CsGy6G019070.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGATAAGGCTAAATTTGTAAATTTGAAAATAAAAGGTTTGATGGACTAATAGACACAAACCTTGAAATTCGGAGTCTTTGAATTTAACCTTTTAATATTGTATCGTAATAGCAGAATATATTATGTTTGAGACCATACTCGAAACCCTATAATGTGAAGGAAGTAAAAGTTTAAAATATGATTGCAGGAGTTACTACAGGTGCACAAACAGCAAATGCACAGTAAAAAAAAGGGTAGAACGGTCGTGTGAAGATTCAAGCGTTGTAATAACAACATATGAAGGCCAACATTGCCATCACACCGTTGGATTCCCTCGAGGTGGATTAACCATAGCTCATGAAACTTCTTTTGGGTCTCAATTTTCACCTCAAATCCCACATTTTTTTTACCCTGATCCACCACCACCACCAACAACAACTAATAACCATAACCCTCCCACACCTCCCATTGACCAACCACTACACCATTTCCCCAGCACTCCTAGTTCGACTGAACAACAAGAACCACCAAACTCAAATCTCCAACAACTTCCTTCCAACGAAGGCTTGCTCGGTGCCATTGTCCCCCATGCCATGATGCGTAGAACAACATGA ATGCTGATAAGGCTAAATTTGAGTTACTACAGGTGCACAAACAGCAAATGCACAGTAAAAAAAAGGGTAGAACGGTCGTGTGAAGATTCAAGCGTTGTAATAACAACATATGAAGGCCAACATTGCCATCACACCGTTGGATTCCCTCGAGGTGGATTAACCATAGCTCATGAAACTTCTTTTGGGTCTCAATTTTCACCTCAAATCCCACATTTTTTTTACCCTGATCCACCACCACCACCAACAACAACTAATAACCATAACCCTCCCACACCTCCCATTGACCAACCACTACACCATTTCCCCAGCACTCCTAGTTCGACTGAACAACAAGAACCACCAAACTCAAATCTCCAACAACTTCCTTCCAACGAAGGCTTGCTCGGTGCCATTGTCCCCCATGCCATGATGCGTAGAACAACATGA ATGCTGATAAGGCTAAATTTGAGTTACTACAGGTGCACAAACAGCAAATGCACAGTAAAAAAAAGGGTAGAACGGTCGTGTGAAGATTCAAGCGTTGTAATAACAACATATGAAGGCCAACATTGCCATCACACCGTTGGATTCCCTCGAGGTGGATTAACCATAGCTCATGAAACTTCTTTTGGGTCTCAATTTTCACCTCAAATCCCACATTTTTTTTACCCTGATCCACCACCACCACCAACAACAACTAATAACCATAACCCTCCCACACCTCCCATTGACCAACCACTACACCATTTCCCCAGCACTCCTAGTTCGACTGAACAACAAGAACCACCAAACTCAAATCTCCAACAACTTCCTTCCAACGAAGGCTTGCTCGGTGCCATTGTCCCCCATGCCATGATGCGTAGAACAACATGA MLIRLNLSYYRCTNSKCTVKKRVERSCEDSSVVITTYEGQHCHHTVGFPRGGLTIAHETSFGSQFSPQIPHFFYPDPPPPPTTTNNHNPPTPPIDQPLHHFPSTPSSTEQQEPPNSNLQQLPSNEGLLGAIVPHAMMRRTT
BLAST of CsGy6G019070.1 vs. NCBI nr
Match: KGN47639.1 (hypothetical protein Csa_6G366370 [Cucumis sativus]) HSP 1 Score: 172.9 bits (437), Expect = 7.5e-40 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. NCBI nr
Match: XP_011658445.1 (PREDICTED: probable WRKY transcription factor 57, partial [Cucumis sativus]) HSP 1 Score: 172.9 bits (437), Expect = 7.5e-40 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. NCBI nr
Match: XP_008445467.1 (PREDICTED: probable WRKY transcription factor 57 isoform X1 [Cucumis melo]) HSP 1 Score: 160.6 bits (405), Expect = 3.9e-36 Identity = 131/135 (97.04%), Postives = 131/135 (97.04%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. NCBI nr
Match: XP_008445469.1 (PREDICTED: probable WRKY transcription factor 57 isoform X2 [Cucumis melo]) HSP 1 Score: 160.6 bits (405), Expect = 3.9e-36 Identity = 131/135 (97.04%), Postives = 131/135 (97.04%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. NCBI nr
Match: XP_023546080.1 (probable WRKY transcription factor 57 [Cucurbita pepo subsp. pepo] >XP_023546081.1 probable WRKY transcription factor 57 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 125.6 bits (314), Expect = 1.4e-25 Identity = 106/139 (76.26%), Postives = 112/139 (80.58%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. TAIR10
Match: AT1G69310.1 (WRKY DNA-binding protein 57) HSP 1 Score: 96.3 bits (238), Expect = 1.6e-20 Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. TAIR10
Match: AT1G29860.1 (WRKY DNA-binding protein 71) HSP 1 Score: 64.3 bits (155), Expect = 6.8e-11 Identity = 30/50 (60.00%), Postives = 34/50 (68.00%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. TAIR10
Match: AT4G18170.1 (WRKY DNA-binding protein 28) HSP 1 Score: 62.4 bits (150), Expect = 2.6e-10 Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. TAIR10
Match: AT5G49520.1 (WRKY DNA-binding protein 48) HSP 1 Score: 61.6 bits (148), Expect = 4.4e-10 Identity = 29/44 (65.91%), Postives = 32/44 (72.73%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. TAIR10
Match: AT2G47260.1 (WRKY DNA-binding protein 23) HSP 1 Score: 60.1 bits (144), Expect = 1.3e-09 Identity = 26/36 (72.22%), Postives = 28/36 (77.78%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. Swiss-Prot
Match: sp|Q9C983|WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana OX=3702 GN=WRKY57 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.9e-19 Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. Swiss-Prot
Match: sp|Q93WV4|WRK71_ARATH (WRKY transcription factor 71 OS=Arabidopsis thaliana OX=3702 GN=WRKY71 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09 Identity = 30/50 (60.00%), Postives = 34/50 (68.00%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. Swiss-Prot
Match: sp|Q8VWJ2|WRK28_ARATH (WRKY transcription factor 28 OS=Arabidopsis thaliana OX=3702 GN=WRKY28 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 4.7e-09 Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. Swiss-Prot
Match: sp|Q9FGZ4|WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana OX=3702 GN=WRKY48 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 8.0e-09 Identity = 29/44 (65.91%), Postives = 32/44 (72.73%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. Swiss-Prot
Match: sp|O22900|WRK23_ARATH (WRKY transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=WRKY23 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.3e-08 Identity = 26/36 (72.22%), Postives = 28/36 (77.78%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. TrEMBL
Match: tr|A0A0A0KFM3|A0A0A0KFM3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G366370 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 5.0e-40 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. TrEMBL
Match: tr|A0A1S3BDM9|A0A1S3BDM9_CUCME (probable WRKY transcription factor 57 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488478 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.6e-36 Identity = 131/135 (97.04%), Postives = 131/135 (97.04%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. TrEMBL
Match: tr|A0A1S3BCT3|A0A1S3BCT3_CUCME (probable WRKY transcription factor 57 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488478 PE=4 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.6e-36 Identity = 131/135 (97.04%), Postives = 131/135 (97.04%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. TrEMBL
Match: tr|A0A2K3N136|A0A2K3N136_TRIPR (WRKY transcription factor (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g019911 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 5.5e-23 Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 0
BLAST of CsGy6G019070.1 vs. TrEMBL
Match: tr|G7JXY4|G7JXY4_MEDTR (WRKY family transcription factor OS=Medicago truncatula OX=3880 GN=11433776 PE=4 SV=2) HSP 1 Score: 111.7 bits (278), Expect = 1.4e-21 Identity = 51/65 (78.46%), Postives = 58/65 (89.23%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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