MELO3C013398.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCAAGAGTCTTTCCGTATTCCAACTCTCAAAAGATAATTCAAAATTTGGTCTTCCTTTGTGTCTCATATTTCAAATCTTGGAACATATTACAACATGGGTTTCCGTCTGCCTCGAATTGTTACTGCTAAGCAAAGTCTTCAACGATCTTCATCAACAGGAAATAGAGAATCTCCGAAAGCTGTCGATGTTCCCAAGGGCTATTTTACCGTTTATGTCGGTGAGGAACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACCAGACTTCTTTTCAAGATTTGTTGAATCAAGCAGAAGAAGAATTTGGATACAATCATCCAATGGGTGGCATCACAATTCCTTGTCGTGAAGACTATTCCTCGATCTCACCAAGAGTTTGAATGACTCATGAAGCAAAGAGATTAGTATCTAGAAATGGACAGTATATACAAGGATTAGAAAAGAGCAAAATGTAGATTGTATACATTTTTTGAAATGAAAGACTTGATTCTTTTACATTGTTCATAGTTCTTTTCATGATTGAAACTGGATGATGAAACTACTTGAATGATTCCACTGGCTCGAAAATTTTACAT AGCAAGAGTCTTTCCGTATTCCAACTCTCAAAAGATAATTCAAAATTTGGTCTTCCTTTGTGTCTCATATTTCAAATCTTGGAACATATTACAACATGGGTTTCCGTCTGCCTCGAATTGTTACTGCTAAGCAAAGTCTTCAACGATCTTCATCAACAGGAAATAGAGAATCTCCGAAAGCTGTCGATGTTCCCAAGGGCTATTTTACCGTTTATGTCGGTGAGGAACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACCAGACTTCTTTTCAAGATTTGTTGAATCAAGCAGAAGAAGAATTTGGATACAATCATCCAATGGGTGGCATCACAATTCCTTGTCGTGAAGACTATTCCTCGATCTCACCAAGAGTTTGAATGACTCATGAAGCAAAGAGATTAGTATCTAGAAATGGACAGTATATACAAGGATTAGAAAAGAGCAAAATGTAGATTGTATACATTTTTTGAAATGAAAGACTTGATTCTTTTACATTGTTCATAGTTCTTTTCATGATTGAAACTGGATGATGAAACTACTTGAATGATTCCACTGGCTCGAAAATTTTACAT ATGGGTTTCCGTCTGCCTCGAATTGTTACTGCTAAGCAAAGTCTTCAACGATCTTCATCAACAGGAAATAGAGAATCTCCGAAAGCTGTCGATGTTCCCAAGGGCTATTTTACCGTTTATGTCGGTGAGGAACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACCAGACTTCTTTTCAAGATTTGTTGAATCAAGCAGAAGAAGAATTTGGATACAATCATCCAATGGGTGGCATCACAATTCCTTGTCGTGAAGACTATTCCTCGATCTCACCAAGAGTTTGA MGFRLPRIVTAKQSLQRSSSTGNRESPKAVDVPKGYFTVYVGEEQKKRFVIPLSYLNQTSFQDLLNQAEEEFGYNHPMGGITIPCREDYSSISPRV
BLAST of MELO3C013398.2 vs. NCBI nr
Match: XP_011658574.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus] >KGN43203.1 hypothetical protein Csa_7G008990 [Cucumis sativus]) HSP 1 Score: 171.4 bits (433), Expect = 1.5e-39 Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of MELO3C013398.2 vs. NCBI nr
Match: XP_008448013.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 170.2 bits (430), Expect = 3.3e-39 Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of MELO3C013398.2 vs. NCBI nr
Match: XP_008448014.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 169.9 bits (429), Expect = 4.3e-39 Identity = 80/89 (89.89%), Postives = 84/89 (94.38%), Query Frame = 0
BLAST of MELO3C013398.2 vs. NCBI nr
Match: XP_011658575.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus] >KGN43202.1 hypothetical protein Csa_7G008980 [Cucumis sativus]) HSP 1 Score: 169.1 bits (427), Expect = 7.4e-39 Identity = 81/89 (91.01%), Postives = 83/89 (93.26%), Query Frame = 0
BLAST of MELO3C013398.2 vs. NCBI nr
Match: XP_004144905.2 (PREDICTED: auxin-induced protein X10A-like [Cucumis sativus] >KGN43206.1 hypothetical protein Csa_7G009020 [Cucumis sativus]) HSP 1 Score: 168.3 bits (425), Expect = 1.3e-38 Identity = 81/88 (92.05%), Postives = 82/88 (93.18%), Query Frame = 0
BLAST of MELO3C013398.2 vs. TAIR10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 110.5 bits (275), Expect = 5.7e-25 Identity = 49/89 (55.06%), Postives = 69/89 (77.53%), Query Frame = 0
BLAST of MELO3C013398.2 vs. TAIR10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 101.7 bits (252), Expect = 2.6e-22 Identity = 50/90 (55.56%), Postives = 64/90 (71.11%), Query Frame = 0
BLAST of MELO3C013398.2 vs. TAIR10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 99.0 bits (245), Expect = 1.7e-21 Identity = 53/93 (56.99%), Postives = 63/93 (67.74%), Query Frame = 0
BLAST of MELO3C013398.2 vs. TAIR10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 98.6 bits (244), Expect = 2.2e-21 Identity = 45/81 (55.56%), Postives = 61/81 (75.31%), Query Frame = 0
BLAST of MELO3C013398.2 vs. TAIR10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 97.1 bits (240), Expect = 6.5e-21 Identity = 45/81 (55.56%), Postives = 61/81 (75.31%), Query Frame = 0
BLAST of MELO3C013398.2 vs. Swiss-Prot
Match: sp|P33080|AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 1.9e-25 Identity = 55/88 (62.50%), Postives = 70/88 (79.55%), Query Frame = 0
BLAST of MELO3C013398.2 vs. Swiss-Prot
Match: sp|P33083|AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 6.0e-24 Identity = 55/88 (62.50%), Postives = 68/88 (77.27%), Query Frame = 0
BLAST of MELO3C013398.2 vs. Swiss-Prot
Match: sp|P32295|ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23 Identity = 54/88 (61.36%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of MELO3C013398.2 vs. Swiss-Prot
Match: sp|P33081|AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23 Identity = 56/88 (63.64%), Postives = 63/88 (71.59%), Query Frame = 0
BLAST of MELO3C013398.2 vs. Swiss-Prot
Match: sp|P33082|AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.1e-22 Identity = 54/88 (61.36%), Postives = 62/88 (70.45%), Query Frame = 0
BLAST of MELO3C013398.2 vs. TrEMBL
Match: tr|A0A0A0K160|A0A0A0K160_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008990 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 9.8e-40 Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of MELO3C013398.2 vs. TrEMBL
Match: tr|A0A1S3BIR8|A0A1S3BIR8_CUCME (auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC103490323 PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 2.2e-39 Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = 0
BLAST of MELO3C013398.2 vs. TrEMBL
Match: tr|A0A1S3BIR0|A0A1S3BIR0_CUCME (auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC103490324 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 2.9e-39 Identity = 80/89 (89.89%), Postives = 84/89 (94.38%), Query Frame = 0
BLAST of MELO3C013398.2 vs. TrEMBL
Match: tr|A0A0A0K4J0|A0A0A0K4J0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G008980 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 4.9e-39 Identity = 81/89 (91.01%), Postives = 83/89 (93.26%), Query Frame = 0
BLAST of MELO3C013398.2 vs. TrEMBL
Match: tr|A0A0A0K5T8|A0A0A0K5T8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009020 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 8.3e-39 Identity = 81/88 (92.05%), Postives = 82/88 (93.18%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |