MELO3C013241.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCATTCCAGATTGGTGATCTGAAAGGGTTATTTGGTTTAATAATGGTTAACATGCAAATGCTGAGAGCAAAGTTAAAAGTGTTAGATGTTTCGTATGAAACTGGGACAGGTAGGGTTTTATTTACTTTTTGTTTTTTTTAATTTGTTGGAGTCCTCGTCATTTTTTTTTGGTAAAATTTTCTTCAGATTCATAAATGCCCTATTAAACTATTCCAAACATTGTCATCCTTCAATATTGCATTCTCTGTTTTCAACTTTGTTTGGGATCGATGATGATAGTTAGACTCGAAATCCTTGATCATTTTGGTGACTCTACATGGTATGGTTTTGGTATGCCACCCATGTTAAATTGTATACATGATCGTTATCATTTTTGGCATTGTCAAATTCTCCATGTGATTGAGATACACTGGGGTCGGGCATCCTGAAAAGCTCAGGTTTAGTCCTGCTTATTTTCATTTTCCACTGATGATAGTGTAGCTCTCTCTATTAGATATTATGATCAAATATGCATGTACTCTTTTTACTTCTTTCCTTTTTATGGAACTTAAATTTTAAATTGTTTGAAGTTAATAATCAATAACTTATCTAGGTAACACGACTCTCATATATCACCATGGAAAGCTGCTAACACTTTCGAAGGGAGATAAACCTTGTAAGTTTTATCTTCTCTCTTTCAAGTTCCGATATTTTCTCCTCAAACATCAGTCTCAAGATCTTGATGGGAAAGGAAAAATCAATTGTCCTCCCCCAATCACCCTATGGCTACTGAATAACAAAATTAGAAGCACAAACACCATTGAGTAGTTGGTTTTGCTTTATGTAGATGTTATAAAAGTGTTGGAGGGTGGAGATCTGCAGATGCTTGGTCTGCTGGATTATGACAAGAAATTGACACACACCTTCACTGCTCATCCAAAGGTTAATCCAGTCACTGGTATAAGCACCATAAAAGACACCAATTAAGTTTGGTGAAATATGATGAAGTGCTCAATGCTGATTAATTTTCTGCATGCAGGTGAAATGTTTACATTTGGTTATTCTCATTCACCGCCATATGTTACCTACAGAGTTATTTCCAAGGACGGTCTCATGCATGATCCCGTACCAATCACAATTCCAGCTCCGGTCATGATGTGA ATGTCATTCCAGATTGGTGATCTGAAAGGGTTATTTGGTTTAATAATGGTTAACATGCAAATGCTGAGAGCAAAGTTAAAAGTGTTAGATGTTTCGTATGAAACTGGGACAGGTAACACGACTCTCATATATCACCATGGAAAGCTGCTAACACTTTCGAAGGGAGATAAACCTTATGTTATAAAAGTGTTGGAGGGTGGAGATCTGCAGATGCTTGGTCTGCTGGATTATGACAAGAAATTGACACACACCTTCACTGCTCATCCAAAGGTTAATCCAGTCACTGGTGAAATGTTTACATTTGGTTATTCTCATTCACCGCCATATGTTACCTACAGAGTTATTTCCAAGGACGGTCTCATGCATGATCCCGTACCAATCACAATTCCAGCTCCGGTCATGATGTGA ATGTCATTCCAGATTGGTGATCTGAAAGGGTTATTTGGTTTAATAATGGTTAACATGCAAATGCTGAGAGCAAAGTTAAAAGTGTTAGATGTTTCGTATGAAACTGGGACAGGTAACACGACTCTCATATATCACCATGGAAAGCTGCTAACACTTTCGAAGGGAGATAAACCTTATGTTATAAAAGTGTTGGAGGGTGGAGATCTGCAGATGCTTGGTCTGCTGGATTATGACAAGAAATTGACACACACCTTCACTGCTCATCCAAAGGTTAATCCAGTCACTGGTGAAATGTTTACATTTGGTTATTCTCATTCACCGCCATATGTTACCTACAGAGTTATTTCCAAGGACGGTCTCATGCATGATCCCGTACCAATCACAATTCCAGCTCCGGTCATGATGTGA MSFQIGDLKGLFGLIMVNMQMLRAKLKVLDVSYETGTGNTTLIYHHGKLLTLSKGDKPYVIKVLEGGDLQMLGLLDYDKKLTHTFTAHPKVNPVTGEMFTFGYSHSPPYVTYRVISKDGLMHDPVPITIPAPVMM
BLAST of MELO3C013241.2 vs. NCBI nr
Match: ABB82946.1 (carotenoid cleavage dioxygenase, partial [Cucumis melo]) HSP 1 Score: 253.1 bits (645), Expect = 5.5e-64 Identity = 122/132 (92.42%), Postives = 126/132 (95.45%), Query Frame = 0
BLAST of MELO3C013241.2 vs. NCBI nr
Match: XP_008461300.1 (PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1 [Cucumis melo]) HSP 1 Score: 253.1 bits (645), Expect = 5.5e-64 Identity = 122/132 (92.42%), Postives = 126/132 (95.45%), Query Frame = 0
BLAST of MELO3C013241.2 vs. NCBI nr
Match: XP_004135934.1 (PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X1 [Cucumis sativus] >KGN45124.1 hypothetical protein Csa_7G428120 [Cucumis sativus]) HSP 1 Score: 249.6 bits (636), Expect = 6.0e-63 Identity = 120/132 (90.91%), Postives = 125/132 (94.70%), Query Frame = 0
BLAST of MELO3C013241.2 vs. NCBI nr
Match: XP_011659448.1 (PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1 isoform X2 [Cucumis sativus]) HSP 1 Score: 249.6 bits (636), Expect = 6.0e-63 Identity = 120/132 (90.91%), Postives = 125/132 (94.70%), Query Frame = 0
BLAST of MELO3C013241.2 vs. NCBI nr
Match: AFU91489.1 (carotenoid cleavage dioxygenase 1 [Momordica charantia]) HSP 1 Score: 246.5 bits (628), Expect = 5.1e-62 Identity = 118/132 (89.39%), Postives = 124/132 (93.94%), Query Frame = 0
BLAST of MELO3C013241.2 vs. TAIR10
Match: AT3G63520.1 (carotenoid cleavage dioxygenase 1) HSP 1 Score: 223.0 bits (567), Expect = 1.1e-58 Identity = 101/132 (76.52%), Postives = 117/132 (88.64%), Query Frame = 0
BLAST of MELO3C013241.2 vs. TAIR10
Match: AT3G14440.1 (nine-cis-epoxycarotenoid dioxygenase 3) HSP 1 Score: 97.4 bits (241), Expect = 7.0e-21 Identity = 50/132 (37.88%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of MELO3C013241.2 vs. TAIR10
Match: AT1G30100.1 (nine-cis-epoxycarotenoid dioxygenase 5) HSP 1 Score: 91.3 bits (225), Expect = 5.0e-19 Identity = 47/132 (35.61%), Postives = 72/132 (54.55%), Query Frame = 0
BLAST of MELO3C013241.2 vs. TAIR10
Match: AT1G78390.1 (nine-cis-epoxycarotenoid dioxygenase 9) HSP 1 Score: 85.9 bits (211), Expect = 2.1e-17 Identity = 47/132 (35.61%), Postives = 70/132 (53.03%), Query Frame = 0
BLAST of MELO3C013241.2 vs. TAIR10
Match: AT4G19170.1 (nine-cis-epoxycarotenoid dioxygenase 4) HSP 1 Score: 85.1 bits (209), Expect = 3.6e-17 Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 0
BLAST of MELO3C013241.2 vs. Swiss-Prot
Match: sp|Q84KG5|CCD_CROSA (Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus OX=82528 GN=CCD PE=1 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 4.0e-58 Identity = 106/132 (80.30%), Postives = 118/132 (89.39%), Query Frame = 0
BLAST of MELO3C013241.2 vs. Swiss-Prot
Match: sp|O65572|CCD1_ARATH (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis thaliana OX=3702 GN=CCD1 PE=1 SV=2) HSP 1 Score: 223.0 bits (567), Expect = 2.0e-57 Identity = 101/132 (76.52%), Postives = 117/132 (88.64%), Query Frame = 0
BLAST of MELO3C013241.2 vs. Swiss-Prot
Match: sp|Q8LP17|CCD1_PEA (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum OX=3888 GN=CCD1 PE=2 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 1.3e-56 Identity = 105/132 (79.55%), Postives = 114/132 (86.36%), Query Frame = 0
BLAST of MELO3C013241.2 vs. Swiss-Prot
Match: sp|Q94IR2|CCD1_PHAVU (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus vulgaris OX=3885 GN=CCD1 PE=1 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.1e-55 Identity = 100/132 (75.76%), Postives = 115/132 (87.12%), Query Frame = 0
BLAST of MELO3C013241.2 vs. Swiss-Prot
Match: sp|C3VEQ4|CCD1_ONCHC (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Oncidium hybrid cultivar OX=141207 GN=CCD1 PE=2 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 5.4e-55 Identity = 100/132 (75.76%), Postives = 116/132 (87.88%), Query Frame = 0
BLAST of MELO3C013241.2 vs. TrEMBL
Match: tr|A0A1S3CFM3|A0A1S3CFM3_CUCME (carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Cucumis melo OX=3656 GN=LOC103499930 PE=3 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 3.6e-64 Identity = 122/132 (92.42%), Postives = 126/132 (95.45%), Query Frame = 0
BLAST of MELO3C013241.2 vs. TrEMBL
Match: tr|Q0H394|Q0H394_CUCME (Carotenoid cleavage dioxygenase (Fragment) OS=Cucumis melo OX=3656 PE=2 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 3.6e-64 Identity = 122/132 (92.42%), Postives = 126/132 (95.45%), Query Frame = 0
BLAST of MELO3C013241.2 vs. TrEMBL
Match: tr|A0A0A0K8B3|A0A0A0K8B3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428120 PE=3 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 4.0e-63 Identity = 120/132 (90.91%), Postives = 125/132 (94.70%), Query Frame = 0
BLAST of MELO3C013241.2 vs. TrEMBL
Match: tr|K4K0F3|K4K0F3_MOMCH (Carotenoid cleavage dioxygenase 1 OS=Momordica charantia OX=3673 GN=CCD1 PE=2 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 3.4e-62 Identity = 118/132 (89.39%), Postives = 124/132 (93.94%), Query Frame = 0
BLAST of MELO3C013241.2 vs. TrEMBL
Match: tr|G3LUM8|G3LUM8_CUCMO (Carotenoid cleavage dioxygenase (Fragment) OS=Cucurbita moschata OX=3662 GN=CCD PE=2 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 2.2e-61 Identity = 116/132 (87.88%), Postives = 124/132 (93.94%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|