MELO3C021000.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCCTCTCAATCTTTATCTCATGCTTTCGATCCCTAATTCTACTCCGAACAACCGCTGCAAGAAATCCGTCAAGCCAACCCGTGCTCAGTCGTCGTTGAATCTAATACTGTCATCCGTTGTGCCCAGCCTTGTCGTCGTCGAACCACCACATGCCCAACCTTGTCTTCGTCTTTGTTATGAAAAAATTAATTAATTTTTTGCGTGCTCTGCACTCTCTCCCATTCTCCTCCTTCTTCACACTCTCCGTTCCATATCCGCAAACAATTTCTCCTTTCCGAATTTCAACTTCTATAGGTCGATACTCCTATTCAATCTTTCTTTGTGTTAAAAGTTCTTTGTTCTTTTAAAAATCGTTTATGGGTTGCTACTTCACTGGTTTTTTTCTATTTATTTTTTCATTTTTCTGCAATTTAAAAATCTTTTAAAAATCGCTTATCGAGCTATTGGGTGAACGAACAACAAATGCAATTGAGACCTCACCGACTTTATCAACAAATAACAACTTCTCAAGCTTCATCCGGCAGCTCAACACTTATGTAAGTTTCAAAATGTGTTCAATAATACTTCTAAGATCGAGTAAATTTAATTTATAGATAGAATGGTTAGAGGTTCTTATATAAGTTATAAGTTTTTCTTTTTAGTATTTTGTGTGGTTTCTCTAGTTTTGTGAATTCTGGTTTAGAGTTTCTTTAGTTGGGGTGGGGAGTTTTGAAAAGGAATTATGATTCTAGGGTTTTAGGAAGATTAATCCAGAGAGATGGGAGTTCGCAAATGAAGGTTTCTTGAGAGGCCAAAAGCATCTCCTTAGAACTATTAAGAGAAGAAAACCACCAACCACTGACTCTTTGCCTTCCGAACAAGAACCCAGTGCTTGTATCGAAATTGGTCGTTTTGGACTCGATGTCGAACTCGACCGTTTGAAACGGGACAAGCAAGTGGTGATGATGGAACTAGTTAAGCTAAGGCGTGAGCAGTAA TCCTCTCAATCTTTATCTCATGCTTTCGATCCCTAATTCTACTCCGAACAACCGCTGCAAGAAATCCGTCAAGCCAACCCGTGCTCAGTCGTCGTTGAATCTAATACTGTCATCCGTTGTGCCCAGCCTTGTCGTCGTCGAACCACCACATGCCCAACCTTGTCTTCGTCTTTGTTATGAAAAAATTAATTAATTTTTTGCGTGCTCTGCACTCTCTCCCATTCTCCTCCTTCTTCACACTCTCCGTTCCATATCCGCAAACAATTTCTCCTTTCCGAATTTCAACTTCTATAGGTCGATACTCCTATTCAATCTTTCTTTGTGTTAAAAGTTCTTTGTTCTTTTAAAAATCGTTTATGGGTTGCTACTTCACTGGTTTTTTTCTATTTATTTTTTCATTTTTCTGCAATTTAAAAATCTTTTAAAAATCGCTTATCGAGCTATTGGGTGAACGAACAACAAATGCAATTGAGACCTCACCGACTTTATCAACAAATAACAACTTCTCAAGCTTCATCCGGCAGCTCAACACTTATGAAGATTAATCCAGAGAGATGGGAGTTCGCAAATGAAGGTTTCTTGAGAGGCCAAAAGCATCTCCTTAGAACTATTAAGAGAAGAAAACCACCAACCACTGACTCTTTGCCTTCCGAACAAGAACCCAGTGCTTGTATCGAAATTGGTCGTTTTGGACTCGATGTCGAACTCGACCGTTTGAAACGGGACAAGCAAGTGGTGATGATGGAACTAGTTAAGCTAAGGCGTGAGCAGTAA ATGCAATTGAGACCTCACCGACTTTATCAACAAATAACAACTTCTCAAGCTTCATCCGGCAGCTCAACACTTATGAAGATTAATCCAGAGAGATGGGAGTTCGCAAATGAAGGTTTCTTGAGAGGCCAAAAGCATCTCCTTAGAACTATTAAGAGAAGAAAACCACCAACCACTGACTCTTTGCCTTCCGAACAAGAACCCAGTGCTTGTATCGAAATTGGTCGTTTTGGACTCGATGTCGAACTCGACCGTTTGAAACGGGACAAGCAAGTGGTGATGATGGAACTAGTTAAGCTAAGGCGTGAGCAGTAA MQLRPHRLYQQITTSQASSGSSTLMKINPERWEFANEGFLRGQKHLLRTIKRRKPPTTDSLPSEQEPSACIEIGRFGLDVELDRLKRDKQVVMMELVKLRREQ
BLAST of MELO3C021000.2 vs. NCBI nr
Match: XP_004154162.1 (PREDICTED: heat stress transcription factor A-7a [Cucumis sativus] >XP_011649187.1 PREDICTED: heat stress transcription factor A-7a [Cucumis sativus] >XP_011649188.1 PREDICTED: heat stress transcription factor A-7a [Cucumis sativus] >KGN61706.1 hypothetical protein Csa_2G228420 [Cucumis sativus]) HSP 1 Score: 157.1 bits (396), Expect = 3.1e-35 Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of MELO3C021000.2 vs. NCBI nr
Match: XP_008449368.2 (PREDICTED: LOW QUALITY PROTEIN: heat stress transcription factor A-2d-like [Cucumis melo]) HSP 1 Score: 148.7 bits (374), Expect = 1.1e-32 Identity = 73/78 (93.59%), Postives = 75/78 (96.15%), Query Frame = 0
BLAST of MELO3C021000.2 vs. NCBI nr
Match: XP_022963889.1 (heat stress transcription factor A-6b-like [Cucurbita moschata] >XP_022963890.1 heat stress transcription factor A-6b-like [Cucurbita moschata] >XP_022963891.1 heat stress transcription factor A-6b-like [Cucurbita moschata] >XP_022963892.1 heat stress transcription factor A-6b-like [Cucurbita moschata] >XP_022963893.1 heat stress transcription factor A-6b-like [Cucurbita moschata]) HSP 1 Score: 136.0 bits (341), Expect = 7.4e-29 Identity = 67/80 (83.75%), Postives = 72/80 (90.00%), Query Frame = 0
BLAST of MELO3C021000.2 vs. NCBI nr
Match: XP_022967364.1 (heat stress transcription factor A-6b-like [Cucurbita maxima] >XP_022967365.1 heat stress transcription factor A-6b-like [Cucurbita maxima] >XP_022967366.1 heat stress transcription factor A-6b-like [Cucurbita maxima] >XP_022967367.1 heat stress transcription factor A-6b-like [Cucurbita maxima]) HSP 1 Score: 134.4 bits (337), Expect = 2.2e-28 Identity = 67/80 (83.75%), Postives = 71/80 (88.75%), Query Frame = 0
BLAST of MELO3C021000.2 vs. NCBI nr
Match: XP_022145971.1 (heat stress transcription factor A-2d-like [Momordica charantia]) HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26 Identity = 61/78 (78.21%), Postives = 69/78 (88.46%), Query Frame = 0
BLAST of MELO3C021000.2 vs. TAIR10
Match: AT4G17750.1 (heat shock factor 1) HSP 1 Score: 94.7 bits (234), Expect = 3.4e-20 Identity = 48/92 (52.17%), Postives = 66/92 (71.74%), Query Frame = 0
BLAST of MELO3C021000.2 vs. TAIR10
Match: AT3G22830.1 (heat shock transcription factor A6B) HSP 1 Score: 94.0 bits (232), Expect = 5.9e-20 Identity = 46/85 (54.12%), Postives = 60/85 (70.59%), Query Frame = 0
BLAST of MELO3C021000.2 vs. TAIR10
Match: AT3G02990.1 (heat shock transcription factor A1E) HSP 1 Score: 89.0 bits (219), Expect = 1.9e-18 Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0
BLAST of MELO3C021000.2 vs. TAIR10
Match: AT1G32330.1 (heat shock transcription factor A1D) HSP 1 Score: 88.2 bits (217), Expect = 3.2e-18 Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0
BLAST of MELO3C021000.2 vs. TAIR10
Match: AT2G26150.1 (heat shock transcription factor A2) HSP 1 Score: 88.2 bits (217), Expect = 3.2e-18 Identity = 39/75 (52.00%), Postives = 57/75 (76.00%), Query Frame = 0
BLAST of MELO3C021000.2 vs. Swiss-Prot
Match: sp|Q338B0|HFA2C_ORYSJ (Heat stress transcription factor A-2c OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2C PE=1 SV=2) HSP 1 Score: 109.4 bits (272), Expect = 2.4e-23 Identity = 47/78 (60.26%), Postives = 65/78 (83.33%), Query Frame = 0
BLAST of MELO3C021000.2 vs. Swiss-Prot
Match: sp|Q6F388|HFA2E_ORYSJ (Heat stress transcription factor A-2e OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2E PE=2 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.0e-21 Identity = 48/78 (61.54%), Postives = 66/78 (84.62%), Query Frame = 0
BLAST of MELO3C021000.2 vs. Swiss-Prot
Match: sp|Q6VBB2|HFA2B_ORYSJ (Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2B PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 3.9e-21 Identity = 47/78 (60.26%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of MELO3C021000.2 vs. Swiss-Prot
Match: sp|Q8H7Y6|HFA2D_ORYSJ (Heat stress transcription factor A-2d OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA2D PE=2 SV=2) HSP 1 Score: 100.5 bits (249), Expect = 1.1e-20 Identity = 48/79 (60.76%), Postives = 64/79 (81.01%), Query Frame = 0
BLAST of MELO3C021000.2 vs. Swiss-Prot
Match: sp|Q84T61|HSFA1_ORYSJ (Heat stress transcription factor A-1 OS=Oryza sativa subsp. japonica OX=39947 GN=HSFA1 PE=2 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.5e-20 Identity = 48/84 (57.14%), Postives = 66/84 (78.57%), Query Frame = 0
BLAST of MELO3C021000.2 vs. TrEMBL
Match: tr|A0A0A0LNX5|A0A0A0LNX5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G228420 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.1e-35 Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of MELO3C021000.2 vs. TrEMBL
Match: tr|A0A1S3BLW2|A0A1S3BLW2_CUCME (LOW QUALITY PROTEIN: heat stress transcription factor A-2d-like OS=Cucumis melo OX=3656 GN=LOC103491269 PE=3 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 7.3e-33 Identity = 73/78 (93.59%), Postives = 75/78 (96.15%), Query Frame = 0
BLAST of MELO3C021000.2 vs. TrEMBL
Match: tr|A0A2C9WNU6|A0A2C9WNU6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G204200 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 7.4e-25 Identity = 61/86 (70.93%), Postives = 70/86 (81.40%), Query Frame = 0
BLAST of MELO3C021000.2 vs. TrEMBL
Match: tr|A0A251LTL4|A0A251LTL4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G204200 PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.6e-24 Identity = 58/78 (74.36%), Postives = 67/78 (85.90%), Query Frame = 0
BLAST of MELO3C021000.2 vs. TrEMBL
Match: tr|B9H8D4|B9H8D4_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G214800v3 PE=3 SV=2) HSP 1 Score: 117.9 bits (294), Expect = 1.4e-23 Identity = 56/78 (71.79%), Postives = 67/78 (85.90%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|