355.11.8e-0542.25hypothetical protein Csa_7G268520 [Cucumis sativus][more]
PVH47915.12.4e-0534.83hypothetical protein PAHAL_4G185500 [Panicum hallii][more]
XP_016902461.19.0e-0533.75PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo][more]
BLAST of MELO3C030318.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C030318.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C030318.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|Q2QSD3|Q2QSD3_ORYSJ7.0e-0635.44Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica ... [more]
tr|A3CGW9|A3CGW9_ORYSJ7.0e-0635.44Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_35941 PE... [more]
tr|A0A0A0K3T0|A0A0A0K3T0_CUCSA1.2e-0542.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G268520 PE=4 SV=1[more]
tr|A0A2T8JDE2|A0A2T8JDE2_9POAL1.6e-0534.83Uncharacterized protein OS=Panicum hallii OX=206008 GN=PAHAL_4G185500 PE=4 SV=1[more]
tr|A0A1S4E2K5|A0A1S4E2K5_CUCME6.0e-0533.75LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo OX=3656 GN=LOC1079... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0016310 phosphorylation
cellular_component GO:0005622 intracellular
molecular_function GO:0016301 kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030318.2.1MELO3C030318.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C030318.2Cucumber (Gy14) v2cgybmedB101
MELO3C030318.2Cucumber (Gy14) v1cgymedB273
MELO3C030318.2Cucumber (Gy14) v1cgymedB516
MELO3C030318.2Cucurbita maxima (Rimu)cmamedB177
MELO3C030318.2Cucurbita maxima (Rimu)cmamedB822
MELO3C030318.2Cucurbita moschata (Rifu)cmomedB167
MELO3C030318.2Cucurbita moschata (Rifu)cmomedB816
MELO3C030318.2Cucurbita pepo (Zucchini)cpemedB116
MELO3C030318.2Cucurbita pepo (Zucchini)cpemedB897
MELO3C030318.2Wild cucumber (PI 183967)cpimedB114
MELO3C030318.2Cucumber (Chinese Long) v2cumedB114
MELO3C030318.2Melon (DHL92) v3.6.1medmedB119
MELO3C030318.2Bottle gourd (USVL1VR-Ls)lsimedB320
MELO3C030318.2Bottle gourd (USVL1VR-Ls)lsimedB493
MELO3C030318.2Watermelon (Charleston Gray)medwcgB267
MELO3C030318.2Watermelon (Charleston Gray)medwcgB292
MELO3C030318.2Watermelon (97103) v1medwmB300
MELO3C030318.2Watermelon (97103) v1medwmB333
MELO3C030318.2Silver-seed gourdcarmedB0059
MELO3C030318.2Silver-seed gourdcarmedB0961
MELO3C030318.2Cucumber (Chinese Long) v3cucmedB118
MELO3C030318.2Cucumber (Chinese Long) v3cucmedB197
MELO3C030318.2Watermelon (97103) v2medwmbB271
MELO3C030318.2Watermelon (97103) v2medwmbB293
MELO3C030318.2Wax gourdmedwgoB323