CsGy5G010540.1 (mRNA) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G010540.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	AT-hook motif nuclear-localized protein 1
Location	Chr5 : 10963112 .. 10966200 (-)
Sequence length	1430

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTGATGATTATTGGACAAAAAAAAATACCATATGTAAGCATAGTTGAACCATTATTAACATAGTCTAATTAAAAACTGAAAAAGAAATATTTTATATTTCTTAAATCTGAATTTGGAGAGTCCGAATGAGCTTTAGCAAAAAAGATTTCCCAAGCTCAAGTAAAGAAAAAGAAAGTTATATATATAATTGTAGAAATAAAAAAGAAAAAGAAAAAGATCTCTATTTTTAGTCTTAAATTCTGATCTCTCCGTGCCATCAAACCACAAACCAGAGCTTAGTAGAACAGACTCAGTGTTTGTATTTTCACTTGAAGGTCAAATCTAAATCCCCCGTCCATGGAATGGAACCTCCTAATTTCTTCTCTTTTTAAATTGCTTGTTTATTTTATTTGTCGAAATTTTCTCCCTTCTTATTCTTTGATGAATTGAGATTGGAAAGAACAAAATTGGGTTTTCTTTTAATTACAGAGAAGTAAACAAATATTTATGACGGGAGGACAAGGGGATACCGGAAATGGGATTGAGGCGGTGGCTGGATCAAATAATCCAAGACCGGAGACCGCAGCTCCACCATCGGAAGGGGGTGGTCCGGCGGGTTCTGCAGCGGAGGCAGGTAAGAAGAAGAGGGGGAGACCGAGGAAGTATGGGCCGGACGGGAAGTTGAATGTGGCGGCACTGTCGCCGAAGCCCATATCGGCGTCGGCACCGGCACCGGCAGCTGTTATTGATTTCTCGGCGGAAAAACGTGGAAAAGTGCGGCCGGCGAGTTCCTTGACCAAAACCAAATATGAAGTGGAGAATTTAGGTAATAAACTTTTGACTTAAACAGTGTTGAGTTTGTGTGGACCTTTGATTTTGAGTCATATAGATGGAAGAAAAAAGGCTATAGCTATTTTGTAGGATCACTAATAACTGTTACATATAAATTCAGAGTATTTTTTCTAAGAAAAGTTTATCTCTATCATAAATAGTGAAAAATTACTAATCATATTGAAGTAACCTAATATATTCTTGAGACCTGAGGGACAACAGTTGTCCATGCTTTCTATGGTTTTTATTAAATTCCTTTTATGTTAATGAAAAAATCTCAAAGTCTTGATGTCAAGTAATCAATTAGCAGTGTGATTGGAAATCTTAATATGATCATAAAACTATTTTTGAATATGGTAGCCGACTTAGTTCATATATGAAAGATTAATTAGCTTAAACGACGATTGAAATTAATGAATGTAGATTTGCTTGCGAAATATGGTTTAGACCAGTTTAAGCACAAACATAATGCTGATTGGAAGAAAAAAAGGTCTTGATAGTAGAACTAAGTAAATTTTCAATAGACCAAAAAAAAACTTCCTTTTATCATTACTAGATCATGATAGACCTAGATTATCTAAAAGACAGAATAATATAATACAATACATCCAAATATATATCTATAATTATGTTTATGCTTATACATATTGAAAATAGTTTTACCATTTAAAATAAAATAATTTATCTTTATTAAAATGAGGGTTGAAACATAAAATCTAAATATGTGATTTTATATTATTTTAGTGAGTGTTGAGTTGAGTTATTTTTTCATTTCATTGTAGGTGAATGGGTACCTTGTTCTGTTGGTGCCAATTTTACACCCCATATCATCACCGTAAGCAGTGGGGAGGTAATTTTGTTATGAATTTTCTAAATTTTGTAGCTCAATGTTTAATTAGATTAGTCAACACATTTCTACGAGGATGTGACAATATATATAAGATGTTATTTTGTGATAATTTTAGGACGTAACAATGAAGGTTCTCTCATTCTCTCAACAAGGACCTCGAGCAATCTGCATTCTGTCTGCTAACGGCGTGATTTCGAGCGTAACGCTTCGTCAACCCGACTCCTCCGGTGGAACCTTAACATATGAGGTTATAACTTTATTAATCTCCCATTTATGCATGTATAACTGAAATGAAATAAAACATATTTGAAAATGATTATGAGAGAGTTAAACGTTAATTTTGTCATTTTAAAAATTACTCTAAAATATGTAATTTTAATCATTTTTTGTCGTATTAGCAAATATATATAGCAGAGTGCAAAATAATTTGCATATATAACAAAGTAATTTAGATCCAATTGTTGGAGTCAATCACTAGTATGAGTTTTTCATCCATAGATTGTGGTATAATTATAAATCTTTTATTAGATGATGTTATACACTTAATTATTAATCCTAATAGTATTATTCATTGCACTTAGCTGATCTTAAGTTAATTTGAGTGACTAAATACATTTTTTTAGAGTGATATTAGACATTAACAAAGTGATTTTAACAATTTCAAAATAATTATGTAATTTTAGGGTCGTTTTGAAATATTGTCGTTGTCGGGATCATTCATGCCGAGTGACAGTATAGGAACAAAGAGCAGAATTGGTGGAATGAGTGTCTCCTTAGCAAGCCCAGACGGACGAGTTGTTGGTGGTGGAGTTGCTGGTTTGTTAGTAGCTGCAAGTCCAGTTCAAGTATGTGCCTTCTCCTTTCACTACCCGTAATTTTAAACTACGAAACAAAATTTTGTTGTTTGAGCTTATATTTCTTCTTTTATTACTACTTTCGAAAATGATAGGTGGTTGTAGGAAGCTTTATATCTGGTAACCAACATGAGCAAAAGCCGAAGAAGCCAAAACACGATGTTGTATTACCGGTTTCTACATTTCCAATCTCTAGTGTTGAACCAAAATCATACAAGACGACGACAACTATGACAACATCTTCGTTTCGTGCGGAAACATGGTCACCTAATGTAGTTCCAGATTTAAGAAGTCAACCAACTGATATCAATGTATCATTAACTAGTGGTTGATATATATTGTCGTTGTATTGTTCAACCATTACTGACCACATCGTTGTCGAGGTTCTATCCTGAGTAGGTGTCATTGTTTGTTGTTTACGTTGATGGACGATTGACAATTTTTTTTTCTTTTTACAAGTAGTATTTTAGTTTTGACACTCCTTTTTAGGTAGTAATTGAAAGATATATCATTGTCTAGGGCTTCAACTATGTTACGTAATGTAGAATATATAGTTTGATTGCAAAATTCTAG

mRNA sequence

GGGTGATGATTATTGGACAAAAAAAAATACCATATGTAAGCATAGTTGAACCATTATTAACATAGTCTAATTAAAAACTGAAAAAGAAATATTTTATATTTCTTAAATCTGAATTTGGAGAGTCCGAATGAGCTTTAGCAAAAAAGATTTCCCAAGCTCAAGTAAAGAAAAAGAAAGTTATATATATAATTGTAGAAATAAAAAAGAAAAAGAAAAAGATCTCTATTTTTAGTCTTAAATTCTGATCTCTCCGTGCCATCAAACCACAAACCAGAGCTTAGTAGAACAGACTCAGTGTTTGTATTTTCACTTGAAGAGAAGTAAACAAATATTTATGACGGGAGGACAAGGGGATACCGGAAATGGGATTGAGGCGGTGGCTGGATCAAATAATCCAAGACCGGAGACCGCAGCTCCACCATCGGAAGGGGGTGGTCCGGCGGGTTCTGCAGCGGAGGCAGGTAAGAAGAAGAGGGGGAGACCGAGGAAGTATGGGCCGGACGGGAAGTTGAATGTGGCGGCACTGTCGCCGAAGCCCATATCGGCGTCGGCACCGGCACCGGCAGCTGTTATTGATTTCTCGGCGGAAAAACGTGGAAAAGTGCGGCCGGCGAGTTCCTTGACCAAAACCAAATATGAAGTGGAGAATTTAGGTGAATGGGTACCTTGTTCTGTTGGTGCCAATTTTACACCCCATATCATCACCGTAAGCAGTGGGGAGGACGTAACAATGAAGGTTCTCTCATTCTCTCAACAAGGACCTCGAGCAATCTGCATTCTGTCTGCTAACGGCGTGATTTCGAGCGTAACGCTTCGTCAACCCGACTCCTCCGGTGGAACCTTAACATATGAGAGCAGAATTGGTGGAATGAGTGTCTCCTTAGCAAGCCCAGACGGACGAGTTGTTGGTGGTGGAGTTGCTGGTTTGTTAGTAGCTGCAAGTCCAGTTCAAGTGGTTGTAGGAAGCTTTATATCTGGTAACCAACATGAGCAAAAGCCGAAGAAGCCAAAACACGATGTTGTATTACCGGTTTCTACATTTCCAATCTCTAGTGTTGAACCAAAATCATACAAGACGACGACAACTATGACAACATCTTCGTTTCGTGCGGAAACATGGTCACCTAATGTAGTTCCAGATTTAAGAAGTCAACCAACTGATATCAATGTATCATTAACTAGTGGTTGATATATATTGTCGTTGTATTGTTCAACCATTACTGACCACATCGTTGTCGAGGTTCTATCCTGAGTAGGTGTCATTGTTTGTTGTTTACGTTGATGGACGATTGACAATTTTTTTTTCTTTTTACAAGTAGTATTTTAGTTTTGACACTCCTTTTTAGGTAGTAATTGAAAGATATATCATTGTCTAGGGCTTCAACTATGTTACGTAATGTAGAATATATAGTTTGATTGCAAAATTCTAG

Coding sequence (CDS)

ATGACGGGAGGACAAGGGGATACCGGAAATGGGATTGAGGCGGTGGCTGGATCAAATAATCCAAGACCGGAGACCGCAGCTCCACCATCGGAAGGGGGTGGTCCGGCGGGTTCTGCAGCGGAGGCAGGTAAGAAGAAGAGGGGGAGACCGAGGAAGTATGGGCCGGACGGGAAGTTGAATGTGGCGGCACTGTCGCCGAAGCCCATATCGGCGTCGGCACCGGCACCGGCAGCTGTTATTGATTTCTCGGCGGAAAAACGTGGAAAAGTGCGGCCGGCGAGTTCCTTGACCAAAACCAAATATGAAGTGGAGAATTTAGGTGAATGGGTACCTTGTTCTGTTGGTGCCAATTTTACACCCCATATCATCACCGTAAGCAGTGGGGAGGACGTAACAATGAAGGTTCTCTCATTCTCTCAACAAGGACCTCGAGCAATCTGCATTCTGTCTGCTAACGGCGTGATTTCGAGCGTAACGCTTCGTCAACCCGACTCCTCCGGTGGAACCTTAACATATGAGAGCAGAATTGGTGGAATGAGTGTCTCCTTAGCAAGCCCAGACGGACGAGTTGTTGGTGGTGGAGTTGCTGGTTTGTTAGTAGCTGCAAGTCCAGTTCAAGTGGTTGTAGGAAGCTTTATATCTGGTAACCAACATGAGCAAAAGCCGAAGAAGCCAAAACACGATGTTGTATTACCGGTTTCTACATTTCCAATCTCTAGTGTTGAACCAAAATCATACAAGACGACGACAACTATGACAACATCTTCGTTTCGTGCGGAAACATGGTCACCTAATGTAGTTCCAGATTTAAGAAGTCAACCAACTGATATCAATGTATCATTAACTAGTGGTTGA

Protein sequence

MTGGQGDTGNGIEAVAGSNNPRPETAAPPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLNVAALSPKPISASAPAPAAVIDFSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTPHIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYESRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHEQKPKKPKHDVVLPVSTFPISSVEPKSYKTTTTMTTSSFRAETWSPNVVPDLRSQPTDINVSLTSG

Homology

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BLAST of CsGy5G010540.1 vs. NCBI nr
Match: XP_004149134.2 (PREDICTED: AT-hook motif nuclear-localized protein 1-like [Cucumis sativus] >KGN49574.1 hypothetical protein Csa_5G010650 [Cucumis sativus])

HSP 1 Score: 528.9 bits (1361), Expect = 1.1e-146
Identity = 283/305 (92.79%), Postives = 283/305 (92.79%), Query Frame = 0


Query: 1   MTGGQGDTGNGIEAVAGSNNPRPETAAPPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLN 60
           MTGGQGDTGNGIEAVAGSNNPRPETAAPPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLN
Sbjct: 1   MTGGQGDTGNGIEAVAGSNNPRPETAAPPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLN 60

Query: 61  VAALSPKPISASAPAPAAVIDFSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTP 120
           VAALSPKPISASAPAPAAVIDFSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTP
Sbjct: 61  VAALSPKPISASAPAPAAVIDFSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTP 120

Query: 121 HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE------- 180
           HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE       
Sbjct: 121 HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILS 180

Query: 181 --------------SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHE 240
                         SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHE
Sbjct: 181 LSGSFMPSDSIGTKSRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHE 240

Query: 241 QKPKKPKHDVVLPVSTFPISSVEPKSYKTTTTMTTSSFRAETWSPNVVPDLRSQPTDINV 285
           QKPKKPKHDVVLPV TFPISSVEPKSYKTTTTMTTSSFRAETWSPNVVPDLRSQPTDINV
Sbjct: 241 QKPKKPKHDVVLPVYTFPISSVEPKSYKTTTTMTTSSFRAETWSPNVVPDLRSQPTDINV 300

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BLAST of CsGy5G010540.1 vs. NCBI nr
Match: XP_008460609.1 (PREDICTED: AT-hook motif nuclear-localized protein 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 442.6 bits (1137), Expect = 1.0e-120
Identity = 248/305 (81.31%), Postives = 252/305 (82.62%), Query Frame = 0


Query: 1   MTGGQGDTGNGIEAVAGSNNPRPETAAPPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLN 60
           MTGG+GDTGNGIEAVAGSN                           RGRPRKYGPDGKLN
Sbjct: 8   MTGGKGDTGNGIEAVAGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRPRKYGPDGKLN 67

Query: 61  VAALSPKPISASAPAPAAVIDFSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTP 120
           VAALSPKPISASAPAP AVIDFSAEKRGKVRPASSLTKTKYEVE+LGEWVPCSVGANFTP
Sbjct: 68  VAALSPKPISASAPAPTAVIDFSAEKRGKVRPASSLTKTKYEVESLGEWVPCSVGANFTP 127

Query: 121 HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE------- 180
           HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE       
Sbjct: 128 HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILS 187

Query: 181 --------------SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHE 240
                         SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQ E
Sbjct: 188 LSGSFMPSDSVGTKSRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQTE 247

Query: 241 QKPKKPKHDVVLPVSTFPISSVEPKSYKTTTTMTTSSFRAETWSPNVVPDLRSQPTDINV 285
           QKPKK +HDVVLPVSTFPISSVEPKS+KTTT  TTSSFRAETWSPNVVPDLRSQPTDINV
Sbjct: 248 QKPKKSRHDVVLPVSTFPISSVEPKSFKTTT--TTSSFRAETWSPNVVPDLRSQPTDINV 307

[Close]

BLAST of CsGy5G010540.1 vs. NCBI nr
Match: XP_008460610.1 (PREDICTED: AT-hook motif nuclear-localized protein 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 442.6 bits (1137), Expect = 1.0e-120
Identity = 248/305 (81.31%), Postives = 252/305 (82.62%), Query Frame = 0


Query: 1   MTGGQGDTGNGIEAVAGSNNPRPETAAPPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLN 60
           MTGG+GDTGNGIEAVAGSN                           RGRPRKYGPDGKLN
Sbjct: 1   MTGGKGDTGNGIEAVAGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRPRKYGPDGKLN 60

Query: 61  VAALSPKPISASAPAPAAVIDFSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTP 120
           VAALSPKPISASAPAP AVIDFSAEKRGKVRPASSLTKTKYEVE+LGEWVPCSVGANFTP
Sbjct: 61  VAALSPKPISASAPAPTAVIDFSAEKRGKVRPASSLTKTKYEVESLGEWVPCSVGANFTP 120

Query: 121 HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE------- 180
           HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE       
Sbjct: 121 HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILS 180

Query: 181 --------------SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHE 240
                         SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQ E
Sbjct: 181 LSGSFMPSDSVGTKSRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQTE 240

Query: 241 QKPKKPKHDVVLPVSTFPISSVEPKSYKTTTTMTTSSFRAETWSPNVVPDLRSQPTDINV 285
           QKPKK +HDVVLPVSTFPISSVEPKS+KTTT  TTSSFRAETWSPNVVPDLRSQPTDINV
Sbjct: 241 QKPKKSRHDVVLPVSTFPISSVEPKSFKTTT--TTSSFRAETWSPNVVPDLRSQPTDINV 300

[Close]

BLAST of CsGy5G010540.1 vs. NCBI nr
Match: XP_022965130.1 (AT-hook motif nuclear-localized protein 1-like [Cucurbita maxima])

HSP 1 Score: 426.4 bits (1095), Expect = 7.6e-116
Identity = 236/306 (77.12%), Postives = 250/306 (81.70%), Query Frame = 0


Query: 1   MTGGQGDTGNGIEAVAGSNNPRPETAAPPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLN 60
           M GG+GD GNG  A AGS+ PRPE AAP  E GG   SAA AGKKKRGRPRKYGPDGKLN
Sbjct: 1   MEGGEGDAGNGATAPAGSSPPRPEMAAPAPEDGGLVSSAATAGKKKRGRPRKYGPDGKLN 60

Query: 61  VAALSPKPISASAPAPAAVIDFSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTP 120
           VAALSPKP+SASAPA +AVIDFSAEKRGKVRPASSL+KTKYE ENLGEWVPCSVGANFTP
Sbjct: 61  VAALSPKPLSASAPARSAVIDFSAEKRGKVRPASSLSKTKYETENLGEWVPCSVGANFTP 120

Query: 121 HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE------- 180
           HIITV++GEDVTMKVL+FSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE       
Sbjct: 121 HIITVNTGEDVTMKVLAFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILS 180

Query: 181 --------------SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHE 240
                         SR GGMSVSLASP+GR+VGGGV GLLVAASPVQVVVGSFI GNQHE
Sbjct: 181 LSGSFMPSDNAGTKSRTGGMSVSLASPNGRIVGGGVVGLLVAASPVQVVVGSFIFGNQHE 240

Query: 241 QKPKKPKHDVVLPVSTFPISSVEPKSY--KTTTTMTTSSFRAETWSPNVVPDLRSQPTDI 284
           QK KKPKHDV+LPVS FPISSVEPKSY             RAETW+P +VPDL+SQPTDI
Sbjct: 241 QKAKKPKHDVILPVSVFPISSVEPKSYMXXXXXXXXXXXLRAETWTP-LVPDLKSQPTDI 300

[Close]

BLAST of CsGy5G010540.1 vs. NCBI nr
Match: XP_022923290.1 (AT-hook motif nuclear-localized protein 1-like [Cucurbita moschata])

HSP 1 Score: 379.8 bits (974), Expect = 8.2e-102
Identity = 206/260 (79.23%), Postives = 215/260 (82.69%), Query Frame = 0


Query: 48  GRPRKYGPDGKLNVAALSPKPISASAPAPAAVIDFSAEKRGKVRPASSLTKTKYEVENLG 107
           GRPRKYGPDGKLN AALSPKPIS SAPA +AVIDFSAEKRGKVRPASSL+KTKYE ENLG
Sbjct: 49  GRPRKYGPDGKLNAAALSPKPISTSAPARSAVIDFSAEKRGKVRPASSLSKTKYETENLG 108

Query: 108 EWVPCSVGANFTPHIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSG 167
           EWVPCSVGANFTPHIITV++GEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSG
Sbjct: 109 EWVPCSVGANFTPHIITVNTGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSG 168

Query: 168 GTLTYE---------------------SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQ 227
           GTLTYE                     SR GGMSVSLASPDGR+VGGGV GLLVAASPVQ
Sbjct: 169 GTLTYEGRFEILSLSGSFMPSDNAGTKSRTGGMSVSLASPDGRIVGGGVVGLLVAASPVQ 228

Query: 228 VVVGSFISGNQHEQKPKKPKHDVVLPVSTFPISSVEPKSY--KTTTTMTTSSFRAETWSP 285
           VVVGSFI GNQHEQKPKKPK DV+LPVS FPISSVEPKSY             RAETWSP
Sbjct: 229 VVVGSFIFGNQHEQKPKKPKQDVILPVSVFPISSVEPKSYMXXXXXXXXXXXLRAETWSP 288

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BLAST of CsGy5G010540.1 vs. TAIR10
Match: AT4G12080.1 (AT-hook motif nuclear-localized protein 1)

HSP 1 Score: 286.2 bits (731), Expect = 2.2e-77
Identity = 168/270 (62.22%), Postives = 197/270 (72.96%), Query Frame = 0


Query: 47  RGRPRKYGPDGKLNVAALSPKPISASAPAP-------AAVIDFSA-EKRGKVRPASSLTK 106
           RGRPRKYGPDG   V ALSPKPIS SAPAP       + VIDFSA EKR KV+P +S  +
Sbjct: 92  RGRPRKYGPDG--TVVALSPKPIS-SAPAPSHLPPPSSHVIDFSASEKRSKVKPTNSFNR 151

Query: 107 TKY--EVENLGEWVPCSVGANFTPHIITVSSGEDVTMKVLSFSQQGPRAICILSANGVIS 166
           TKY  +VENLGEW PCSVG NFTPHIITV++GEDVTMK++SFSQQGPR+IC+LSANGVIS
Sbjct: 152 TKYHHQVENLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRSICVLSANGVIS 211

Query: 167 SVTLRQPDSSGGTLTYE---------------------SRIGGMSVSLASPDGRVVGGGV 226
           SVTLRQPDSSGGTLTYE                     SR GGMSVSLASPDGRVVGGG+
Sbjct: 212 SVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGGTRSRTGGMSVSLASPDGRVVGGGL 271

Query: 227 AGLLVAASPVQVVVGSFISGNQH-EQKPKKPKHDVVL--PVSTFPISSVEPKSYKTTTTM 283
           AGLLVAASPVQVVVGSF++G  H +QKPKK KHD +L  P +  PISS     ++T  ++
Sbjct: 272 AGLLVAASPVQVVVGSFLAGTDHQDQKPKKNKHDFMLSSPTAAIPISSA--ADHRTIHSV 331

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BLAST of CsGy5G010540.1 vs. TAIR10
Match: AT4G22770.1 (AT hook motif DNA-binding family protein)

HSP 1 Score: 249.2 bits (635), Expect = 3.0e-66
Identity = 151/268 (56.34%), Postives = 182/268 (67.91%), Query Frame = 0


Query: 44  KKKRGRPRKYGPDGKLNVAALSPKPISASAPAPAAVIDFS--AEKRGKVRPA----SSLT 103
           KK+RGRPRKYG DG      LSP PIS++AP  + VIDFS  +EKRGK++PA    SS  
Sbjct: 72  KKRRGRPRKYGHDGA--AVTLSPNPISSAAPTTSHVIDFSTTSEKRGKMKPATPTPSSFI 131

Query: 104 KTKYEVENLGEWVPCSVGANFTPHIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISS 163
           + KY+VENLGEW P S  ANFTPHIITV++GEDVT +++SFSQQG  AIC+L ANGV+SS
Sbjct: 132 RPKYQVENLGEWSPSSAAANFTPHIITVNAGEDVTKRIISFSQQGSLAICVLCANGVVSS 191

Query: 164 VTLRQPDSSGGTLTYE---------------------SRIGGMSVSLASPDGRVVGGGVA 223
           VTLRQPDSSGGTLTYE                     SR GGMSVSLASPDGRVVGGGVA
Sbjct: 192 VTLRQPDSSGGTLTYEGRFEILSLSGTFMPSDSDGTRSRTGGMSVSLASPDGRVVGGGVA 251

Query: 224 GLLVAASPVQVVVGSFISG-NQHEQKPKKPKHDVVLPVSTFPISSVEPKSYKTTTTMTTS 283
           GLLVAA+P+QVVVG+F+ G NQ EQ PK   H+ +   S    +S     ++T   M TS
Sbjct: 252 GLLVAATPIQVVVGTFLGGTNQQEQTPKPHNHNFM--SSPLMPTSSNVADHRTIRPM-TS 311

[Close]

BLAST of CsGy5G010540.1 vs. TAIR10
Match: AT4G25320.1 (AT hook motif DNA-binding family protein)

HSP 1 Score: 179.9 bits (455), Expect = 2.2e-45
Identity = 116/243 (47.74%), Postives = 147/243 (60.49%), Query Frame = 0


Query: 38  SAAEAGKKKRGRPRKYGPDGKLNVAALSPKPISASAPAPAAVIDFSAEKRGKVRPASS-- 97
           ++AE  KKKRGRPRKY PDG L V  LSP PIS+S P  +   +F   KRG+ R  S+  
Sbjct: 80  TSAEQLKKKRGRPRKYNPDGTL-VVTLSPMPISSSVPLTS---EFPPRKRGRGRGKSNRW 139

Query: 98  --------LTKTKYEVENLGEWVPCSVGANFTPHIITVSSGEDVTMKVLSFSQQGPRAIC 157
                     ++  +    G      VGANFTPH++ V++GEDVTMK+++FSQQG RAIC
Sbjct: 140 LKKSQMFQFDRSPVDTNLAGVGTADFVGANFTPHVLIVNAGEDVTMKIMTFSQQGSRAIC 199

Query: 158 ILSANGVISSVTLRQPDSSGGTLTYE---------------------SRIGGMSVSLASP 217
           ILSANG IS+VTLRQ  +SGGTLTYE                     SR GGMSV LA P
Sbjct: 200 ILSANGPISNVTLRQSMTSGGTLTYEGRFEILSLTGSFMQNDSGGTRSRAGGMSVCLAGP 259

Query: 218 DGRVVGGGVAGLLVAASPVQVVVGSFISGNQHEQ----KPKKPKHDVVLPVSTFPISSVE 246
           DGRV GGG+AGL +AA PVQV+VG+FI+G +  Q    K ++ +        +F IS+ E
Sbjct: 260 DGRVFGGGLAGLFLAAGPVQVMVGTFIAGQEQSQLELAKERRLRFGAQPSSISFNISAEE 318

[Close]

BLAST of CsGy5G010540.1 vs. TAIR10
Match: AT4G00200.1 (AT hook motif DNA-binding family protein)

HSP 1 Score: 168.3 bits (425), Expect = 6.8e-42
Identity = 110/226 (48.67%), Postives = 137/226 (60.62%), Query Frame = 0


Query: 28  PPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLNVAALSPKPISASAPAPAAVIDFSAEK- 87
           PP E   P+   A +GKK+RGRPRKY  +G               AP P++ +    ++ 
Sbjct: 41  PPMEAPMPSSGEA-SGKKRRGRPRKYEANG---------------APLPSSSVPLVKKRV 100

Query: 88  RGKVR--PASSLTKT-----KYEVENLGEWVPCSVGANFTPHIITVSSGEDVTMKVLSFS 147
           RGK+       + KT       E   +           FTPH+ITV++GED+TM+++SFS
Sbjct: 101 RGKLNGFDMKKMHKTIGFHSSGERFGVXXXXXXXXXXXFTPHVITVNTGEDITMRIISFS 160

Query: 148 QQGPRAICILSANGVISSVTLRQPDSSGGTLTYESRI---------------------GG 207
           QQGPRAICILSANGVIS+VTLRQPDS GGTLTYE R                      GG
Sbjct: 161 QQGPRAICILSANGVISNVTLRQPDSCGGTLTYEGRFEILSLSGSFMETENQGSKGRSGG 220

Query: 208 MSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHE-QKPK 224
           MSVSLA PDGRVVGGGVAGLL+AA+P+QVVVGSFI+ +Q + QKP+
Sbjct: 221 MSVSLAGPDGRVVGGGVAGLLIAATPIQVVVGSFITSDQQDHQKPR 250

[Close]

BLAST of CsGy5G010540.1 vs. TAIR10
Match: AT5G62260.1 (AT hook motif DNA-binding family protein)

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-39
Identity = 105/211 (49.76%), Postives = 126/211 (59.72%), Query Frame = 0


Query: 49  RPRKYGPDGKLNV----AALSPKPISASAPAPAAVIDFSAEKRGKV----RPASSLTKT- 108
           RPRKY PDG LN       LSP PIS+S P      D+   KRGK     +P   + K+ 
Sbjct: 81  RPRKYAPDGSLNPRFLRPTLSPTPISSSIPLSG---DYQ-WKRGKAQQQHQPLEFVKKSH 140

Query: 109 KYEVENLGEWVP-----CSVGANFTPHIITVSSGEDVTMKVLSFSQQGPRAICILSANGV 168
           K+E  +     P     C VGANFT H  TV+ GEDVTMKV+ +SQQG RAICILSA G 
Sbjct: 141 KFEYGSPAPTPPLPGLSCYVGANFTTHQFTVNGGEDVTMKVMPYSQQGSRAICILSATGS 200

Query: 169 ISSVTLRQPDSSGGTLTYESRI---------------------GGMSVSLASPDGRVVGG 225
           IS+VTL QP ++GGTLTYE R                      GGMS+SLA P+G + GG
Sbjct: 201 ISNVTLGQPTNAGGTLTYEGRFEILSLSGSFMPTENGGTKGRAGGMSISLAGPNGNIFGG 260

[Close]

BLAST of CsGy5G010540.1 vs. Swiss-Prot
Match: sp|Q8VYJ2|AHL1_ARATH (AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL1 PE=1 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 4.0e-76
Identity = 168/270 (62.22%), Postives = 197/270 (72.96%), Query Frame = 0


Query: 47  RGRPRKYGPDGKLNVAALSPKPISASAPAP-------AAVIDFSA-EKRGKVRPASSLTK 106
           RGRPRKYGPDG   V ALSPKPIS SAPAP       + VIDFSA EKR KV+P +S  +
Sbjct: 92  RGRPRKYGPDG--TVVALSPKPIS-SAPAPSHLPPPSSHVIDFSASEKRSKVKPTNSFNR 151

Query: 107 TKY--EVENLGEWVPCSVGANFTPHIITVSSGEDVTMKVLSFSQQGPRAICILSANGVIS 166
           TKY  +VENLGEW PCSVG NFTPHIITV++GEDVTMK++SFSQQGPR+IC+LSANGVIS
Sbjct: 152 TKYHHQVENLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRSICVLSANGVIS 211

Query: 167 SVTLRQPDSSGGTLTYE---------------------SRIGGMSVSLASPDGRVVGGGV 226
           SVTLRQPDSSGGTLTYE                     SR GGMSVSLASPDGRVVGGG+
Sbjct: 212 SVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGGTRSRTGGMSVSLASPDGRVVGGGL 271

Query: 227 AGLLVAASPVQVVVGSFISGNQH-EQKPKKPKHDVVL--PVSTFPISSVEPKSYKTTTTM 283
           AGLLVAASPVQVVVGSF++G  H +QKPKK KHD +L  P +  PISS     ++T  ++
Sbjct: 272 AGLLVAASPVQVVVGSFLAGTDHQDQKPKKNKHDFMLSSPTAAIPISSA--ADHRTIHSV 331

[Close]

BLAST of CsGy5G010540.1 vs. Swiss-Prot
Match: sp|O49658|AHL2_ARATH (AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL2 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 5.4e-65
Identity = 151/268 (56.34%), Postives = 182/268 (67.91%), Query Frame = 0


Query: 44  KKKRGRPRKYGPDGKLNVAALSPKPISASAPAPAAVIDFS--AEKRGKVRPA----SSLT 103
           KK+RGRPRKYG DG      LSP PIS++AP  + VIDFS  +EKRGK++PA    SS  
Sbjct: 72  KKRRGRPRKYGHDGA--AVTLSPNPISSAAPTTSHVIDFSTTSEKRGKMKPATPTPSSFI 131

Query: 104 KTKYEVENLGEWVPCSVGANFTPHIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISS 163
           + KY+VENLGEW P S  ANFTPHIITV++GEDVT +++SFSQQG  AIC+L ANGV+SS
Sbjct: 132 RPKYQVENLGEWSPSSAAANFTPHIITVNAGEDVTKRIISFSQQGSLAICVLCANGVVSS 191

Query: 164 VTLRQPDSSGGTLTYE---------------------SRIGGMSVSLASPDGRVVGGGVA 223
           VTLRQPDSSGGTLTYE                     SR GGMSVSLASPDGRVVGGGVA
Sbjct: 192 VTLRQPDSSGGTLTYEGRFEILSLSGTFMPSDSDGTRSRTGGMSVSLASPDGRVVGGGVA 251

Query: 224 GLLVAASPVQVVVGSFISG-NQHEQKPKKPKHDVVLPVSTFPISSVEPKSYKTTTTMTTS 283
           GLLVAA+P+QVVVG+F+ G NQ EQ PK   H+ +   S    +S     ++T   M TS
Sbjct: 252 GLLVAATPIQVVVGTFLGGTNQQEQTPKPHNHNFM--SSPLMPTSSNVADHRTIRPM-TS 311

[Close]

BLAST of CsGy5G010540.1 vs. Swiss-Prot
Match: sp|Q9SB31|AHL3_ARATH (AT-hook motif nuclear-localized protein 3 OS=Arabidopsis thaliana OX=3702 GN=AHL3 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 4.0e-44
Identity = 116/243 (47.74%), Postives = 147/243 (60.49%), Query Frame = 0


Query: 38  SAAEAGKKKRGRPRKYGPDGKLNVAALSPKPISASAPAPAAVIDFSAEKRGKVRPASS-- 97
           ++AE  KKKRGRPRKY PDG L V  LSP PIS+S P  +   +F   KRG+ R  S+  
Sbjct: 80  TSAEQLKKKRGRPRKYNPDGTL-VVTLSPMPISSSVPLTS---EFPPRKRGRGRGKSNRW 139

Query: 98  --------LTKTKYEVENLGEWVPCSVGANFTPHIITVSSGEDVTMKVLSFSQQGPRAIC 157
                     ++  +    G      VGANFTPH++ V++GEDVTMK+++FSQQG RAIC
Sbjct: 140 LKKSQMFQFDRSPVDTNLAGVGTADFVGANFTPHVLIVNAGEDVTMKIMTFSQQGSRAIC 199

Query: 158 ILSANGVISSVTLRQPDSSGGTLTYE---------------------SRIGGMSVSLASP 217
           ILSANG IS+VTLRQ  +SGGTLTYE                     SR GGMSV LA P
Sbjct: 200 ILSANGPISNVTLRQSMTSGGTLTYEGRFEILSLTGSFMQNDSGGTRSRAGGMSVCLAGP 259

Query: 218 DGRVVGGGVAGLLVAASPVQVVVGSFISGNQHEQ----KPKKPKHDVVLPVSTFPISSVE 246
           DGRV GGG+AGL +AA PVQV+VG+FI+G +  Q    K ++ +        +F IS+ E
Sbjct: 260 DGRVFGGGLAGLFLAAGPVQVMVGTFIAGQEQSQLELAKERRLRFGAQPSSISFNISAEE 318

[Close]

BLAST of CsGy5G010540.1 vs. Swiss-Prot
Match: sp|Q4V3E0|AHL7_ARATH (AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana OX=3702 GN=AHL7 PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.2e-40
Identity = 110/226 (48.67%), Postives = 137/226 (60.62%), Query Frame = 0


Query: 28  PPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLNVAALSPKPISASAPAPAAVIDFSAEK- 87
           PP E   P+   A +GKK+RGRPRKY  +G               AP P++ +    ++ 
Sbjct: 41  PPMEAPMPSSGEA-SGKKRRGRPRKYEANG---------------APLPSSSVPLVKKRV 100

Query: 88  RGKVR--PASSLTKT-----KYEVENLGEWVPCSVGANFTPHIITVSSGEDVTMKVLSFS 147
           RGK+       + KT       E   +           FTPH+ITV++GED+TM+++SFS
Sbjct: 101 RGKLNGFDMKKMHKTIGFHSSGERFGVXXXXXXXXXXXFTPHVITVNTGEDITMRIISFS 160

Query: 148 QQGPRAICILSANGVISSVTLRQPDSSGGTLTYESRI---------------------GG 207
           QQGPRAICILSANGVIS+VTLRQPDS GGTLTYE R                      GG
Sbjct: 161 QQGPRAICILSANGVISNVTLRQPDSCGGTLTYEGRFEILSLSGSFMETENQGSKGRSGG 220

Query: 208 MSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHE-QKPK 224
           MSVSLA PDGRVVGGGVAGLL+AA+P+QVVVGSFI+ +Q + QKP+
Sbjct: 221 MSVSLAGPDGRVVGGGVAGLLIAATPIQVVVGSFITSDQQDHQKPR 250

[Close]

BLAST of CsGy5G010540.1 vs. Swiss-Prot
Match: sp|Q9LVB0|AHL6_ARATH (AT-hook motif nuclear-localized protein 6 OS=Arabidopsis thaliana OX=3702 GN=AHL6 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.5e-38
Identity = 105/211 (49.76%), Postives = 126/211 (59.72%), Query Frame = 0


Query: 49  RPRKYGPDGKLNV----AALSPKPISASAPAPAAVIDFSAEKRGKV----RPASSLTKT- 108
           RPRKY PDG LN       LSP PIS+S P      D+   KRGK     +P   + K+ 
Sbjct: 81  RPRKYAPDGSLNPRFLRPTLSPTPISSSIPLSG---DYQ-WKRGKAQQQHQPLEFVKKSH 140

Query: 109 KYEVENLGEWVP-----CSVGANFTPHIITVSSGEDVTMKVLSFSQQGPRAICILSANGV 168
           K+E  +     P     C VGANFT H  TV+ GEDVTMKV+ +SQQG RAICILSA G 
Sbjct: 141 KFEYGSPAPTPPLPGLSCYVGANFTTHQFTVNGGEDVTMKVMPYSQQGSRAICILSATGS 200

Query: 169 ISSVTLRQPDSSGGTLTYESRI---------------------GGMSVSLASPDGRVVGG 225
           IS+VTL QP ++GGTLTYE R                      GGMS+SLA P+G + GG
Sbjct: 201 ISNVTLGQPTNAGGTLTYEGRFEILSLSGSFMPTENGGTKGRAGGMSISLAGPNGNIFGG 260

[Close]

BLAST of CsGy5G010540.1 vs. TrEMBL
Match: tr|A0A0A0KL67|A0A0A0KL67_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G010650 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 7.2e-147
Identity = 283/305 (92.79%), Postives = 283/305 (92.79%), Query Frame = 0


Query: 1   MTGGQGDTGNGIEAVAGSNNPRPETAAPPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLN 60
           MTGGQGDTGNGIEAVAGSNNPRPETAAPPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLN
Sbjct: 1   MTGGQGDTGNGIEAVAGSNNPRPETAAPPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLN 60

Query: 61  VAALSPKPISASAPAPAAVIDFSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTP 120
           VAALSPKPISASAPAPAAVIDFSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTP
Sbjct: 61  VAALSPKPISASAPAPAAVIDFSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTP 120

Query: 121 HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE------- 180
           HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE       
Sbjct: 121 HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILS 180

Query: 181 --------------SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHE 240
                         SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHE
Sbjct: 181 LSGSFMPSDSIGTKSRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHE 240

Query: 241 QKPKKPKHDVVLPVSTFPISSVEPKSYKTTTTMTTSSFRAETWSPNVVPDLRSQPTDINV 285
           QKPKKPKHDVVLPV TFPISSVEPKSYKTTTTMTTSSFRAETWSPNVVPDLRSQPTDINV
Sbjct: 241 QKPKKPKHDVVLPVYTFPISSVEPKSYKTTTTMTTSSFRAETWSPNVVPDLRSQPTDINV 300

[Close]

BLAST of CsGy5G010540.1 vs. TrEMBL
Match: tr|A0A1S3CCX9|A0A1S3CCX9_CUCME (AT-hook motif nuclear-localized protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499388 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 6.8e-121
Identity = 248/305 (81.31%), Postives = 252/305 (82.62%), Query Frame = 0


Query: 1   MTGGQGDTGNGIEAVAGSNNPRPETAAPPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLN 60
           MTGG+GDTGNGIEAVAGSN                           RGRPRKYGPDGKLN
Sbjct: 8   MTGGKGDTGNGIEAVAGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRPRKYGPDGKLN 67

Query: 61  VAALSPKPISASAPAPAAVIDFSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTP 120
           VAALSPKPISASAPAP AVIDFSAEKRGKVRPASSLTKTKYEVE+LGEWVPCSVGANFTP
Sbjct: 68  VAALSPKPISASAPAPTAVIDFSAEKRGKVRPASSLTKTKYEVESLGEWVPCSVGANFTP 127

Query: 121 HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE------- 180
           HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE       
Sbjct: 128 HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILS 187

Query: 181 --------------SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHE 240
                         SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQ E
Sbjct: 188 LSGSFMPSDSVGTKSRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQTE 247

Query: 241 QKPKKPKHDVVLPVSTFPISSVEPKSYKTTTTMTTSSFRAETWSPNVVPDLRSQPTDINV 285
           QKPKK +HDVVLPVSTFPISSVEPKS+KTTT  TTSSFRAETWSPNVVPDLRSQPTDINV
Sbjct: 248 QKPKKSRHDVVLPVSTFPISSVEPKSFKTTT--TTSSFRAETWSPNVVPDLRSQPTDINV 307

[Close]

BLAST of CsGy5G010540.1 vs. TrEMBL
Match: tr|A0A1S3CCU9|A0A1S3CCU9_CUCME (AT-hook motif nuclear-localized protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499388 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 6.8e-121
Identity = 248/305 (81.31%), Postives = 252/305 (82.62%), Query Frame = 0


Query: 1   MTGGQGDTGNGIEAVAGSNNPRPETAAPPSEGGGPAGSAAEAGKKKRGRPRKYGPDGKLN 60
           MTGG+GDTGNGIEAVAGSN                           RGRPRKYGPDGKLN
Sbjct: 1   MTGGKGDTGNGIEAVAGSNXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRPRKYGPDGKLN 60

Query: 61  VAALSPKPISASAPAPAAVIDFSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTP 120
           VAALSPKPISASAPAP AVIDFSAEKRGKVRPASSLTKTKYEVE+LGEWVPCSVGANFTP
Sbjct: 61  VAALSPKPISASAPAPTAVIDFSAEKRGKVRPASSLTKTKYEVESLGEWVPCSVGANFTP 120

Query: 121 HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE------- 180
           HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE       
Sbjct: 121 HIITVSSGEDVTMKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILS 180

Query: 181 --------------SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHE 240
                         SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQ E
Sbjct: 181 LSGSFMPSDSVGTKSRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQTE 240

Query: 241 QKPKKPKHDVVLPVSTFPISSVEPKSYKTTTTMTTSSFRAETWSPNVVPDLRSQPTDINV 285
           QKPKK +HDVVLPVSTFPISSVEPKS+KTTT  TTSSFRAETWSPNVVPDLRSQPTDINV
Sbjct: 241 QKPKKSRHDVVLPVSTFPISSVEPKSFKTTT--TTSSFRAETWSPNVVPDLRSQPTDINV 300

[Close]

BLAST of CsGy5G010540.1 vs. TrEMBL
Match: tr|A0A2P5C8M2|A0A2P5C8M2_PARAD (PPC domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_173320 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 4.4e-88
Identity = 192/296 (64.86%), Postives = 223/296 (75.34%), Query Frame = 0


Query: 17  GSNNPRP---ETAAPPSEGG-GPAGSAAEAGKKKRGRPRKYGPDGKLNVAALSPKPISAS 76
           G + P P   + A PP++G    A       KKKRGRPRKYGPDG + + ALSPKPIS+S
Sbjct: 35  GGSTPTPAVAQPAPPPAQGALAMAPPGTMPAKKKRGRPRKYGPDGSVTM-ALSPKPISSS 94

Query: 77  APAPAAVIDFSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTPHIITVSSGEDVT 136
           AP P  +IDFSAEKRGKVRPASS++KTKYE+ENLGEWV CSVGANFTPHIITV++GEDVT
Sbjct: 95  APPP--IIDFSAEKRGKVRPASSVSKTKYELENLGEWVACSVGANFTPHIITVNTGEDVT 154

Query: 137 MKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE------------------- 196
           MK++SFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE                   
Sbjct: 155 MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNETAG 214

Query: 197 --SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHEQKPKKPKHDVV- 256
             SR GGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSF++GNQHEQKPKK KH+ + 
Sbjct: 215 TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPKKQKHEYIS 274

Query: 257 --LPVSTFPISSVEPKSYKTTTTMTTSSFRAETWSPNVVPDLRSQPTDINVSLTSG 285
              P +  PISS +PK+  T    +++SFR + WS ++  D +++ TDINVSL  G
Sbjct: 275 NATPTAAIPISSADPKANFT----SSASFRGDNWS-SLAADSKTKATDINVSLPGG 322

[Close]

BLAST of CsGy5G010540.1 vs. TrEMBL
Match: tr|A0A2P5F519|A0A2P5F519_9ROSA (PPC domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_111650 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.3e-87
Identity = 191/296 (64.53%), Postives = 221/296 (74.66%), Query Frame = 0


Query: 17  GSNNPRPETAAPPSEGGGPAGSAAEAG----KKKRGRPRKYGPDGKLNVAALSPKPISAS 76
           G + P P  A P       A + A  G    KKKRGRPRKYGPDG + + ALSPKPIS+S
Sbjct: 35  GGSTPTPAVAQPAPPLAQGASAMAPPGTMPAKKKRGRPRKYGPDGSVTM-ALSPKPISSS 94

Query: 77  APAPAAVIDFSAEKRGKVRPASSLTKTKYEVENLGEWVPCSVGANFTPHIITVSSGEDVT 136
           AP P  +IDFSAEKRGKVRPASS++KTKYE+ENLGEWV CSVGANFTPHIITV++GEDVT
Sbjct: 95  APPP--IIDFSAEKRGKVRPASSVSKTKYELENLGEWVACSVGANFTPHIITVNTGEDVT 154

Query: 137 MKVLSFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE------------------- 196
           MK++SFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE                   
Sbjct: 155 MKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNETAG 214

Query: 197 --SRIGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHEQKPKKPKHDVV- 256
             SR GGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSF++GNQHEQKPKK KH+ + 
Sbjct: 215 TRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPKKQKHEYIS 274

Query: 257 --LPVSTFPISSVEPKSYKTTTTMTTSSFRAETWSPNVVPDLRSQPTDINVSLTSG 285
              P +  PISS +P++  T    +++SFR + WS ++  D +++ TDINVSL  G
Sbjct: 275 NTTPTAAIPISSADPRANLT----SSASFRGDNWS-SLAADSKTKATDINVSLPGG 322

The following BLAST results are available for this feature:

BLAST of CsGy5G010540.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149134.2	1.1e-146	92.79	PREDICTED: AT-hook motif nuclear-localized protein 1-like [Cucumis sativus] >KGN...	[more]
XP_008460609.1	1.0e-120	81.31	PREDICTED: AT-hook motif nuclear-localized protein 1-like isoform X1 [Cucumis me...	[more]
XP_008460610.1	1.0e-120	81.31	PREDICTED: AT-hook motif nuclear-localized protein 1-like isoform X2 [Cucumis me...	[more]
XP_022965130.1	7.6e-116	77.12	AT-hook motif nuclear-localized protein 1-like [Cucurbita maxima]	[more]
XP_022923290.1	8.2e-102	79.23	AT-hook motif nuclear-localized protein 1-like [Cucurbita moschata]	[more]

BLAST of CsGy5G010540.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G12080.1	2.2e-77	62.22	AT-hook motif nuclear-localized protein 1	[more]
AT4G22770.1	3.0e-66	56.34	AT hook motif DNA-binding family protein	[more]
AT4G25320.1	2.2e-45	47.74	AT hook motif DNA-binding family protein	[more]
AT4G00200.1	6.8e-42	48.67	AT hook motif DNA-binding family protein	[more]
AT5G62260.1	1.4e-39	49.76	AT hook motif DNA-binding family protein	[more]

BLAST of CsGy5G010540.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VYJ2\|AHL1_ARATH	4.0e-76	62.22	AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
sp\|O49658\|AHL2_ARATH	5.4e-65	56.34	AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
sp\|Q9SB31\|AHL3_ARATH	4.0e-44	47.74	AT-hook motif nuclear-localized protein 3 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
sp\|Q4V3E0\|AHL7_ARATH	1.2e-40	48.67	AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
sp\|Q9LVB0\|AHL6_ARATH	2.5e-38	49.76	AT-hook motif nuclear-localized protein 6 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]

BLAST of CsGy5G010540.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KL67\|A0A0A0KL67_CUCSA	7.2e-147	92.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G010650 PE=4 SV=1	[more]
tr\|A0A1S3CCX9\|A0A1S3CCX9_CUCME	6.8e-121	81.31	AT-hook motif nuclear-localized protein 1-like isoform X1 OS=Cucumis melo OX=365...	[more]
tr\|A0A1S3CCU9\|A0A1S3CCU9_CUCME	6.8e-121	81.31	AT-hook motif nuclear-localized protein 1-like isoform X2 OS=Cucumis melo OX=365...	[more]
tr\|A0A2P5C8M2\|A0A2P5C8M2_PARAD	4.4e-88	64.86	PPC domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_173...	[more]
tr\|A0A2P5F519\|A0A2P5F519_9ROSA	1.3e-87	64.53	PPC domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_111650 ...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005175	PPC_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsGy5G010540	CsGy5G010540	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy5G010540.1.five_prime_UTR.2	CsGy5G010540.1.five_prime_UTR.2	five_prime_UTR
CsGy5G010540.1.five_prime_UTR.1	CsGy5G010540.1.five_prime_UTR.1	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy5G010540.1.exon.6	CsGy5G010540.1.exon.6	exon
CsGy5G010540.1.exon.5	CsGy5G010540.1.exon.5	exon
CsGy5G010540.1.exon.4	CsGy5G010540.1.exon.4	exon
CsGy5G010540.1.exon.3	CsGy5G010540.1.exon.3	exon
CsGy5G010540.1.exon.2	CsGy5G010540.1.exon.2	exon
CsGy5G010540.1.exon.1	CsGy5G010540.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy5G010540.1.CDS.5	CsGy5G010540.1.CDS.5	CDS
CsGy5G010540.1.CDS.4	CsGy5G010540.1.CDS.4	CDS
CsGy5G010540.1.CDS.3	CsGy5G010540.1.CDS.3	CDS
CsGy5G010540.1.CDS.2	CsGy5G010540.1.CDS.2	CDS
CsGy5G010540.1.CDS.1	CsGy5G010540.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsGy5G010540.1.three_prime_UTR.1	CsGy5G010540.1.three_prime_UTR.1	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsGy5G010540.1	CsGy5G010540.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	DUF296	coord: 119..212 e-value: 2.9E-20 score: 72.5
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 115..258 score: 18.798
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 119..189 e-value: 6.82884E-13 score: 62.2178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	PANTHER	PTHR31500:SF7	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1-RELATED	coord: 25..175
None	No IPR available	PANTHER	PTHR31500:SF7	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1-RELATED	coord: 174..282
None	No IPR available	PANTHER	PTHR31500	FAMILY NOT NAMED	coord: 25..175 coord: 174..282
None	No IPR available	SUPERFAMILY	SSF117856	AF0104/ALDC/Ptd012-like	coord: 117..218