CsGy6G010360.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTAAGTTAACAACATCCCATTTCCATTCATTTTATATATAAATATAAGCATTTATATAACCTGTAAACACATTAATTATTAGGATCACAGCTTATTCCATGGCGGATAAAGCTCATCATCATAGCTTCCATGGCCAACTCCCTGGCTTTAGATTCCACCCAACTGAAGAAGAGCTTCTTGAATTCTATCTCAAGCAAATGGTTTTTGGGAAACGCCGACATAGCTTCGATGTTATTACATTTCTCAACATTTACCAACACGACCCTTGGGATTTACCTGGTATTACTTAATTTATGTTTCTTTCTTTCTTTTTCTCTTTCTTTCTTCTTCAAAAGGATTAATTTGTTTGATTTAATTTTAACTTTTGTAGATTTGGCGAAGAATGGTGAGAGAGAGTGGTATTTCTTTGTACCAAGAGATAGAAAGCACGGCGGTTGTGGCGGGGGGCGGCCTAATCGGACGACCGGAATTGGGTACTGGAAAGCCACGGGGTCGGACAGGAGAATTTTGAGCTTCTCGGATCCAAAGAGATTTATTGGTTTAAGGAAAACTCTTGTTTTCTACAAAGGAAGAGCTCCTAGAGGAACCAAGACTGATTGGATCATGAACGAGTATCGTCTTCCTCACAATTCTTCTCTTCCAGTAATGGTAATAAAATTCATCTGCTTAACCTTCGTAAACCTTTAAATATTTGAGTTAAGAAACGGGAATCATTGAACATTTATGTGTCAAAAATATAATGAATAAAAGAAACACAAAGTTTTCTTTTGGTGGCTAAAAGGGTGGATTAATACACAGTATATGCAAAGCGTTGTTTTTAAAAAGATTAAAAGTAGGGTTTAATAATGATAATATTTTTTTAAAGAAACGTAATTTGATTTGCAGGACATAGTGCTTTGCAAGATATATAGAAAAGCAACATCAATGAAGGTGTTGGAGCAAAGGGCAGTGGAGGAAGAGACAAAGAACTTGCAAATTAATAATAATACTACAATAATATTAACACCTGCATTAATGAGTGAAGAAGAACAAGGTGATGATCAAGACTCATTTTGCACTCGAAGTATTCCAAGGCTGAATTCAAGTGAAGTAGTGGCAATGAAAGAAGAGATAAGTTGTGGGGAAGAAGAAGAAGTTGATTCAAAGGTGGCCGACGTAGGGTCATCGTCTTTGTCATTGTCGACGACAAGCATACAAATACCCAAAGGCTTTGGCATGCTGACTGATCTTCAAGTTCCAAAGATGACAATGGATTGGACTCAAGACCAATTTTGGAACCAATTCAATAGTCCATGGCTTCTCAATTTCACAACTCCTAGCAATATACTTAATTTCTAAGAAGCTAAATATTTATGCCTGATTTTGTGAACAACGCAAAATTTAGTTATATTGTACGTAGGTTCTTTCTCTATGGTCTCCCACACATTTTAACTTTAACTTGGAAATTGGGTTTAGCTTGTTTATTTCTATGCATGAAACATGATACTGTTTCATATATTGGTTAATTAATTGGATGCAATTTTGACCATTTAAACTTCAAAGTGGAAAATTTTACTAAAATATAATAAATGAATTGCAAAAGGTCGAGTACAAACAAGATACACCTAAGTATTAAAGCGATATATACTAAAGCAAGTATGGTATATATACTTTTTGAAGTTATAACGTACCTTGAAATGATTTATATCATAAATTACGAAGCTATGTTCGTATTCTAAGACAGGAAAATATCTACCAATACTGTTCGTTCTCCTTCCACCAACCACACAATTTCCTTTTCTTTCTTCCTTTCATATGTAAGAAAATTAAAAAAGGGTCCATGATGATGGAACCTTTGACAAAGAAAATTTTGTTTCAAAGTTAATTGTAATCTTCCTCTCCCAATTGGCGATGGAAATTATTCAAGGGCCCATGGGATCTTCAAAAGTGGAAGGATTTGTTTGAAC CACTAAGTTAACAACATCCCATTTCCATTCATTTTATATATAAATATAAGCATTTATATAACCTGTAAACACATTAATTATTAGGATCACAGCTTATTCCATGGCGGATAAAGCTCATCATCATAGCTTCCATGGCCAACTCCCTGGCTTTAGATTCCACCCAACTGAAGAAGAGCTTCTTGAATTCTATCTCAAGCAAATGGTTTTTGGGAAACGCCGACATAGCTTCGATGTTATTACATTTCTCAACATTTACCAACACGACCCTTGGGATTTACCTGATTTGGCGAAGAATGGTGAGAGAGAGTGGTATTTCTTTGTACCAAGAGATAGAAAGCACGGCGGTTGTGGCGGGGGGCGGCCTAATCGGACGACCGGAATTGGGTACTGGAAAGCCACGGGGTCGGACAGGAGAATTTTGAGCTTCTCGGATCCAAAGAGATTTATTGGTTTAAGGAAAACTCTTGTTTTCTACAAAGGAAGAGCTCCTAGAGGAACCAAGACTGATTGGATCATGAACGAGTATCGTCTTCCTCACAATTCTTCTCTTCCAGTAATGGACATAGTGCTTTGCAAGATATATAGAAAAGCAACATCAATGAAGGTGTTGGAGCAAAGGGCAGTGGAGGAAGAGACAAAGAACTTGCAAATTAATAATAATACTACAATAATATTAACACCTGCATTAATGAGTGAAGAAGAACAAGGTGATGATCAAGACTCATTTTGCACTCGAAGTATTCCAAGGCTGAATTCAAGTGAAGTAGTGGCAATGAAAGAAGAGATAAGTTGTGGGGAAGAAGAAGAAGTTGATTCAAAGGTGGCCGACGTAGGGTCATCGTCTTTGTCATTGTCGACGACAAGCATACAAATACCCAAAGGCTTTGGCATGCTGACTGATCTTCAAGTTCCAAAGATGACAATGGATTGGACTCAAGACCAATTTTGGAACCAATTCAATAGTCCATGGCTTCTCAATTTCACAACTCCTAGCAATATACTTAATTTCTAAGAAGCTAAATATTTATGCCTGATTTTGTGAACAACGCAAAATTTAGTTATATTGTACGTAGGTTCTTTCTCTATGGTCTCCCACACATTTTAACTTTAACTTGGAAATTGGGTTTAGCTTGTTTATTTCTATGCATGAAACATGATACTGTTTCATATATTGGTTAATTAATTGGATGCAATTTTGACCATTTAAACTTCAAAGTGGAAAATTTTACTAAAATATAATAAATGAATTGCAAAAGGTCGAGTACAAACAAGATACACCTAAGTATTAAAGCGATATATACTAAAGCAAGTATGGTATATATACTTTTTGAAGTTATAACGTACCTTGAAATGATTTATATCATAAATTACGAAGCTATGTTCGTATTCTAAGACAGGAAAATATCTACCAATACTGTTCGTTCTCCTTCCACCAACCACACAATTTCCTTTTCTTTCTTCCTTTCATATGTAAGAAAATTAAAAAAGGGTCCATGATGATGGAACCTTTGACAAAGAAAATTTTGTTTCAAAGTTAATTGTAATCTTCCTCTCCCAATTGGCGATGGAAATTATTCAAGGGCCCATGGGATCTTCAAAAGTGGAAGGATTTGTTTGAAC ATGGCGGATAAAGCTCATCATCATAGCTTCCATGGCCAACTCCCTGGCTTTAGATTCCACCCAACTGAAGAAGAGCTTCTTGAATTCTATCTCAAGCAAATGGTTTTTGGGAAACGCCGACATAGCTTCGATGTTATTACATTTCTCAACATTTACCAACACGACCCTTGGGATTTACCTGATTTGGCGAAGAATGGTGAGAGAGAGTGGTATTTCTTTGTACCAAGAGATAGAAAGCACGGCGGTTGTGGCGGGGGGCGGCCTAATCGGACGACCGGAATTGGGTACTGGAAAGCCACGGGGTCGGACAGGAGAATTTTGAGCTTCTCGGATCCAAAGAGATTTATTGGTTTAAGGAAAACTCTTGTTTTCTACAAAGGAAGAGCTCCTAGAGGAACCAAGACTGATTGGATCATGAACGAGTATCGTCTTCCTCACAATTCTTCTCTTCCAGTAATGGACATAGTGCTTTGCAAGATATATAGAAAAGCAACATCAATGAAGGTGTTGGAGCAAAGGGCAGTGGAGGAAGAGACAAAGAACTTGCAAATTAATAATAATACTACAATAATATTAACACCTGCATTAATGAGTGAAGAAGAACAAGGTGATGATCAAGACTCATTTTGCACTCGAAGTATTCCAAGGCTGAATTCAAGTGAAGTAGTGGCAATGAAAGAAGAGATAAGTTGTGGGGAAGAAGAAGAAGTTGATTCAAAGGTGGCCGACGTAGGGTCATCGTCTTTGTCATTGTCGACGACAAGCATACAAATACCCAAAGGCTTTGGCATGCTGACTGATCTTCAAGTTCCAAAGATGACAATGGATTGGACTCAAGACCAATTTTGGAACCAATTCAATAGTCCATGGCTTCTCAATTTCACAACTCCTAGCAATATACTTAATTTCTAA MADKAHHHSFHGQLPGFRFHPTEEELLEFYLKQMVFGKRRHSFDVITFLNIYQHDPWDLPDLAKNGEREWYFFVPRDRKHGGCGGGRPNRTTGIGYWKATGSDRRILSFSDPKRFIGLRKTLVFYKGRAPRGTKTDWIMNEYRLPHNSSLPVMDIVLCKIYRKATSMKVLEQRAVEEETKNLQINNNTTIILTPALMSEEEQGDDQDSFCTRSIPRLNSSEVVAMKEEISCGEEEEVDSKVADVGSSSLSLSTTSIQIPKGFGMLTDLQVPKMTMDWTQDQFWNQFNSPWLLNFTTPSNILNF
BLAST of CsGy6G010360.1 vs. NCBI nr
Match: XP_011656937.1 (PREDICTED: NAC domain-containing protein 67-like [Cucumis sativus] >KGN46720.1 hypothetical protein Csa_6G127320 [Cucumis sativus]) HSP 1 Score: 582.8 bits (1501), Expect = 6.8e-163 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. NCBI nr
Match: XP_008448321.1 (PREDICTED: LOW QUALITY PROTEIN: NAC transcription factor 29-like [Cucumis melo]) HSP 1 Score: 554.3 bits (1427), Expect = 2.6e-154 Identity = 270/305 (88.52%), Postives = 278/305 (91.15%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. NCBI nr
Match: XP_022985752.1 (NAC transcription factor 29-like [Cucurbita maxima]) HSP 1 Score: 463.0 bits (1190), Expect = 7.8e-127 Identity = 240/317 (75.71%), Postives = 256/317 (80.76%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. NCBI nr
Match: XP_023512193.1 (NAC domain-containing protein 22-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 438.0 bits (1125), Expect = 2.7e-119 Identity = 228/320 (71.25%), Postives = 240/320 (75.00%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. NCBI nr
Match: XP_022943436.1 (NAC transcription factor 29-like [Cucurbita moschata]) HSP 1 Score: 431.4 bits (1108), Expect = 2.5e-117 Identity = 225/321 (70.09%), Postives = 238/321 (74.14%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. TAIR10
Match: AT2G17040.1 (NAC domain containing protein 36) HSP 1 Score: 280.4 bits (716), Expect = 1.3e-75 Identity = 154/288 (53.47%), Postives = 194/288 (67.36%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. TAIR10
Match: AT2G02450.2 (NAC domain containing protein 35) HSP 1 Score: 194.9 bits (494), Expect = 7.2e-50 Identity = 93/163 (57.06%), Postives = 123/163 (75.46%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. TAIR10
Match: AT5G39820.1 (NAC domain containing protein 94) HSP 1 Score: 173.3 bits (438), Expect = 2.2e-43 Identity = 85/143 (59.44%), Postives = 106/143 (74.13%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. TAIR10
Match: AT1G26870.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 167.5 bits (423), Expect = 1.2e-41 Identity = 87/177 (49.15%), Postives = 115/177 (64.97%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. TAIR10
Match: AT1G69490.1 (NAC-like, activated by AP3/PI) HSP 1 Score: 159.8 bits (403), Expect = 2.6e-39 Identity = 84/181 (46.41%), Postives = 114/181 (62.98%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. Swiss-Prot
Match: sp|Q10S65|NAC22_ORYSJ (NAC domain-containing protein 22 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC022 PE=2 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 2.4e-63 Identity = 119/167 (71.26%), Postives = 134/167 (80.24%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. Swiss-Prot
Match: sp|Q9ZVP8|NAC35_ARATH (NAC domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=NAC035 PE=1 SV=2) HSP 1 Score: 194.9 bits (494), Expect = 1.3e-48 Identity = 93/163 (57.06%), Postives = 123/163 (75.46%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. Swiss-Prot
Match: sp|Q9FIW5|NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana OX=3702 GN=ANAC094 PE=3 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 4.0e-42 Identity = 85/143 (59.44%), Postives = 106/143 (74.13%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. Swiss-Prot
Match: sp|Q9ZVH0|FEZ_ARATH (Protein FEZ OS=Arabidopsis thaliana OX=3702 GN=FEZ PE=2 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.2e-40 Identity = 87/177 (49.15%), Postives = 115/177 (64.97%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. Swiss-Prot
Match: sp|Q75HE5|NAC2_ORYSJ (NAC domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC002 PE=1 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.4e-39 Identity = 84/178 (47.19%), Postives = 115/178 (64.61%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. TrEMBL
Match: tr|A0A0A0KAG5|A0A0A0KAG5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G127320 PE=4 SV=1) HSP 1 Score: 582.8 bits (1501), Expect = 4.5e-163 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. TrEMBL
Match: tr|A0A1S3BJF6|A0A1S3BJF6_CUCME (LOW QUALITY PROTEIN: NAC transcription factor 29-like OS=Cucumis melo OX=3656 GN=LOC103490549 PE=4 SV=1) HSP 1 Score: 554.3 bits (1427), Expect = 1.7e-154 Identity = 270/305 (88.52%), Postives = 278/305 (91.15%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. TrEMBL
Match: tr|A0A2N9I2V5|A0A2N9I2V5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48258 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 1.6e-88 Identity = 175/291 (60.14%), Postives = 203/291 (69.76%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. TrEMBL
Match: tr|A0A2I4GZ82|A0A2I4GZ82_9ROSI (NAC domain-containing protein 35-like OS=Juglans regia OX=51240 GN=LOC109012146 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 8.9e-87 Identity = 177/292 (60.62%), Postives = 202/292 (69.18%), Query Frame = 0
BLAST of CsGy6G010360.1 vs. TrEMBL
Match: tr|A0A2I4GCA4|A0A2I4GCA4_9ROSI (NAC transcription factor 29-like OS=Juglans regia OX=51240 GN=LOC109006645 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 2.2e-85 Identity = 180/304 (59.21%), Postives = 203/304 (66.78%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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