CsGy7G008880 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCTCCCACCGTTCCTTCTTCAACTTAACAATGCTTCTTCTCTTCTTCCTCTCACTGCTTTTCACTTTTTCTTCCTCTGCTTTCATTTCAGGTAACTTCACCAGATTCAAAATCACCGCCACTTTCTCTATTTTCCCTCTTCTTCTCTATTTCTCTCCTTGACCCTCCTTTTTATGTTTTCCAGGACATGCCTTTGAATCCAACCCTTCAATCGGTCGGAACCTCCTACAGGCTAAAAAAGGTTCCACCCCTTCCTCTCTTTAACATCTTTTTCTCTTTTCTTTTTTCTGACTTCTTTGTCTAGCTTAGTTTAGTTGTACGCATGTTTCAGCTGTTAGGTTTTGAAAGCTCTATTTTATTTATGCTTCTTTTCTTTCTATAAGATCTTCCCGATCTGTGTTTCTTCTCTCTCGTGGTTGTGTGGAATTGGGGGTTACTAGATATCGCTTCTGTTGGTTTCAGTTTGACCATTTGATTCTCTTGTTTTCTCTTCCTGTTCTACTACTCACGACCGTTCTGTAAAAAGGAAATTCACCCGAAATAGTGACTAAATTTTAATTTTCATTATTATCGTATTGGGTTGATCTGTCCGTGATTTACGCTCTGATTCAATAACATTAAAACGGAGGAAAAAAAGTATGTTGCATAAAGTTGCAAAAATTGTGGGTATTAACTGAAGATGAAGATTAGTTGATGTTCATTCTGTTTTAATACTGTTGGATTCTCATCATATGGTAAGCCAGCTGAAGATGAAGATTCTAAATCTGGCGTCTCATTACTTTCTTATGAGAAAACAACTGAATCGTTAGTTGAATGATCTGGGATTATGGCTTTAACATTTTCGTATCTGGTCAGTTGAGCTAGTTGTATGTTGTAAAAGTTCTATCTATACATTGGATTATAAAGTACAGTTATAACTTATATTATAAGGTAATGTAAGTCCAATATAGTAATTTTGTTACATTCATTTGGTTAACTAAATTGATTAAGAAATTAATATTCTTTGTTTTTTATCACTTAATACGTATGTGAAGATAAAAAAAAGTAGCCTCTTAAAAAGTTATATTCTATGGTCTCTGTTGTCTATACCTCCTGCCGGCCTTGTTTGTTTAGATTTTGGCTTTTAATTTAATTTTGTATTAGTGATGTGTTACATAGCATAGGTTTGTAGAAGAACTATTTTGAGATTTGAATAATTTTTTTCTTTTCTTCCCAGAAATCTTCATATTATGTGCATGTGCATTTAGAAAATGAAATAATTAGTTTATGTGCAGTTTTTATCCAAGTGTATAGATGTTTTTCTCCTGGACACAAATTAAAGAACTAACGATAATTTATTTAGCTTTTGATTAGAGATCTGCCACGTTTCCCTTTATGTTCCATTTCTTTTGTCCATATATTAAGCATATGACAATTGATAATCTTTTAGATGAGTGTATTCAAGAGGAATGAGCAGTTTTTGGTGCATACCTCTGTCTTTCATGGAGGAGAAAAGGATCTCTTGATGTTGTTTTGAAATTGCTAGAATTTGATGACTACATATTTTGTGTGGAAAATCATTAGATTGCTAAATCCCCACTTGTTATTAGTGGTCATAATCATATTAGCTTATTACTCATCACGCTTAACCTTTCCAGATTTCAAATAGAAGTTTGAAAACTTTGTAGTGGTATTTTTGCTTACATTATCTGTGCCCTACCGGTGATTTCTACTTTCTGAAGCTACTCTAAAACTAACTTGATCTAATCATGTAATGTTGCACAATTTACGCAGCTTGTCCAGTGAACTTTGAATTCTTAAACTACACAATCATCACAAGCAAGTGCAAGGGGCCTCGATACCCTCCCAAGTTCTGTTGTTCAGCTTTGAAAGAATTTGCTTGCCCTTATGTCGAAGATCTCAATGATTTAACAAATGATTGTGCTTCGACCATGTTCAGTTACATTAACTTGTATGGAAAATACCCTCCTGGTCTCTTCTCTAGCGAGTGCAAGGAGGGGAAGGAAGGTCTAGAGTGCCCTGCACTCCCACCCTCCACTTCAGCTGATCTAAGTTGGGGCTCGAAAACAAGCTTACCATCGTATTCACTGATTCTCTTAACTGGATTCGTACTGCTGGTACGGCTATTATGA ATGCTCTCCCACCGTTCCTTCTTCAACTTAACAATGCTTCTTCTCTTCTTCCTCTCACTGCTTTTCACTTTTTCTTCCTCTGCTTTCATTTCAGGACATGCCTTTGAATCCAACCCTTCAATCGGTCGGAACCTCCTACAGGCTAAAAAAGCTTGTCCAGTGAACTTTGAATTCTTAAACTACACAATCATCACAAGCAAGTGCAAGGGGCCTCGATACCCTCCCAAGTTCTGTTGTTCAGCTTTGAAAGAATTTGCTTGCCCTTATGTCGAAGATCTCAATGATTTAACAAATGATTGTGCTTCGACCATGTTCAGTTACATTAACTTGTATGGAAAATACCCTCCTGGTCTCTTCTCTAGCGAGTGCAAGGAGGGGAAGGAAGGTCTAGAGTGCCCTGCACTCCCACCCTCCACTTCAGCTGATCTAAGTTGGGGCTCGAAAACAAGCTTACCATCGTATTCACTGATTCTCTTAACTGGATTCGTACTGCTGGTACGGCTATTATGA ATGCTCTCCCACCGTTCCTTCTTCAACTTAACAATGCTTCTTCTCTTCTTCCTCTCACTGCTTTTCACTTTTTCTTCCTCTGCTTTCATTTCAGGACATGCCTTTGAATCCAACCCTTCAATCGGTCGGAACCTCCTACAGGCTAAAAAAGCTTGTCCAGTGAACTTTGAATTCTTAAACTACACAATCATCACAAGCAAGTGCAAGGGGCCTCGATACCCTCCCAAGTTCTGTTGTTCAGCTTTGAAAGAATTTGCTTGCCCTTATGTCGAAGATCTCAATGATTTAACAAATGATTGTGCTTCGACCATGTTCAGTTACATTAACTTGTATGGAAAATACCCTCCTGGTCTCTTCTCTAGCGAGTGCAAGGAGGGGAAGGAAGGTCTAGAGTGCCCTGCACTCCCACCCTCCACTTCAGCTGATCTAAGTTGGGGCTCGAAAACAAGCTTACCATCGTATTCACTGATTCTCTTAACTGGATTCGTACTGCTGGTACGGCTATTATGA MLSHRSFFNLTMLLLFFLSLLFTFSSSAFISGHAFESNPSIGRNLLQAKKACPVNFEFLNYTIITSKCKGPRYPPKFCCSALKEFACPYVEDLNDLTNDCASTMFSYINLYGKYPPGLFSSECKEGKEGLECPALPPSTSADLSWGSKTSLPSYSLILLTGFVLLVRLL
BLAST of CsGy7G008880 vs. NCBI nr
Match: XP_004139762.1 (PREDICTED: GPI-anchored protein LORELEI [Cucumis sativus] >KGN44100.1 hypothetical protein Csa_7G186190 [Cucumis sativus]) HSP 1 Score: 341.7 bits (875), Expect = 1.5e-90 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
BLAST of CsGy7G008880 vs. NCBI nr
Match: XP_008447799.1 (PREDICTED: GPI-anchored protein LORELEI-like [Cucumis melo]) HSP 1 Score: 319.3 bits (817), Expect = 7.8e-84 Identity = 159/169 (94.08%), Postives = 162/169 (95.86%), Query Frame = 0
BLAST of CsGy7G008880 vs. NCBI nr
Match: XP_022976292.1 (GPI-anchored protein LLG1-like [Cucurbita maxima]) HSP 1 Score: 271.6 bits (693), Expect = 1.9e-69 Identity = 136/169 (80.47%), Postives = 148/169 (87.57%), Query Frame = 0
BLAST of CsGy7G008880 vs. NCBI nr
Match: XP_022936417.1 (GPI-anchored protein LLG1 [Cucurbita moschata]) HSP 1 Score: 270.0 bits (689), Expect = 5.4e-69 Identity = 136/169 (80.47%), Postives = 147/169 (86.98%), Query Frame = 0
BLAST of CsGy7G008880 vs. NCBI nr
Match: XP_023536509.1 (GPI-anchored protein LLG1-like [Cucurbita pepo subsp. pepo] >XP_023536510.1 GPI-anchored protein LLG1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 269.2 bits (687), Expect = 9.2e-69 Identity = 134/168 (79.76%), Postives = 146/168 (86.90%), Query Frame = 0
BLAST of CsGy7G008880 vs. TAIR10
Match: AT5G56170.1 (LORELEI-LIKE-GPI-ANCHORED PROTEIN 1) HSP 1 Score: 202.6 bits (514), Expect = 1.9e-52 Identity = 104/165 (63.03%), Postives = 127/165 (76.97%), Query Frame = 0
BLAST of CsGy7G008880 vs. TAIR10
Match: AT4G28280.2 (LORELEI-LIKE-GPI ANCHORED PROTEIN 3) HSP 1 Score: 161.4 bits (407), Expect = 4.9e-40 Identity = 84/153 (54.90%), Postives = 105/153 (68.63%), Query Frame = 0
BLAST of CsGy7G008880 vs. TAIR10
Match: AT4G26466.1 (lorelei) HSP 1 Score: 159.1 bits (401), Expect = 2.4e-39 Identity = 74/141 (52.48%), Postives = 99/141 (70.21%), Query Frame = 0
BLAST of CsGy7G008880 vs. TAIR10
Match: AT2G20700.1 (LORELEI-LIKE-GPI ANCHORED PROTEIN 2) HSP 1 Score: 151.4 bits (381), Expect = 5.1e-37 Identity = 80/152 (52.63%), Postives = 101/152 (66.45%), Query Frame = 0
BLAST of CsGy7G008880 vs. Swiss-Prot
Match: sp|Q9FKT1|LLG1_ARATH (GPI-anchored protein LLG1 OS=Arabidopsis thaliana OX=3702 GN=LLG1 PE=1 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 3.5e-51 Identity = 104/165 (63.03%), Postives = 127/165 (76.97%), Query Frame = 0
BLAST of CsGy7G008880 vs. Swiss-Prot
Match: sp|Q9M0I0|LLG3_ARATH (GPI-anchored protein LLG2 OS=Arabidopsis thaliana OX=3702 GN=LLG3 PE=2 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 8.9e-39 Identity = 84/153 (54.90%), Postives = 105/153 (68.63%), Query Frame = 0
BLAST of CsGy7G008880 vs. Swiss-Prot
Match: sp|B3GS44|LRE_ARATH (GPI-anchored protein LORELEI OS=Arabidopsis thaliana OX=3702 GN=LRE PE=1 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 4.4e-38 Identity = 74/141 (52.48%), Postives = 99/141 (70.21%), Query Frame = 0
BLAST of CsGy7G008880 vs. Swiss-Prot
Match: sp|Q6NLF4|LLG2_ARATH (GPI-anchored protein LLG2 OS=Arabidopsis thaliana OX=3702 GN=LLG2 PE=2 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 9.2e-36 Identity = 80/152 (52.63%), Postives = 101/152 (66.45%), Query Frame = 0
BLAST of CsGy7G008880 vs. TrEMBL
Match: tr|A0A0A0K362|A0A0A0K362_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G186190 PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 9.7e-91 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
BLAST of CsGy7G008880 vs. TrEMBL
Match: tr|A0A1S3BIW0|A0A1S3BIW0_CUCME (GPI-anchored protein LORELEI-like OS=Cucumis melo OX=3656 GN=LOC103490187 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 5.1e-84 Identity = 159/169 (94.08%), Postives = 162/169 (95.86%), Query Frame = 0
BLAST of CsGy7G008880 vs. TrEMBL
Match: tr|A0A2R6QT18|A0A2R6QT18_ACTCH (GPI-anchored protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc33519 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 3.3e-54 Identity = 109/159 (68.55%), Postives = 127/159 (79.87%), Query Frame = 0
BLAST of CsGy7G008880 vs. TrEMBL
Match: tr|A0A1S3U1F3|A0A1S3U1F3_VIGRR (GPI-anchored protein LORELEI-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106760909 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 5.2e-52 Identity = 104/163 (63.80%), Postives = 122/163 (74.85%), Query Frame = 0
BLAST of CsGy7G008880 vs. TrEMBL
Match: tr|E0CTD1|E0CTD1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03800 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 2.0e-51 Identity = 107/162 (66.05%), Postives = 128/162 (79.01%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|