MELO3C016000.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C016000.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Outer envelope pore protein 16-4, chloroplastic
Location	chr01 : 32382461 .. 32385855 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAACTTGGTAGACACAGAGCTCTCAGCATACGGACCTCCGAAGGAAATTGAGAATTGGAAGATGGAAGACGAACTCAACGGCGTCGTTCCTTGTTCTTCCCTCGCCGTCGAATCCAGCATTCGCGTCGGAACGGTAAACTTTACGAATAATTTCTCAAACTATGATTCATTTTCTTTAATTTCTTCCTCTGAATTTCCTGCCCCTGTTCATCTTCAGGCCGGCGCTCTATGGGGTTTGTGTTTGGGTCCGTACAATTCCCGTAAAAATGGTAATCTGAAAATCTATCTTATCGATTGATTTTTCTATTTCACTTTATCTTCTACACTTATTTTGTTTTCTCTCTTACAGGCCTCAGTGGCGTCAGCCATGCTGCTTTCGTGGTACCATACACTTGCTATTTAGCTTTGATTTACTTTTATTTGATTGAAATTGAGATTGTGGAGCTGTGGCGTCTGTCCAATGTGAAATCGTGTCTTTGTGATCTATTTTGCAGGCAAAGTCTGTTGGAAAATACGGCTTTCAATGTGGTAATGGTGACTGTCTTAGTATTTTGGCCTTTATAGATTGTTGAGCTGTGTTTGTGGCTGATTTTTTGCTTGGTTTTGTTCTGGTGGAAGAAATAGCTAAAGAATTTGGGTTGTAGGACTTGTTGCTGGAACTTTTACTCTGACTCACTGTGGGATTCAAAGATATAGAAGGAGGAATGATTGGGTTAGTCACACTCATGAAATGATTCATTTTCACATTTATCATTTGTTCGAATGTATCCACTGTGAAGGTTGCCTAGCTGTATTCCCAGAACTTGACCTCCCTTAGTTCATCGTGCATTAGATGGGTAACCCAAAAATGCCTCCCTCTTTTCGAGTGAATAATACCTCAAGAAAAGATGAGATTTCTGGTGACAGACAAATATAAAGGGTGTGGTAGAATGATTATACTTCAAATCATTCCCATCTAAAGCCATATCATTGGAAAGGCTCTGATTCTATTGAATTCTGTGTTTATCTTAGAACCTCTTCGGGTTACCTACTAATATATCATATACCAGTTATGGTTAATTAGATAATCATGGGCTCCACGTCAAAACCAAATTACAGTAAGAGAAGTAATTCATGTATGTTATAAATATTGCGAGGTATAGTCATTCATCTAATATGGGTACACAACATGTATCTCAAGATGGTGTCTCTTTGAGTTGACCATTGTTGGGTCAGATTCATATTATTGGGTTGAATCCATCTCCAAAACCAATGGTAGTCGAAGGAGTAACTCATATATCATGTAAAGATCATGAAGTCTCTTTTATCTTTTCGATGTGGGATACATAACATGATAAGTGTTTGGCTTTGTATTATACTTACATCCCAATTTTGGTATGAGTCTCATCTTTTCAGTTACTTTCAAAATATATTTATTGGGAATCTCTCCTTTTTTACTAGGTTTTGAGTGAAGGTTTCCTAGGTTGAGCAGTTTTTACCACCTGATTATCTTTTTGTGGGAAAAAATGGGTGAGTGGAAATATAGAGGCATCCAAAAGTATTTACAACACTACCAAGTGTTTGGATGCAGTCATTTTAAAAAGATTTACTTTTCTAAAATAAATATAAATTAATTCCAACCATAAAGGAACGATATACCATTTGTAGAATTTATCTTGTTAGAAGTGTCTTAAATTTTCTTTATTAGTTTTATTGTTACACTGATAGGAATGCTATCAGGATCTTATTAGAGTATTAAGGATATATCAATAATTTGCTAGGGGTTTGTTATTCTTGTTGGTCTTAAAATGCTGGGGAGAGAAATGAAAAAGATACCCATTATTGTGGTGAATGAATTAGAATTTGAGAGAGATCTCAAGAGGGGAGGGTTCAAATTTCTCAATTACTTGGCTTATTTTGTAAGTTCCTTTACCTTTTATACTACAATACATTGCCGTCCTATTTTAGTTCCTATCATACTTATCTTTATTTTGGTTAAAAAGAATTTTAAGTTCAATGAAACACATATTTAAAATCTTGATGTAGAAATCCCGTGTCCCTTGCGTGATCAGCTTTCACACAGTTCTGAAAATTGTTGACAGCAGAAAGAACTGACCTTTTTACTTGGAATTGTTACTGCAACTCTTGGTAGATGATAACTCAACTGTATCTGGAATTTGAGGACCATTTATTCAGACTTGTATTTTCATTTAGAATTTAATGTTGATCAATGTTTCTTCTTAAGAAAACAATTAATTGTTGCTTAATATATTTAGACTTGCCTAACATAAACTATTTCCTATTCTGAAGAAAACATTCCAAGACTGCAGTTTTCTTTGGCGTGCTTAGAGGAGGTTTAATCGTGGCTAGGTTTTATGTCTTGTGAGCATTTGCGTCATTAGATTTCTTGAAATTATTCTTTAGGCCCGATACTTTTTTTTGGACTGGAGCCTTTTCTTGTAAGTTAGTTTCTGGTTTATTTTCTCTCAATGAAAGTTCGACTTTCCTGATTTAAAAAGTTTGGTTCCTTAGTTGTTACATATCTTATAGTCAATAAGCTTGGCTTACAACTATTTGGATATCAGATATGCATTGCCTTTTTGGGAATGTACGTTTGCTAAATAGGTTAAGCTTTTGTTTTGATCTTGAATACATTTCATTTTTCATTTCTTGTTCGAATGATTTTCATGCCAGAAATACCTACTCCAGCGACCAAGTTAACCAAAACTAAAGCAAACAAAATATATCTTTACACCTCTCTTTTCCATTTGGCAGTTGAATGGTTTGATCGCTGGTGCAGTCGCAGGAGCAGCCATTGCTACAAAGACTAGGAGTTGGTCACAGGTAGTTGGGATGGCTGCTCTTGTCTCTGCCTTCAGCGCTGCTGCTGAATATTCAAGATCACTTTAGAAAACCTCTTGTAGGAACGGTGAGTTACTCGGCATTTGATCCATTTCCACCATTTCCAATTGTGAATACAGGCTACGTGCTTTTACAAAATATTCTTCTATATAATGATTATGACAATTTTTACAAGTATAGCATCTCTTGTCCAGGATTCAGCAAGTGTCCTCTCATTATTCAACAAAATTGTTTGCTGTGTCGAGAAAGGTTTGTCTGTATCTGTTGAAGGAGGGAACGTAACCTCGTCGTGTCACTGTCAATAGGATTCGATCTTCATGATTGCAGCTAACTTCTGGGGAGTTAAAGCCGGAAAGATTGGGGAAGTAACTCCTTACCTTGATGTATAATAGCCATGAGCAACTGCTGTATAAGAAGATGAAACATCATATACAAATAGTTGATATTCCATTTCTTTCTTTAGTTTTACTTTCTACCGAAACTTATATCATTTTGTTTCAGTTAACTTCTGTTTGGATCTCAACTTTATGAGAATCAGTTCTAGAATTTCAAT

mRNA sequence

GGAACTTGGTAGACACAGAGCTCTCAGCATACGGACCTCCGAAGGAAATTGAGAATTGGAAGATGGAAGACGAACTCAACGGCGTCGTTCCTTGTTCTTCCCTCGCCGTCGAATCCAGCATTCGCGTCGGAACGGCCGGCGCTCTATGGGGTTTGTGTTTGGGTCCGTACAATTCCCGTAAAAATGGCCTCAGTGGCGTCAGCCATGCTGCTTTCGTGGCAAAGTCTGTTGGAAAATACGGCTTTCAATGTGGACTTGTTGCTGGAACTTTTACTCTGACTCACTGTGGGATTCAAAGATATAGAAGGAGGAATGATTGGTTGAATGGTTTGATCGCTGGTGCAGTCGCAGGAGCAGCCATTGCTACAAAGACTAGGAGTTGGTCACAGGTAGTTGGGATGGCTGCTCTTGTCTCTGCCTTCAGCGCTGCTGCTGAATATTCAAGATCACTTTAGAAAACCTCTTGTAGGAACGGATTCAGCAAGTGTCCTCTCATTATTCAACAAAATTGTTTGCTGTGTCGAGAAAGGTTTGTCTGTATCTGTTGAAGGAGGGAACGTAACCTCGTCGTGTCACTGTCAATAGGATTCGATCTTCATGATTGCAGCTAACTTCTGGGGAGTTAAAGCCGGAAAGATTGGGGAAGTAACTCCTTACCTTGATGTATAATAGCCATGAGCAACTGCTGTATAAGAAGATGAAACATCATATACAAATAGTTGATATTCCATTTCTTTCTTTAGTTTTACTTTCTACCGAAACTTATATCATTTTGTTTCAGTTAACTTCTGTTTGGATCTCAACTTTATGAGAATCAGTTCTAGAATTTCAAT

Coding sequence (CDS)

ATGGAAGACGAACTCAACGGCGTCGTTCCTTGTTCTTCCCTCGCCGTCGAATCCAGCATTCGCGTCGGAACGGCCGGCGCTCTATGGGGTTTGTGTTTGGGTCCGTACAATTCCCGTAAAAATGGCCTCAGTGGCGTCAGCCATGCTGCTTTCGTGGCAAAGTCTGTTGGAAAATACGGCTTTCAATGTGGACTTGTTGCTGGAACTTTTACTCTGACTCACTGTGGGATTCAAAGATATAGAAGGAGGAATGATTGGTTGAATGGTTTGATCGCTGGTGCAGTCGCAGGAGCAGCCATTGCTACAAAGACTAGGAGTTGGTCACAGGTAGTTGGGATGGCTGCTCTTGTCTCTGCCTTCAGCGCTGCTGCTGAATATTCAAGATCACTTTAG

Protein sequence

MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYGFQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAFSAAAEYSRSL

Homology

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BLAST of MELO3C016000.2 vs. NCBI nr
Match: XP_008451566.1 (PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis melo])

HSP 1 Score: 258.8 bits (660), Expect = 9.6e-66
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG
Sbjct: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF
Sbjct: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120

Query: 121 SAAAEYSRSL 131
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

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BLAST of MELO3C016000.2 vs. NCBI nr
Match: XP_004136026.1 (PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis sativus] >KGN44942.1 hypothetical protein Csa_7G397550 [Cucumis sativus])

HSP 1 Score: 254.2 bits (648), Expect = 2.4e-64
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGL+GV+HAAFVA+SVGKYG
Sbjct: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLTGVAHAAFVARSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAGTFTLTHCGIQRYR+RNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF
Sbjct: 61  FQCGLVAGTFTLTHCGIQRYRKRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120

Query: 121 SAAAEYSRSL 131
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

[Close]

BLAST of MELO3C016000.2 vs. NCBI nr
Match: XP_022143748.1 (outer envelope pore protein 16-4, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 249.2 bits (635), Expect = 7.6e-63
Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKNGL GV HAAFVAKSVGKYG
Sbjct: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLRGVGHAAFVAKSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAGTFTLTHCGIQRYRR+NDWLNGLIAGAVAGAAIAT+TRSWSQV GMAALVSAF
Sbjct: 61  FQCGLVAGTFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVFGMAALVSAF 120

Query: 121 SAAAEYSRSL 131
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

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BLAST of MELO3C016000.2 vs. NCBI nr
Match: XP_022960078.1 (outer envelope pore protein 16-4, chloroplastic [Cucurbita moschata] >XP_022960079.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita moschata] >XP_023004690.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita maxima] >XP_023004691.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita maxima] >XP_023513746.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023513747.1 outer envelope pore protein 16-4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 248.4 bits (633), Expect = 1.3e-62
Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDELNGVVPCSSLAVES+IRVGTAGALWGLC+GPYNSRKNGLSGV HAAFVAKSVGKYG
Sbjct: 1   MEDELNGVVPCSSLAVESTIRVGTAGALWGLCMGPYNSRKNGLSGVDHAAFVAKSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAG FTLTHCGIQRYRR+NDWLNGLIAGAVAGAAIAT+TRSWSQV GMAALVSAF
Sbjct: 61  FQCGLVAGVFTLTHCGIQRYRRKNDWLNGLIAGAVAGAAIATRTRSWSQVGGMAALVSAF 120

Query: 121 SAAAEYSRSL 131
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

[Close]

BLAST of MELO3C016000.2 vs. NCBI nr
Match: XP_023880656.1 (outer envelope pore protein 16-4, chloroplastic-like [Quercus suber])

HSP 1 Score: 206.1 bits (523), Expect = 7.4e-50
Identity = 95/129 (73.64%), Postives = 117/129 (90.70%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDE+NG VPCSSLAV+S +RVGTAGA+WGLC+GPY++RK GLSGV+ A+FVAK+VGK+G
Sbjct: 1   MEDEINGAVPCSSLAVDSILRVGTAGAIWGLCMGPYDARKQGLSGVTRASFVAKAVGKFG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQ GLVAG + +T CGIQRYRR+NDW+NGL+AGA+AGAA A +TRSW+QV+GMA LVS F
Sbjct: 61  FQYGLVAGIYMITRCGIQRYRRQNDWVNGLVAGALAGAAFAARTRSWTQVIGMAGLVSVF 120

Query: 121 SAAAEYSRS 130
           SAAA+YSR+
Sbjct: 121 SAAADYSRT 129

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BLAST of MELO3C016000.2 vs. TAIR10
Match: AT3G62880.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein)

HSP 1 Score: 183.7 bits (465), Expect = 7.1e-47
Identity = 87/129 (67.44%), Postives = 107/129 (82.95%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           ME+EL   VPCSSL VES +RV TAG L+GLC GP ++RK GLSGVS A+FVAKS+G++G
Sbjct: 1   MEEELLSAVPCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSGVSQASFVAKSIGRFG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLV+G FT+THCG+QRYR +NDW+N L+ GAVAGAA+A  TR+W+QVVGMA LVSAF
Sbjct: 61  FQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAF 120

Query: 121 SAAAEYSRS 130
           S  A  +R+
Sbjct: 121 SVLANCTRT 129

[Close]

BLAST of MELO3C016000.2 vs. TAIR10
Match: AT4G16160.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein)

HSP 1 Score: 41.2 bits (95), Expect = 5.7e-04
Identity = 31/83 (37.35%), Postives = 42/83 (50.60%), Query Frame = 0


Query: 52  VAKSVGKYGFQCGLVAGTFTLTHCGIQRYR-RRNDWLNGLIAGAVAGAAIATKT---RSW 111
           + K+ GK   Q GL AG ++    G+   R   +DW N  +AGA+ GAA+A  T    S 
Sbjct: 95  LVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALTGAAMAMTTSERTSH 154

Query: 112 SQVVGMAALVSAFSAAAEYSRSL 131
            QVV  A   +A S AA    S+
Sbjct: 155 EQVVQSALTGAAISTAANLLSSV 177

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BLAST of MELO3C016000.2 vs. Swiss-Prot
Match: sp|Q9LZH8|OP164_ARATH (Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP164 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-45
Identity = 87/129 (67.44%), Postives = 107/129 (82.95%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           ME+EL   VPCSSL VES +RV TAG L+GLC GP ++RK GLSGVS A+FVAKS+G++G
Sbjct: 1   MEEELLSAVPCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSGVSQASFVAKSIGRFG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLV+G FT+THCG+QRYR +NDW+N L+ GAVAGAA+A  TR+W+QVVGMA LVSAF
Sbjct: 61  FQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAISTRNWTQVVGMAGLVSAF 120

Query: 121 SAAAEYSRS 130
           S  A  +R+
Sbjct: 121 SVLANCTRT 129

[Close]

BLAST of MELO3C016000.2 vs. Swiss-Prot
Match: sp|Q5BIN4|TIM22_BOVIN (Mitochondrial import inner membrane translocase subunit Tim22 OS=Bos taurus OX=9913 GN=TIMM22 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.2e-04
Identity = 26/79 (32.91%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 52  VAKSVGK----YGFQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSW 111
           V K +G+    Y     +V   F+ T C ++ YR ++DW N +I+G + G AI  +    
Sbjct: 114 VLKDMGQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGLK 173

Query: 112 SQVVGMAALVSAFSAAAEY 127
           + V+G     +AFSAA +Y
Sbjct: 174 AGVIGCGGF-AAFSAAIDY 191

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BLAST of MELO3C016000.2 vs. TrEMBL
Match: tr|A0A1S3BSK4|A0A1S3BSK4_CUCME (outer envelope pore protein 16-4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492809 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 6.4e-66
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG
Sbjct: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF
Sbjct: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120

Query: 121 SAAAEYSRSL 131
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

[Close]

BLAST of MELO3C016000.2 vs. TrEMBL
Match: tr|A0A0A0K992|A0A0A0K992_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397550 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 1.6e-64
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGL+GV+HAAFVA+SVGKYG
Sbjct: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLTGVAHAAFVARSVGKYG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAGTFTLTHCGIQRYR+RNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF
Sbjct: 61  FQCGLVAGTFTLTHCGIQRYRKRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120

Query: 121 SAAAEYSRSL 131
           SAAAEYSRSL
Sbjct: 121 SAAAEYSRSL 130

[Close]

BLAST of MELO3C016000.2 vs. TrEMBL
Match: tr|B9SAS0|B9SAS0_RICCO (Protein translocase, putative OS=Ricinus communis OX=3988 GN=RCOM_1178330 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.4e-49
Identity = 95/129 (73.64%), Postives = 114/129 (88.37%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           MEDEL G +PCSS AV+S +RVGTAGA+WGLC+GP+N+RK GL+G S A+FVAKSVGK+ 
Sbjct: 1   MEDELYGDIPCSSYAVDSILRVGTAGAIWGLCIGPHNARKRGLTGASQASFVAKSVGKFS 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAG FT THCGI+RYRR+NDW+N LIAGAVAGAA+A  TR+W+QVVGMA LVSAF
Sbjct: 61  FQCGLVAGVFTFTHCGIRRYRRKNDWVNALIAGAVAGAAVAAGTRNWTQVVGMAGLVSAF 120

Query: 121 SAAAEYSRS 130
           S AA+YS++
Sbjct: 121 SVAADYSKT 129

[Close]

BLAST of MELO3C016000.2 vs. TrEMBL
Match: tr|A0A2C9WMW0|A0A2C9WMW0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G219200 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 5.4e-49
Identity = 94/129 (72.87%), Postives = 113/129 (87.60%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           ME++LNGVVPCSSLAV+S +RVGTAG +WG C+GPY +RK GLSG + A+FVAKS+GK+ 
Sbjct: 1   MEEDLNGVVPCSSLAVDSILRVGTAGGIWGSCIGPYEARKRGLSGAARASFVAKSIGKFS 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAG FT THCGIQRYR++NDW+N +IAGAVAGAA+A  TRSW QVV MA LVSAF
Sbjct: 61  FQCGLVAGVFTFTHCGIQRYRKKNDWVNSVIAGAVAGAAVAAGTRSWPQVVWMAGLVSAF 120

Query: 121 SAAAEYSRS 130
           SAAA+YS++
Sbjct: 121 SAAADYSKT 129

[Close]

BLAST of MELO3C016000.2 vs. TrEMBL
Match: tr|B9I9R2|B9I9R2_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G128900v3 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.6e-48
Identity = 95/129 (73.64%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 1   MEDELNGVVPCSSLAVESSIRVGTAGALWGLCLGPYNSRKNGLSGVSHAAFVAKSVGKYG 60
           ME+EL G VPCSSLAV+S +RVGTAGA+WG C+GPY++RK GL+GV+ A+FVAK++GK+G
Sbjct: 1   MEEELIGAVPCSSLAVDSVLRVGTAGAIWGSCIGPYDARKRGLTGVAQASFVAKTIGKFG 60

Query: 61  FQCGLVAGTFTLTHCGIQRYRRRNDWLNGLIAGAVAGAAIATKTRSWSQVVGMAALVSAF 120
           FQCGLVAG FT T CGIQRYRR+NDW+N LIAGAVAGAA+A  TRSW+QVVGMA LVSAF
Sbjct: 61  FQCGLVAGVFTATCCGIQRYRRQNDWVNPLIAGAVAGAAVAAGTRSWTQVVGMAGLVSAF 120

Query: 121 SAAAEYSRS 130
           S AA+YS++
Sbjct: 121 SVAADYSKT 129

The following BLAST results are available for this feature:

BLAST of MELO3C016000.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451566.1	9.6e-66	100.00	PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis melo]	[more]
XP_004136026.1	2.4e-64	96.92	PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis sativus] >KG...	[more]
XP_022143748.1	7.6e-63	94.62	outer envelope pore protein 16-4, chloroplastic isoform X2 [Momordica charantia]	[more]
XP_022960078.1	1.3e-62	94.62	outer envelope pore protein 16-4, chloroplastic [Cucurbita moschata] >XP_0229600...	[more]
XP_023880656.1	7.4e-50	73.64	outer envelope pore protein 16-4, chloroplastic-like [Quercus suber]	[more]

BLAST of MELO3C016000.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G62880.1	7.1e-47	67.44	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT4G16160.2	5.7e-04	37.35	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

BLAST of MELO3C016000.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LZH8\|OP164_ARATH	1.3e-45	67.44	Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q5BIN4\|TIM22_BOVIN	4.2e-04	32.91	Mitochondrial import inner membrane translocase subunit Tim22 OS=Bos taurus OX=9...	[more]

BLAST of MELO3C016000.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BSK4\|A0A1S3BSK4_CUCME	6.4e-66	100.00	outer envelope pore protein 16-4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0K992\|A0A0A0K992_CUCSA	1.6e-64	96.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G397550 PE=4 SV=1	[more]
tr\|B9SAS0\|B9SAS0_RICCO	2.4e-49	73.64	Protein translocase, putative OS=Ricinus communis OX=3988 GN=RCOM_1178330 PE=4 S...	[more]
tr\|A0A2C9WMW0\|A0A2C9WMW0_MANES	5.4e-49	72.87	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G219200 PE=4 SV=...	[more]
tr\|B9I9R2\|B9I9R2_POPTR	1.6e-48	73.64	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G128900v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0045039	protein import into mitochondrial inner membrane

Vocabulary: **Cellular Component**
Term	Definition
GO:0042721	mitochondrial inner membrane protein insertion complex

Vocabulary: **INTERPRO**
Term	Definition
IPR039175	TIM22

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0051179	localization
biological_process	GO:0045039	protein import into mitochondrial inner membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0043231	intracellular membrane-bounded organelle
cellular_component	GO:0044425	membrane part
cellular_component	GO:0042721	mitochondrial inner membrane protein insertion complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0042803	protein homodimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016000.2.1	MELO3C016000.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 15..121 e-value: 2.7E-14 score: 53.3
None	No IPR available	PANTHER	PTHR14110:SF5	OUTER ENVELOPE PORE PROTEIN 16-4, CHLOROPLASTIC	coord: 1..129
IPR039175	Mitochondrial import inner membrane translocase subunit TIM22	PANTHER	PTHR14110	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22	coord: 1..129

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C016000.2	Csa7G397550	Cucumber (Chinese Long) v2	cumedB511
MELO3C016000.2	CSPI07G17490	Wild cucumber (PI 183967)	cpimedB525
MELO3C016000.2	Cucsa.205540	Cucumber (Gy14) v1	cgymedB368
MELO3C016000.2	CmaCh17G010860	Cucurbita maxima (Rimu)	cmamedB373
MELO3C016000.2	CmaCh08G004240	Cucurbita maxima (Rimu)	cmamedB930
MELO3C016000.2	CmoCh08G004180	Cucurbita moschata (Rifu)	cmomedB920
MELO3C016000.2	Lsi02G024060	Bottle gourd (USVL1VR-Ls)	lsimedB201
MELO3C016000.2	Cp4.1LG17g07140	Cucurbita pepo (Zucchini)	cpemedB341
MELO3C016000.2	CsGy7G015930	Cucumber (Gy14) v2	cgybmedB467
MELO3C016000.2	Cla015070	Watermelon (97103) v1	medwmB181
MELO3C016000.2	ClCG09G005860	Watermelon (Charleston Gray)	medwcgB155
MELO3C016000.2	Cla97C09G168360	Watermelon (97103) v2	medwmbB194
MELO3C016000.2	Bhi09G000718	Wax gourd	medwgoB255
MELO3C016000.2	CsaV3_7G029280	Cucumber (Chinese Long) v3	cucmedB538

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C016000.2	Cucurbita moschata (Rifu)	cmomedB359
MELO3C016000.2	Cucurbita pepo (Zucchini)	cpemedB145
MELO3C016000.2	Silver-seed gourd	carmedB0112
MELO3C016000.2	Silver-seed gourd	carmedB0572