MELO3C030161.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C030161.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUlp1 protease family, carboxy-terminal domain protein
Locationchr03 : 14159037 .. 14161488 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCATACAATTCAGGGTATGTACAAAACTTTTTTTAGCTAATGCACCTAATGAACTATATGACCTTCATTCTAAGTTTAACTCACATTTACCTGTCAATATAGAAACCATTGGTGTCTAATAGCCATCGATTTTTCAAGGGACACTGCATATTGGATGGATCCTTTGAGAAACCGAATTAACAATGATGCCTCTGATGTCGTCCGGATGTATGTTGGAACTTTTATTCATGATAAAACAATAATGAGTTAATATGTTGCATATGAGACAATGATTGTATAACTTACGTAGTTTGATATGCATTCTTAGGGCTTTCGGCATTTCGAACAAGAAGAAGCCTGTTTGGAGGATAATCAAGGTATGAGGAGTAGGGATTTAGTAGAAGACAGAGGTAAACATACTTTATGTTTTGCAACTGTAACATGGGTATTTTGTTCTTCTTTTTCTCTGATGGATAGTGTCCGAAGCAAGGTGGCATTGTGGAGTGCAGGTATTATGTGATGCGATTCATGCGTGATATAATATTGTCAAGCAACAGGACAATCATCGAAGTAGTAAGTATTTCATTTTACCTTTTTGAACTACTTATGTTATTTACAACTGTTGCATATTAAATCATTTTTAAATGATGAATAGATGGAAGGATCAACCTCGACATACTCACAGGACGATTTAGATGTCGTAAGAATGGAGTGGGCTGAATTCGTAAACCAATATATTTTCTGTTCCCAATCTCAAAGGTAAAATTTGTAAACGAGACAACTTTATATGCTTTTTCGTGTGGATTTGATTACAACACGTGTTATTGCGTTGACTATCCTGCAGTTATGGTAGTCATTGAAATGCTCTTTTGTTCGATCCTTTTAGACATATGTTTTACGAATCATGTTGACATGTACTTTGGATCTCTGTTCATAGTTGTGTTGACTATCTTGTAGTTATGGTAGTCATTGATAAGCTAGCTATTTTGTTCAATCTGCTTACACATGTTTTAGAAACCATGTTGACATTTTTTTGTTTTGTTCATTTCTCGTTGACTTCGTAGCATAGGTGTTTGTGGAATGGAGGAGGTAAGTCTATGTTTAGGTTTATTAATGACCTTGGAAGTGAGGAGCAGGGCGGTGGGAGTGCTAAGTTCATGTTTAATCTCAACTTTGACTTTAGAAGGGGTGAGGGAGTGGGGAATTGGAGGGGGGGGGAAGATACCTTTATGTTTAATAATGACCTTGGAAGGAGGGAGTGAGTTGCTAAGTTTAGAAATGACGTTGGGGGGGGGGGGGGGTTGGGACGTAGGGGTACAGTTATGCTTAAGTTGTTCTTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACATTTATGCTTAAGTTGTTCTTTGATGCAAACTAAAACGTTGCTGGGTCTGTAAAGAATAAATCAAAACAAATTATTGCATTACTTATATATTATGCTTATGGTTATGAAGTCGGTGTTTTTATTTCTCTTTTGCATCCCTTATGAATCTTTAACTAAGAAACTTGGTTGTATGACTTGGATGGGAGGGGAGTGATACATTTATTTTTAATAATGACCTTGGAAGGAGTGAGTGAGATGCTAAGTTAATGTTTAAGTTTATAAATGACTTTGGGGGGGGGGCTAAGGATACGTGTATGCTTAAGTTTTAACTTTAAATCAGAATATTGTTAGGTCTGTAAAGATTGAATTGAAACTTATTTTTGCAACCATGTTTATGCTTATGTAGTCGGTGTTTTTCTTTTATCTTTTGTGTTCTTTATGGGTCTTTTATAAAGAACCTTGGTCGTATGAACTTTGGACGTTTATGTTAAAAAGTTCCTATTTGGAATGTACTTAATGTTTATGCTTATGCTTATGCATTTTCCGTAATGAAAGTTGGCTAAGGTTCATTTTCTTCAATTTTGTAGGTAGTTGA

mRNA sequence

ATGTTTCCATACAATTCAGGAAACCATTGGTGTCTAATAGCCATCGATTTTTCAAGGGACACTGCATATTGGATGGATCCTTTGAGAAACCGAATTAACAATGATGCCTCTGATGTCGTCCGGATGGCTTTCGGCATTTCGAACAAGAAGAAGCCTGTTTGGAGGATAATCAAGTGTCCGAAGCAAGGTGGCATTGTGGAGTGCAGGTATTATGTGATGCGATTCATGCGTGATATAATATTGTCAAGCAACAGGACAATCATCGAAGTAATGGAAGGATCAACCTCGACATACTCACAGGACGATTTAGATGTCGTAAGAATGGAGTGGGCTGAATTCGTAAACCAATATATTTTCTGTTCCCAATCTCAAAGGTGTTTGTGGAATGGAGGAGGTAAGTCTATGTTTAGGTTTATTAATGACCTTGGAAGTGAGGAGCAGGGCGGTGGGAGTGCTAAGTTCATGTTTAATCTCAACTTTGACTTTAGAAGGGGTAGTTGA

Coding sequence (CDS)

ATGTTTCCATACAATTCAGGAAACCATTGGTGTCTAATAGCCATCGATTTTTCAAGGGACACTGCATATTGGATGGATCCTTTGAGAAACCGAATTAACAATGATGCCTCTGATGTCGTCCGGATGGCTTTCGGCATTTCGAACAAGAAGAAGCCTGTTTGGAGGATAATCAAGTGTCCGAAGCAAGGTGGCATTGTGGAGTGCAGGTATTATGTGATGCGATTCATGCGTGATATAATATTGTCAAGCAACAGGACAATCATCGAAGTAATGGAAGGATCAACCTCGACATACTCACAGGACGATTTAGATGTCGTAAGAATGGAGTGGGCTGAATTCGTAAACCAATATATTTTCTGTTCCCAATCTCAAAGGTGTTTGTGGAATGGAGGAGGTAAGTCTATGTTTAGGTTTATTAATGACCTTGGAAGTGAGGAGCAGGGCGGTGGGAGTGCTAAGTTCATGTTTAATCTCAACTTTGACTTTAGAAGGGGTAGTTGA

Protein sequence

MFPYNSGNHWCLIAIDFSRDTAYWMDPLRNRINNDASDVVRMAFGISNKKKPVWRIIKCPKQGGIVECRYYVMRFMRDIILSSNRTIIEVMEGSTSTYSQDDLDVVRMEWAEFVNQYIFCSQSQRCLWNGGGKSMFRFINDLGSEEQGGGSAKFMFNLNFDFRRGS
Homology
[Close]
BLAST of MELO3C030161.2 vs. NCBI nr
Match: XP_016902600.1 (PREDICTED: uncharacterized protein LOC107991758 [Cucumis melo])

HSP 1 Score: 119.0 bits (297), Expect = 1.5e-23
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0 

Query: 1   MFPYNSGNHWCLIAIDFSRDTAYWMDPLRNRINNDASDVVRMAFGISNKKKPVWRIIK 59
           MFPYNSGNHWCLIAIDFSR TAYWMDPLRNRINNDASDVV MAF ISNKKK VWRIIK
Sbjct: 64  MFPYNSGNHWCLIAIDFSRGTAYWMDPLRNRINNDASDVVWMAFDISNKKKLVWRIIK 121

[Close]
BLAST of MELO3C030161.2 vs. NCBI nr
Match: XP_022156946.1 (uncharacterized protein LOC111023778 [Momordica charantia])

HSP 1 Score: 116.3 bits (290), Expect = 9.8e-23
Identity = 51/109 (46.79%), Postives = 72/109 (66.06%), Query Frame = 0 

Query: 10  WCLIAIDFSRDTAYWMDPLRNRINNDASDVVRMAFGISNKKKPVWRIIKCPKQGGIVECR 69
           W LI I +S+   Y ++PLRNR++ND  DVV  A    NK K  W+ +KCP+Q G  EC 
Sbjct: 6   WILIVIXYSKTMVYSINPLRNRLDNDIMDVVNRALNKCNKVKVHWKCVKCPRQPGSTECG 65

Query: 70  YYVMRFMRDIILSSNRTIIEVMEGSTSTYSQDDLDVVRMEWAEFVNQYI 119
           YYVM+FMR I+   + +I +VM+     Y++DD++V+RMEW EFV  Y+
Sbjct: 66  YYVMQFMRAIVNQQSTSITDVMKLEPKEYTKDDINVLRMEWVEFVGSYL 114

[Close]
BLAST of MELO3C030161.2 vs. NCBI nr
Match: PRQ21563.1 (putative Ulp1 protease family catalytic domain-containing protein [Rosa chinensis])

HSP 1 Score: 115.5 bits (288), Expect = 1.7e-22
Identity = 56/124 (45.16%), Postives = 81/124 (65.32%), Query Frame = 0 

Query: 3   PYNSGNHWCLIAIDFSRDTAYWMDPLRN-RINNDASDVVRMAF-------GISNKKKPVW 62
           PYN+GNHW L AI+      Y+ DPL N  IN    ++V +A        G  N+KK  W
Sbjct: 469 PYNTGNHWLLAAINPFTALVYYFDPLGNTNINPGMKNIVELAIKMFNAQKGRKNRKKVHW 528

Query: 63  RIIKCPKQGGIVECRYYVMRFMRDIILSSNRTIIEVMEGSTSTYSQDDLDVVRMEWAEFV 119
            ++KCP+Q G VEC YYVM++M++II + + +I+ + EG   TY+Q+++DVVR+EWAE V
Sbjct: 529 EVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILNMFEGK-ETYTQEEIDVVRVEWAEQV 588

[Close]
BLAST of MELO3C030161.2 vs. NCBI nr
Match: PRQ44716.1 (putative Ulp1 protease family catalytic domain-containing protein [Rosa chinensis])

HSP 1 Score: 115.5 bits (288), Expect = 1.7e-22
Identity = 56/124 (45.16%), Postives = 81/124 (65.32%), Query Frame = 0 

Query: 3   PYNSGNHWCLIAIDFSRDTAYWMDPLRN-RINNDASDVVRMAF-------GISNKKKPVW 62
           PYN+GNHW L AI+      Y+ DPL N  IN    ++V +A        G  N+KK  W
Sbjct: 358 PYNTGNHWLLAAINPFTALVYYFDPLGNTNINPGMKNIVELAIKMFNAQKGRKNRKKVHW 417

Query: 63  RIIKCPKQGGIVECRYYVMRFMRDIILSSNRTIIEVMEGSTSTYSQDDLDVVRMEWAEFV 119
            ++KCP+Q G VEC YYVM++M++II + + +I+ + EG   TY+Q+++DVVR+EWAE V
Sbjct: 418 EVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILNMFEGK-ETYTQEEIDVVRVEWAEQV 477

[Close]
BLAST of MELO3C030161.2 vs. NCBI nr
Match: XP_024186978.1 (uncharacterized protein LOC112191799 [Rosa chinensis])

HSP 1 Score: 115.5 bits (288), Expect = 1.7e-22
Identity = 56/124 (45.16%), Postives = 81/124 (65.32%), Query Frame = 0 

Query: 3   PYNSGNHWCLIAIDFSRDTAYWMDPLRN-RINNDASDVVRMAF-------GISNKKKPVW 62
           PYN+GNHW L AI+      Y+ DPL N  IN    ++V +A        G  N+KK  W
Sbjct: 56  PYNTGNHWLLAAINPFTALVYYFDPLGNTNINPGMKNIVELAIKMFNAQKGRKNRKKVHW 115

Query: 63  RIIKCPKQGGIVECRYYVMRFMRDIILSSNRTIIEVMEGSTSTYSQDDLDVVRMEWAEFV 119
            ++KCP+Q G VEC YYVM++M++II + + +I+ + EG   TY+Q+++DVVR+EWAE V
Sbjct: 116 EVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILNMFEGK-ETYTQEEIDVVRVEWAEQV 175

[Close]
BLAST of MELO3C030161.2 vs. TrEMBL
Match: tr|A0A1S4E3P6|A0A1S4E3P6_CUCME (uncharacterized protein LOC107991758 OS=Cucumis melo OX=3656 GN=LOC107991758 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.0e-23
Identity = 54/58 (93.10%), Postives = 54/58 (93.10%), Query Frame = 0 

Query: 1   MFPYNSGNHWCLIAIDFSRDTAYWMDPLRNRINNDASDVVRMAFGISNKKKPVWRIIK 59
           MFPYNSGNHWCLIAIDFSR TAYWMDPLRNRINNDASDVV MAF ISNKKK VWRIIK
Sbjct: 64  MFPYNSGNHWCLIAIDFSRGTAYWMDPLRNRINNDASDVVWMAFDISNKKKLVWRIIK 121

[Close]
BLAST of MELO3C030161.2 vs. TrEMBL
Match: tr|A0A2P6PI11|A0A2P6PI11_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0240601 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-22
Identity = 56/124 (45.16%), Postives = 81/124 (65.32%), Query Frame = 0 

Query: 3   PYNSGNHWCLIAIDFSRDTAYWMDPLRN-RINNDASDVVRMAF-------GISNKKKPVW 62
           PYN+GNHW L AI+      Y+ DPL N  IN    ++V +A        G  N+KK  W
Sbjct: 469 PYNTGNHWLLAAINPFTALVYYFDPLGNTNINPGMKNIVELAIKMFNAQKGRKNRKKVHW 528

Query: 63  RIIKCPKQGGIVECRYYVMRFMRDIILSSNRTIIEVMEGSTSTYSQDDLDVVRMEWAEFV 119
            ++KCP+Q G VEC YYVM++M++II + + +I+ + EG   TY+Q+++DVVR+EWAE V
Sbjct: 529 EVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILNMFEGK-ETYTQEEIDVVRVEWAEQV 588

[Close]
BLAST of MELO3C030161.2 vs. TrEMBL
Match: tr|A0A2P6RE63|A0A2P6RE63_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0482291 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-22
Identity = 56/124 (45.16%), Postives = 81/124 (65.32%), Query Frame = 0 

Query: 3   PYNSGNHWCLIAIDFSRDTAYWMDPLRN-RINNDASDVVRMAF-------GISNKKKPVW 62
           PYN+GNHW L AI+      Y+ DPL N  IN    ++V +A        G  N+KK  W
Sbjct: 358 PYNTGNHWLLAAINPFTALVYYFDPLGNTNINPGMKNIVELAIKMFNAQKGRKNRKKVHW 417

Query: 63  RIIKCPKQGGIVECRYYVMRFMRDIILSSNRTIIEVMEGSTSTYSQDDLDVVRMEWAEFV 119
            ++KCP+Q G VEC YYVM++M++II + + +I+ + EG   TY+Q+++DVVR+EWAE V
Sbjct: 418 EVVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILNMFEGK-ETYTQEEIDVVRVEWAEQV 477

[Close]
BLAST of MELO3C030161.2 vs. TrEMBL
Match: tr|A0A2P6S839|A0A2P6S839_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0318241 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-22
Identity = 55/124 (44.35%), Postives = 82/124 (66.13%), Query Frame = 0 

Query: 3   PYNSGNHWCLIAIDFSRDTAYWMDPLRN-RINNDASDVVRMAF-------GISNKKKPVW 62
           PYN+GNHW L AI+      Y+ DPL N  IN    ++V ++        G  N+KK  W
Sbjct: 115 PYNTGNHWLLAAINPYTALLYYFDPLSNININPGMKNIVELSIKMFNAQKGRKNRKKVHW 174

Query: 63  RIIKCPKQGGIVECRYYVMRFMRDIILSSNRTIIEVMEGSTSTYSQDDLDVVRMEWAEFV 119
            ++KCP+Q G+VEC YYVM++M++II + +R+I+ + E    TY+Q+++DVVR+EWAE V
Sbjct: 175 EVVKCPRQPGLVECGYYVMKYMKEIIGTPSRSILNMFE-EKETYTQEEIDVVRVEWAEQV 234

[Close]
BLAST of MELO3C030161.2 vs. TrEMBL
Match: tr|A0A2P6QQA8|A0A2P6QQA8_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0390571 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.7e-21
Identity = 53/123 (43.09%), Postives = 81/123 (65.85%), Query Frame = 0 

Query: 4   YNSGNHWCLIAIDFSRDTAYWMDPLRN-RINNDASDVVRMAFGISN------KKKPV-WR 63
           YN+GNHW L AI+      Y+ DPL N  IN    +++ ++  + N       +KPV W 
Sbjct: 470 YNTGNHWLLAAINTFTTLVYYFDPLSNININPGMKNIIELSIKMFNAQKGRKSRKPVHWE 529

Query: 64  IIKCPKQGGIVECRYYVMRFMRDIILSSNRTIIEVMEGSTSTYSQDDLDVVRMEWAEFVN 119
           ++KCP+Q G VEC YYVM++M++II + + +I+ + EG   TY+Q+++DVVR+EWAE V+
Sbjct: 530 VVKCPRQPGSVECGYYVMKYMKEIIGTPSSSILNMFEGK-ETYTQEEIDVVRIEWAEQVD 589

The following BLAST results are available for this feature:
BLAST of MELO3C030161.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016902600.11.5e-2393.10PREDICTED: uncharacterized protein LOC107991758 [Cucumis melo][more]
XP_022156946.19.8e-2346.79uncharacterized protein LOC111023778 [Momordica charantia][more]
PRQ21563.11.7e-2245.16putative Ulp1 protease family catalytic domain-containing protein [Rosa chinensi... [more]
PRQ44716.11.7e-2245.16putative Ulp1 protease family catalytic domain-containing protein [Rosa chinensi... [more]
XP_024186978.11.7e-2245.16uncharacterized protein LOC112191799 [Rosa chinensis][more]
BLAST of MELO3C030161.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C030161.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C030161.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E3P6|A0A1S4E3P6_CUCME1.0e-2393.10uncharacterized protein LOC107991758 OS=Cucumis melo OX=3656 GN=LOC107991758 PE=... [more]
tr|A0A2P6PI11|A0A2P6PI11_ROSCH1.1e-2245.16Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen... [more]
tr|A0A2P6RE63|A0A2P6RE63_ROSCH1.1e-2245.16Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen... [more]
tr|A0A2P6S839|A0A2P6S839_ROSCH1.4e-2244.35Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen... [more]
tr|A0A2P6QQA8|A0A2P6QQA8_ROSCH4.7e-2143.09Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinen... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain_like_cys_pep_sf
IPR003653Peptidase_C48_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0008233 peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C030161.2.1MELO3C030161.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.395.10coord: 1..118
e-value: 6.5E-9
score: 37.4
IPR003653Ulp1 protease family, C-terminal catalytic domainPFAMPF02902Peptidase_C48coord: 2..114
e-value: 4.9E-5
score: 23.2
IPR003653Ulp1 protease family, C-terminal catalytic domainPROSITEPS50600ULP_PROTEASEcoord: 1..79
score: 9.332
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILYSSF54001Cysteine proteinasescoord: 2..113

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C030161.2Cucumber (Chinese Long) v3cucmedB473
MELO3C030161.2Watermelon (97103) v2medwmbB297
MELO3C030161.2Wax gourdmedwgoB347
MELO3C030161.2Cucumber (Gy14) v2cgybmedB413
MELO3C030161.2Cucumber (Gy14) v1cgymedB588
MELO3C030161.2Wild cucumber (PI 183967)cpimedB464
MELO3C030161.2Cucumber (Chinese Long) v2cumedB455
MELO3C030161.2Bottle gourd (USVL1VR-Ls)lsimedB496
MELO3C030161.2Watermelon (Charleston Gray)medwcgB296
MELO3C030161.2Watermelon (97103) v1medwmB304