MELO3C028837.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCACTGAATATAGGTTTTTCTTCTTTTGTTTCAAATGATGAAGTTATAAGAGACATCTCTTATTATTATGATTTGAAAGAAAAATGTTTATTTGAAAGTAAAAAAGTGCATTCAAAGTGTTTTTGCATAATAGCAGTGAAGAACAACTTTCAATTTAGGACTATAGAATCAAATTTGAAGTCTCTTGAATTTAGATGTCTGCAAGAAGGCTGCAAATGATATGTAAGGGCATCTCGTTATAAGAAGAGTGATTTGTGGATGCTACGAAAATAAATTTTCTGCTTCTCACATGCAAGCTTCTTCAACAGTAATTGGCAATTGTTTGATAGATGACTTTAGATTCATGTATACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGGCTCGTACAAATCTTGGAGTTAATATAAGTTACCTAGCTTGGAAGGCAAAAGAACATATGGTAAAGATATTACATGGTGACACAGTTGAATCATATGCATTGATTCCAATATTCTTTGATAAATTGGTTGAATCTAACCCAGGTATGATCAATTTTTTATATCAAATTTAAATTGATTTGCAGATAGATATGGATAGACTAATATCACAGTCTATCTAGATAGACCAATATTGACATCTTTTAGATTCTTTTTTGTTTGCGCTGATAGAAATGTGTTTTTAATTATTATAGGTACATGCAGTACTTTAGAAATGAATGATAATGGTCATTTCAAGTTTGCTTTATGGCTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTATTATTTATGTGGATGGGACATTTTTGAAGTGCAAGTTTAGTGGCATCCTATTAACAGCCTCATCATAAGATGTTAACAATTAAATCTTCCCTTTTGCTTTTGTCATTGTAGATTCTGAAAATAATGTATCATAAACATGGTTTTTTAAGAAGATACGA ATGTCACTGAATATAGGTTTTTCTTCTTTTGTTTCAAATGATGAAGTTATAAGAGACATCTCTTATTATTATGATTTGAAAGAAAAATGTTTATTTGAAAGTAAAAAAGTGCATTCAAAGTGTTTTTGCATAATAGCAGTGAAGAACAACTTTCAATTTAGGACTATAGAATCAAATTTGAAGTCTCTTGAATTTAGATGTCTGCAAGAAGGCTGCAAATGATATGTAAGGGCATCTCGTTATAAGAAGAGTGATTTGTGGATGCTACGAAAATAAATTTTCTGCTTCTCACATGCAAGCTTCTTCAACAGTAATTGGCAATTGTTTGATAGATGACTTTAGATTCATGTATACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGGCTCGTACAAATCTTGGAGTTAATATAAGTTACCTAGCTTGGAAGGCAAAAGAACATATGGTAAAGATATTACATGGTGACACAGTTGAATCATATGCATTGATTCCAATATTCTTTGATAAATTGGTTGAATCTAACCCAGGTACATGCAGTACTTTAGAAATGAATGATAATGGTCATTTCAAGTTTGCTTTATGGCTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTATTATTTATGTGGATGGGACATTTTTGAAGTGCAAGTTTAGTGGCATCCTATTAACAGCCTCATCATAAGATGTTAACAATTAAATCTTCCCTTTTGCTTTTGTCATTGTAGATTCTGAAAATAATGTATCATAAACATGGTTTTTTAAGAAGATACGA ATGCAAGCTTCTTCAACAGTAATTGGCAATTGTTTGATAGATGACTTTAGATTCATGTATACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGGCTCGTACAAATCTTGGAGTTAATATAAGTTACCTAGCTTGGAAGGCAAAAGAACATATGGTAAAGATATTACATGGTGACACAGTTGAATCATATGCATTGATTCCAATATTCTTTGATAAATTGGTTGAATCTAACCCAGGTACATGCAGTACTTTAGAAATGAATGATAATGGTCATTTCAAGTTTGCTTTATGGCTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTATTATTTATGTGGATGGGACATTTTTGA MQASSTVIGNCLIDDFRFMYTDRSIPKEIVHKARTNLGVNISYLAWKAKEHMVKILHGDTVESYALIPIFFDKLVESNPGTCSTLEMNDNGHFKFALWLLVHQLRGGNIVDLLFMWMGHF
BLAST of MELO3C028837.2 vs. NCBI nr
Match: XP_022156574.1 (uncharacterized protein LOC111023450 [Momordica charantia]) HSP 1 Score: 97.4 bits (241), Expect = 3.4e-17 Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 0
BLAST of MELO3C028837.2 vs. NCBI nr
Match: XP_022155934.1 (uncharacterized protein LOC111022933 [Momordica charantia]) HSP 1 Score: 82.0 bits (201), Expect = 1.5e-12 Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 0
BLAST of MELO3C028837.2 vs. NCBI nr
Match: XP_021821669.1 (uncharacterized protein LOC110763220 [Prunus avium]) HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = 0
BLAST of MELO3C028837.2 vs. NCBI nr
Match: XP_008338531.1 (PREDICTED: uncharacterized protein LOC103401593 [Malus domestica]) HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10 Identity = 38/106 (35.85%), Postives = 62/106 (58.49%), Query Frame = 0
BLAST of MELO3C028837.2 vs. NCBI nr
Match: XP_022889448.1 (uncharacterized protein LOC111404956 [Olea europaea var. sylvestris]) HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10 Identity = 37/109 (33.94%), Postives = 64/109 (58.72%), Query Frame = 0
BLAST of MELO3C028837.2 vs. TrEMBL
Match: tr|A0A2U1MG05|A0A2U1MG05_ARTAN (Transposase, MuDR, MULE transposase domain protein OS=Artemisia annua OX=35608 GN=CTI12_AA384380 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 5.6e-08 Identity = 34/96 (35.42%), Postives = 57/96 (59.38%), Query Frame = 0
BLAST of MELO3C028837.2 vs. TrEMBL
Match: tr|A0A1S4E0D5|A0A1S4E0D5_CUCME (uncharacterized protein LOC107991253 OS=Cucumis melo OX=3656 GN=LOC107991253 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.2e-07 Identity = 31/108 (28.70%), Postives = 54/108 (50.00%), Query Frame = 0
BLAST of MELO3C028837.2 vs. TrEMBL
Match: tr|A0A2U1KPE6|A0A2U1KPE6_ARTAN (Transposase, MuDR, MULE transposase domain protein OS=Artemisia annua OX=35608 GN=CTI12_AA579760 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.2e-07 Identity = 33/96 (34.38%), Postives = 58/96 (60.42%), Query Frame = 0
BLAST of MELO3C028837.2 vs. TrEMBL
Match: tr|A0A2U1MVA6|A0A2U1MVA6_ARTAN (Transposase, MuDR, MULE transposase domain protein OS=Artemisia annua OX=35608 GN=CTI12_AA338350 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.2e-07 Identity = 34/96 (35.42%), Postives = 56/96 (58.33%), Query Frame = 0
BLAST of MELO3C028837.2 vs. TrEMBL
Match: tr|A0A1S3C300|A0A1S3C300_CUCME (uncharacterized protein LOC103495899 OS=Cucumis melo OX=3656 GN=LOC103495899 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.8e-07 Identity = 33/108 (30.56%), Postives = 54/108 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|