CsGy5G004090 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G004090
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	L-lactate dehydrogenase
Location	Chr5 : 2742048 .. 2744859 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATAAAACTTATATTGAGGATATCAACTTTGTATTACACCAATCCATCAAATCCATGCAAAAAAATGAAGAAAAATTTTCTTCTTCTTCATCCTTTCCAACGCGTTCCCCTTACAAAATCCGCCAAGTTATCTGCAACAAAAAATTCCACCGCCGATCACAATCTCCAAAACCCTTTTTTGCAATGCAGAAAAGTCCCTCAACCTCTTCCTTAGGTCCCGGCGGCCTCGACCTTTCTCAAGCCTTCTTCAAACCAATCCGCGACGCCTCTCCTCTATCCACCTCAAATTGCAACACCAAAATCTCTGTCATCGGCACTGGAAACGTCGGTATGGCCATCGCTCAAACCATCCTCACTCAAGATCTGGTCGATGAACTCGTCCTCGTCGACGCCAAGCCCGACAAACTCCGTGGCGAAATGCTAGATCTCCAACACGCTGCTGCTTTTCTCCCTCGTACAAAAATCAGCGCCTCCACTGATTACTCCATTACTGCTAGATCTGATCTGTGTATTGTTACTGCTGGTGCTCGGCAGATCGCCGGTGAATCTAGGTTGAACCTATTGCAGAGGAATGTTACTCTGTTTCAGAAGATCGTTCCGCTGTTGGTTCAGTTCTCTCCTGAGACGATTCTTTTGATTGTTTCGAATCCGGTGGATGTTTTGACTTATGTTGCTTGGAAACTCTCTGGTTTTTCGTCGAATCGTGTGATTGGATCGGGAACGAATCTGGATTCATCTAGGTTTCGGTTTCTTATTGCGGATCATCTCGACGTTAACGCTCAGGATGTTCAGGTCCGTTTTCCGATTGATCATTGTTTTTTTGGTTAATTTGGCGTTCTTTTGCTGAAGAAAGTTCCCTTTCGTTTGAATTGTTTTTGGTTGATTGGAACCAAATGAGTTGATCATTTTTTTGGGAAAAAGTAAACCAAATGAACCACAAAATTTCATATTTGTAAATATTTCGAGTGATTTGTAATTTATCATTTCCCACAAACAAGTTATTAGACTTTTTTTGTAAGTTCATAAATCAAGTTTAAATAGACATTCATATAAATCAAATTACGTGTACGAGTAATTTATATTTGAACTCAAAAACTTAACTATCATTTATAAATTTGGACATCTTACTTATATTATGTTTATAATTAAAACCCTAATAAATATGAGAGCTTTTTGGTCTGATGATCGGTTATCGAATTGGAGTGATAATGGATAACAATTTATACCAACGTTTTAAAAATTACAAATATAGCAAATTCTAGATGATAGACTCTTATGGTTTATTATTGCATGTAAATATTGATCTATTATTGATAAAATCTAACCTATTTTGTTGTATTTGCATTTTTTTATAAAAATATTACTATATACACTATTATTTTAAATATAATTAGGATATTTACAATTGTTTGGCCCGCAACCACAAACATGTGAAGTTGGGATAGGGATTTGAAAAAAGTATTAGAGATTATAGTGGACTTGTCTACCGCAAGGCAATGTTGAATGGGAAAAAGTTTTAAAAAATGATGTCACATTGGGTTATGACTTCTCTACCACGAGGCACCACTCGATTTGGAAGTTCATCCCTATCCACGATGTCATTTAGAAGGCTAAAAATACATTATGACATAAACATAAGGTTAGATTTCATACAATTGTGGGATGTAGGTAAAAAAAAAAAAACATAAAAACGCTTAAAAATAATTCTTTTAATTTTTGTTAGAAAGAGCTAAATGCTAACTTTTAAAATTATAAATTAGAAATGTAATTATTATTTTTAAGGTAAAGTTAGAAAAGAAAATAATAAAAACCAAAACAATATTTTGAAAATTTAGTTACCAAAGTGAAAAAATAAATTCAAAGCTCACCCAATTAGAATTCAGACCATCGTTTAGGTATCAAACCATAGATGAATACCTAGAAATTAAACTAGCATTGATATTTGGATCATGAAGCTAAAAAAGAGTGGATTATATATATGTATGTTTTTGAAGGCATTCATAGTTGGAGAGCATGGCGACAGCTCGGTGGCACTATGGTCGAGCATAAGTGTGGGTGGGGTGCCGATCCTAAGCTTTCTAAAGAATCAACAAATCGCCTACGAGAAAGAAACATTAGAGAAAATTCACAAAGAGGTCATAGGTGGGGCTTACGAAGTCATAAACCTTAAGGGCTACACATCATGGGCGATCGGGTACTCTGTCGCAAGTTTAGCTCGGTCGATCCTTCGAGACCAAAGGAGGATCCATCCTGTCTCTGTTATTGCAAAAGGGTTTTACGGTATCGAGGGTGGTGACTTGTTCCTTAGCCTGCCTGCACAACTTGGGAGGGGTGGAGTATTGGGGATCACCAATGTGCATCTAACAACAGAGGAGTCGAAACGGTTGAGGGACTCCGCGAACACCATCTTGCATGTGCAAGCTGAACTGGGGATCTGAAAATTTCATTACATTTTCTATCCTATGGATGTATTGATGTGTTGTTGTGGTGATGTTTGTGTTTGTTCTAAGGTTGGTTGTACAGGAAAGAGCAAACTATGGGGTGAGATTGATAATGTTTTTCTTTTTTATTACCCCTTTAGAATTTTACACTTAATTACATATGATAAATGTATTAACTATGATAATACAAGGAATGATATCATGATCATGCTGGATTAAGATGCTACATTGATGAACAAATCTCCCTAAACTCACAAATTTTAATGAAAATATATAATTTCTATGTCATTTTCTTTATAATTTTTGTGTGTAATATATATCATATTAAAAACAAATTTTGAAATGGAAGTCTATTATTATAGGCTAAA

mRNA sequence

ATGTATAAAACTTATATTGAGGATATCAACTTTGTATTACACCAATCCATCAAATCCATGCAAAAAAATGAAGAAAAATTTTCTTCTTCTTCATCCTTTCCAACGCGTTCCCCTTACAAAATCCGCCAAGTTATCTGCAACAAAAAATTCCACCGCCGATCACAATCTCCAAAACCCTTTTTTGCAATGCAGAAAAGTCCCTCAACCTCTTCCTTAGGTCCCGGCGGCCTCGACCTTTCTCAAGCCTTCTTCAAACCAATCCGCGACGCCTCTCCTCTATCCACCTCAAATTGCAACACCAAAATCTCTGTCATCGGCACTGGAAACGTCGGTATGGCCATCGCTCAAACCATCCTCACTCAAGATCTGGTCGATGAACTCGTCCTCGTCGACGCCAAGCCCGACAAACTCCGTGGCGAAATGCTAGATCTCCAACACGCTGCTGCTTTTCTCCCTCGTACAAAAATCAGCGCCTCCACTGATTACTCCATTACTGCTAGATCTGATCTGTGTATTGTTACTGCTGGTGCTCGGCAGATCGCCGGTGAATCTAGGTTGAACCTATTGCAGAGGAATGTTACTCTGTTTCAGAAGATCGTTCCGCTGTTGGTTCAGTTCTCTCCTGAGACGATTCTTTTGATTGTTTCGAATCCGGTGGATGTTTTGACTTATGTTGCTTGGAAACTCTCTGGTTTTTCGTCGAATCGTGTGATTGGATCGGGAACGAATCTGGATTCATCTAGGTTTCGGTTTCTTATTGCGGATCATCTCGACGTTAACGCTCAGGATGTTCAGGCATTCATAGTTGGAGAGCATGGCGACAGCTCGGTGGCACTATGGTCGAGCATAAGTGTGGGTGGGGTGCCGATCCTAAGCTTTCTAAAGAATCAACAAATCGCCTACGAGAAAGAAACATTAGAGAAAATTCACAAAGAGGTCATAGGTGGGGCTTACGAAGTCATAAACCTTAAGGGCTACACATCATGGGCGATCGGGTACTCTGTCGCAAGTTTAGCTCGGTCGATCCTTCGAGACCAAAGGAGGATCCATCCTGTCTCTGTTATTGCAAAAGGGTTTTACGGTATCGAGGGTGGTGACTTGTTCCTTAGCCTGCCTGCACAACTTGGGAGGGGTGGAGTATTGGGGATCACCAATGTGCATCTAACAACAGAGGAGTCGAAACGGTTGAGGGACTCCGCGAACACCATCTTGCATGTGCAAGCTGAACTGGGGATCTGAAAATTTCATTACATTTTCTATCCTATGGATGTATTGATGTGTTGTTGTGGTGATGTTTGTGTTTGTTCTAAGGTTGGTTGTACAGGAAAGAGCAAACTATGGGGTGAGATTGATAATGTTTTTCTTTTTTATTACCCCTTTAGAATTTTACACTTAATTACATATGATAAATGTATTAACTATGATAATACAAGGAATGATATCATGATCATGCTGGATTAAGATGCTACATTGATGAACAAATCTCCCTAAACTCACAAATTTTAATGAAAATATATAATTTCTATGTCATTTTCTTTATAATTTTTGTGTGTAATATATATCATATTAAAAACAAATTTTGAAATGGAAGTCTATTATTATAGGCTAAA

Coding sequence (CDS)

ATGTATAAAACTTATATTGAGGATATCAACTTTGTATTACACCAATCCATCAAATCCATGCAAAAAAATGAAGAAAAATTTTCTTCTTCTTCATCCTTTCCAACGCGTTCCCCTTACAAAATCCGCCAAGTTATCTGCAACAAAAAATTCCACCGCCGATCACAATCTCCAAAACCCTTTTTTGCAATGCAGAAAAGTCCCTCAACCTCTTCCTTAGGTCCCGGCGGCCTCGACCTTTCTCAAGCCTTCTTCAAACCAATCCGCGACGCCTCTCCTCTATCCACCTCAAATTGCAACACCAAAATCTCTGTCATCGGCACTGGAAACGTCGGTATGGCCATCGCTCAAACCATCCTCACTCAAGATCTGGTCGATGAACTCGTCCTCGTCGACGCCAAGCCCGACAAACTCCGTGGCGAAATGCTAGATCTCCAACACGCTGCTGCTTTTCTCCCTCGTACAAAAATCAGCGCCTCCACTGATTACTCCATTACTGCTAGATCTGATCTGTGTATTGTTACTGCTGGTGCTCGGCAGATCGCCGGTGAATCTAGGTTGAACCTATTGCAGAGGAATGTTACTCTGTTTCAGAAGATCGTTCCGCTGTTGGTTCAGTTCTCTCCTGAGACGATTCTTTTGATTGTTTCGAATCCGGTGGATGTTTTGACTTATGTTGCTTGGAAACTCTCTGGTTTTTCGTCGAATCGTGTGATTGGATCGGGAACGAATCTGGATTCATCTAGGTTTCGGTTTCTTATTGCGGATCATCTCGACGTTAACGCTCAGGATGTTCAGGCATTCATAGTTGGAGAGCATGGCGACAGCTCGGTGGCACTATGGTCGAGCATAAGTGTGGGTGGGGTGCCGATCCTAAGCTTTCTAAAGAATCAACAAATCGCCTACGAGAAAGAAACATTAGAGAAAATTCACAAAGAGGTCATAGGTGGGGCTTACGAAGTCATAAACCTTAAGGGCTACACATCATGGGCGATCGGGTACTCTGTCGCAAGTTTAGCTCGGTCGATCCTTCGAGACCAAAGGAGGATCCATCCTGTCTCTGTTATTGCAAAAGGGTTTTACGGTATCGAGGGTGGTGACTTGTTCCTTAGCCTGCCTGCACAACTTGGGAGGGGTGGAGTATTGGGGATCACCAATGTGCATCTAACAACAGAGGAGTCGAAACGGTTGAGGGACTCCGCGAACACCATCTTGCATGTGCAAGCTGAACTGGGGATCTGA

Protein sequence

MYKTYIEDINFVLHQSIKSMQKNEEKFSSSSSFPTRSPYKIRQVICNKKFHRRSQSPKPFFAMQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILTQDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAGESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFYGIEGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI

Homology

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BLAST of CsGy5G004090 vs. NCBI nr
Match: XP_011654796.1 (PREDICTED: L-lactate dehydrogenase B-like [Cucumis sativus] >KGN50243.1 hypothetical protein Csa_5G161920 [Cucumis sativus])

HSP 1 Score: 794.3 bits (2050), Expect = 2.0e-226
Identity = 411/412 (99.76%), Postives = 411/412 (99.76%), Query Frame = 0


Query: 1   MYKTYIEDINFVLHQSIKSMQKNEEKFSSSSSFPTRSPYKIRQVICNKKFHRRSQSPKPF 60
           MYKTYIEDINFVLHQSIKSMQKNEEKFSSSSSFPTRSPYKIRQVICNKKFHRRSQSPKPF
Sbjct: 1   MYKTYIEDINFVLHQSIKSMQKNEEKFSSSSSFPTRSPYKIRQVICNKKFHRRSQSPKPF 60

Query: 61  FAMQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILT 120
           FAMQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILT
Sbjct: 61  FAMQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILT 120

Query: 121 QDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQI 180
           QDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQI
Sbjct: 121 QDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQI 180

Query: 181 AGESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGS 240
           AGESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGS
Sbjct: 181 AGESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGS 240

Query: 241 GTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIA 300
           GTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQI 
Sbjct: 241 GTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIG 300

Query: 301 YEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFY 360
           YEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFY
Sbjct: 301 YEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFY 360

Query: 361 GIEGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 413
           GIEGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI
Sbjct: 361 GIEGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 412

[Close]

BLAST of CsGy5G004090 vs. NCBI nr
Match: XP_008437100.2 (PREDICTED: L-lactate dehydrogenase A [Cucumis melo])

HSP 1 Score: 642.1 bits (1655), Expect = 1.3e-180
Identity = 335/350 (95.71%), Postives = 339/350 (96.86%), Query Frame = 0


Query: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILTQD 122
           MQKSPSTSSLGPGGLDLSQAFFKPIRDASP STSN NTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSTSSLGPGGLDLSQAFFKPIRDASPPSTSNRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 123 LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAG 182
           LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS TA S+LCIVTAGARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSTTAGSNLCIVTAGARQIAG 120

Query: 183 ESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGT 242
           ESRLNLLQRNV LFQKIVP LVQFSPETILLIVSNPVDVLTYVAWKLSGF SNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 243 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 302
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240

Query: 303 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFYGI 362
           KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSV+AKGFYGI
Sbjct: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300

Query: 363 EGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 413
           +GGDLFLSLPAQLGRGGVLGITNVHLT EESKRLRDSANTIL VQ ELGI
Sbjct: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 350

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BLAST of CsGy5G004090 vs. NCBI nr
Match: XP_004151663.2 (PREDICTED: LOW QUALITY PROTEIN: L-lactate dehydrogenase A-like [Cucumis sativus])

HSP 1 Score: 631.3 bits (1627), Expect = 2.3e-177
Identity = 329/350 (94.00%), Postives = 335/350 (95.71%), Query Frame = 0


Query: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILTQD 122
           MQKS S SSLGPGGLDLSQAFFKPIRDASP ST+N NTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSSSISSLGPGGLDLSQAFFKPIRDASPPSTANRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 123 LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAG 182
           LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITA SDLCIVT GARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTGGARQIAG 120

Query: 183 ESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGT 242
           ESRLNLLQRNV LFQKIVP LVQFSPETILLIVSNPVDVLTY+AWKLSGF SNRVI SGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYIAWKLSGFPSNRVIXSGT 180

Query: 243 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 302
           NL+SSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGGVPILSFLKNQQI YE
Sbjct: 181 NLNSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIGYE 240

Query: 303 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFYGI 362
           KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSV+AKGFYGI
Sbjct: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300

Query: 363 EGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 413
           +GGDLFLSLPAQLGRGGVLGITNVHLT EESKRLRDSANTIL VQ ELGI
Sbjct: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 350

[Close]

BLAST of CsGy5G004090 vs. NCBI nr
Match: XP_022958393.1 (L-lactate dehydrogenase A-like [Cucurbita moschata])

HSP 1 Score: 620.2 bits (1598), Expect = 5.2e-174
Identity = 321/350 (91.71%), Postives = 334/350 (95.43%), Query Frame = 0


Query: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILTQD 122
           MQKSPS S+LGPGGLDLSQAFFKPI DASP STS  NTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASALGPGGLDLSQAFFKPIPDASPPSTSKGNTKISVIGAGNVGMAIAQTILTQD 60

Query: 123 LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAG 182
           L DELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITA SDLCIVT GARQIAG
Sbjct: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITAGSDLCIVTVGARQIAG 120

Query: 183 ESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGT 242
           ESRLNLLQRNV LFQKIVP LVQ+SP+TILLIVSNPVDVLTYVAWKLSGF SNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQYSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 243 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 302
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGGVPILSFLK+QQIAYE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKSQQIAYE 240

Query: 303 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFYGI 362
           KETLE IHKEVIGGAYEVI LKGYTSWAIGYSVASLARS+LRDQ+RIHPVSV+AKGFYGI
Sbjct: 241 KETLENIHKEVIGGAYEVIRLKGYTSWAIGYSVASLARSLLRDQQRIHPVSVLAKGFYGI 300

Query: 363 EGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 413
           +GGDLFLSLPA+LGRGGVLGITNVHLTTEE +RL+DSANTIL VQ+ELGI
Sbjct: 301 DGGDLFLSLPARLGRGGVLGITNVHLTTEEMRRLQDSANTILQVQSELGI 350

[Close]

BLAST of CsGy5G004090 vs. NCBI nr
Match: XP_023534013.1 (L-lactate dehydrogenase A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 620.2 bits (1598), Expect = 5.2e-174
Identity = 320/350 (91.43%), Postives = 335/350 (95.71%), Query Frame = 0


Query: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILTQD 122
           MQKSPS S+LGPGGLDLSQAFFKPI DASP STS  NTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASALGPGGLDLSQAFFKPIPDASPPSTSKGNTKISVIGAGNVGMAIAQTILTQD 60

Query: 123 LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAG 182
           L DELVLVDAKPDKLRGEMLDLQHAAAFLPRTKI+ASTDYSITA SDLCIVTAGARQIAG
Sbjct: 61  LADELVLVDAKPDKLRGEMLDLQHAAAFLPRTKINASTDYSITAGSDLCIVTAGARQIAG 120

Query: 183 ESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGT 242
           ESRLNLLQRNV LFQKIVP LVQ+SP+TILL+VSNPVDVLTYVAWKLSGF SNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQYSPDTILLVVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 243 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 302
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGGVPILSFLK+QQIAYE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKSQQIAYE 240

Query: 303 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFYGI 362
           KETLE IHKEVIGGAYEVI LKGYTSWAIGYSVASLARS+LRDQ+RIHPVSV+AKGFYGI
Sbjct: 241 KETLENIHKEVIGGAYEVIRLKGYTSWAIGYSVASLARSLLRDQQRIHPVSVLAKGFYGI 300

Query: 363 EGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 413
           +GGDLFLSLPA+LGRGGVLGITNVHLTTEE +RL+DSANTIL VQ+ELGI
Sbjct: 301 DGGDLFLSLPARLGRGGVLGITNVHLTTEEMRRLQDSANTILQVQSELGI 350

[Close]

BLAST of CsGy5G004090 vs. TAIR10
Match: AT4G17260.1 (Lactate/malate dehydrogenase family protein)

HSP 1 Score: 537.3 bits (1383), Expect = 8.0e-153
Identity = 269/353 (76.20%), Postives = 312/353 (88.39%), Query Frame = 0


Query: 63  MQKSPSTSS---LGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTIL 122
           M+K+ STSS   LGP GLDL+ AFFKPI ++ P   SN  TK+SV+G GNVGMAIAQTIL
Sbjct: 1   MEKNASTSSLKDLGPSGLDLTSAFFKPIHNSDPSLPSNRRTKVSVVGVGNVGMAIAQTIL 60

Query: 123 TQDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQ 182
           TQDL DE+ LVDAKPDKLRGEMLDLQHAAAFLPRTKI+AS DY +TA SDLCIVTAGARQ
Sbjct: 61  TQDLADEIALVDAKPDKLRGEMLDLQHAAAFLPRTKITASVDYEVTAGSDLCIVTAGARQ 120

Query: 183 IAGESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIG 242
             GESRLNLLQRNV LF+ I+P L + SP++IL+IVSNPVDVLTYVAWKLSGF  NRV+G
Sbjct: 121 NPGESRLNLLQRNVALFRHIIPPLAKASPDSILIIVSNPVDVLTYVAWKLSGFPVNRVLG 180

Query: 243 SGTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQI 302
           SGTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGG+P+LSFL+  QI
Sbjct: 181 SGTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGIPVLSFLEKNQI 240

Query: 303 AYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGF 362
           AYEK+TLE IH+ V+G AYEVI LKGYTSWAIGYSVA+LAR+ILRDQR+IHPV+V+A+GF
Sbjct: 241 AYEKQTLEDIHQAVVGSAYEVIGLKGYTSWAIGYSVANLARTILRDQRKIHPVTVLARGF 300

Query: 363 YGIEGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 413
           YG++GGD+FLSLPA LGR GV+ +TNVH+T EE+++L+ SA TIL +Q++LG+
Sbjct: 301 YGVDGGDVFLSLPALLGRNGVVAVTNVHMTDEEAEKLQKSAKTILEMQSQLGL 353

[Close]

BLAST of CsGy5G004090 vs. Swiss-Prot
Match: sp|P22988|LDHA_HORVU (L-lactate dehydrogenase A OS=Hordeum vulgare OX=4513 PE=1 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 2.8e-123
Identity = 231/348 (66.38%), Postives = 279/348 (80.17%), Query Frame = 0


Query: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCN------TKISVIGTGNVGMAIAQ 122
           M K+ S S LG      S  FF+P+ D  P + ++        TKISVIG GNVGMAIAQ
Sbjct: 1   MHKASSLSELGFDAGGASSGFFRPVADGCPATPTSSAVPHRRLTKISVIGAGNVGMAIAQ 60

Query: 123 TILTQDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAG 182
           TILTQ+L DE+ LVDA PDKLRGE LDLQHAAAFLPR +IS  TD ++T  SDL IVTAG
Sbjct: 61  TILTQNLADEIALVDALPDKLRGEALDLQHAAAFLPRVRIS-GTDAAVTKNSDLVIVTAG 120

Query: 183 ARQIAGESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNR 242
           ARQI GE+RLNLLQRNV L++KIVP + + SP+ +LL+VSNPVDVLTYVAWKLSGF ++R
Sbjct: 121 ARQIPGETRLNLLQRNVALYRKIVPPVAEHSPDALLLVVSNPVDVLTYVAWKLSGFPASR 180

Query: 243 VIGSGTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKN 302
           VIGSGTNLDSSRFRFLIA+HLDVNAQDVQA++VGEHGDSSVA+WSSISVGG+P    L++
Sbjct: 181 VIGSGTNLDSSRFRFLIAEHLDVNAQDVQAYMVGEHGDSSVAIWSSISVGGMPAFKSLRD 240

Query: 303 QQIAYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIA 362
              ++++  LE I + V+GGAYEVI LKGYTSWAIGYSVASLA S+LRDQRR+HPVSV+A
Sbjct: 241 SHRSFDEAALEGIRRAVVGGAYEVIGLKGYTSWAIGYSVASLAASLLRDQRRVHPVSVLA 300

Query: 363 KGFYGI-EGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTI 404
            GF+GI +G ++FLSLPA+LGRGG+LG+  + LT  E+ +LR SA T+
Sbjct: 301 SGFHGISDGHEVFLSLPARLGRGGILGVAEMDLTEAEAAQLRRSAKTL 347

[Close]

BLAST of CsGy5G004090 vs. Swiss-Prot
Match: sp|P22989|LDHB_HORVU (L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare OX=4513 PE=1 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 1.4e-122
Identity = 222/333 (66.67%), Postives = 275/333 (82.58%), Query Frame = 0


Query: 78  DLSQAFFKPIRDASPLSTSNCN------TKISVIGTGNVGMAIAQTILTQDLVDELVLVD 137
           D S  FF+ + D  P++ ++C+      TK+SVIG GNVGMAIAQTILTQ+L DE+ LVD
Sbjct: 3   DASSGFFRAVADGCPITHTSCSAPHRRLTKVSVIGAGNVGMAIAQTILTQNLADEIALVD 62

Query: 138 AKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAGESRLNLLQR 197
           A PDKLRGE LDLQHAAAFLPR +I + TD ++T  SDL +VTAGARQI GE+RLNLLQR
Sbjct: 63  ALPDKLRGEALDLQHAAAFLPRVRIVSGTDAAVTKNSDLIVVTAGARQIPGETRLNLLQR 122

Query: 198 NVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGTNLDSSRFRF 257
           NV L++KIVP + + SP+ +LL+VSNPVDVLTYVAWKLSGF ++RVIGSGTNLDSSRFRF
Sbjct: 123 NVALYRKIVPPVAEHSPDALLLVVSNPVDVLTYVAWKLSGFPASRVIGSGTNLDSSRFRF 182

Query: 258 LIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYEKETLEKIHK 317
           L+A+HLDV+AQDVQA++VGEHGDSSVA+WSSISVGG+P L  L++   ++++  LE I +
Sbjct: 183 LVAEHLDVSAQDVQAYMVGEHGDSSVAIWSSISVGGMPALKSLRDSHRSFDEAALEGIRR 242

Query: 318 EVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFYGI-EGGDLFLS 377
            V+GGAYEVI LKGYTSWAIGYSVASLA S+LRDQRR+HPVSV+A GF+GI +G ++FLS
Sbjct: 243 AVVGGAYEVIGLKGYTSWAIGYSVASLATSLLRDQRRVHPVSVLAAGFHGISDGHEVFLS 302

Query: 378 LPAQLGRGGVLGITNVHLTTEESKRLRDSANTI 404
           LPA+LGR GVLG+  + LT  E+ +LR SA T+
Sbjct: 303 LPARLGRAGVLGVAEMDLTEAEAAQLRRSAKTL 335

[Close]

BLAST of CsGy5G004090 vs. Swiss-Prot
Match: sp|P29038|LDH_MAIZE (L-lactate dehydrogenase OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 7.5e-116
Identity = 223/345 (64.64%), Postives = 265/345 (76.81%), Query Frame = 0


Query: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCN----TKISVIGTGNVGMAIAQTI 122
           M+K+ S S LG    D S  FF+P+   S   TS  +    TK+SVIG GNVGMAIAQTI
Sbjct: 1   MKKATSLSELGFDAGDASSGFFRPVSGDSSTPTSQHHRRRLTKVSVIGAGNVGMAIAQTI 60

Query: 123 LTQDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGAR 182
           LT+DL DE+ LVDA PDKLRGEMLDLQHAAAFLPRT++ + TD S+T  SDL IVTAGAR
Sbjct: 61  LTRDLADEIALVDAVPDKLRGEMLDLQHAAAFLPRTRLVSGTDMSVTRGSDLVIVTAGAR 120

Query: 183 QIAGESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVI 242
           QI GE+RL+LLQRNV LF+KIVP L + S + +LL+VSNPVDVLTYVAWKLSGF ++RVI
Sbjct: 121 QIQGETRLDLLQRNVALFRKIVPPLAEQSHDALLLVVSNPVDVLTYVAWKLSGFPASRVI 180

Query: 243 GSGTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQ 302
           GSGTNLDSSRFRFL+A+HLDVNAQDVQA++VGEHGDSSVA+WSS+SV G+P+L  L+   
Sbjct: 181 GSGTNLDSSRFRFLLAEHLDVNAQDVQAYMVGEHGDSSVAVWSSVSVAGMPVLKSLQESH 240

Query: 303 IAYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKG 362
             +++E LE I + V+  AYEVI+LKGYTSWAIGYSVASLA S+LRDQRRIHPVSV+A+G
Sbjct: 241 RCFDEEALEGIRRAVVDSAYEVISLKGYTSWAIGYSVASLAASLLRDQRRIHPVSVLARG 300

Query: 363 FYGIEGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTI 404
           F+GI  G    S               + LT EE+KRLR SA TI
Sbjct: 301 FHGIPDGTTSSSACPPRRXXXXXXRREMELTEEEAKRLRRSAKTI 345

[Close]

BLAST of CsGy5G004090 vs. Swiss-Prot
Match: sp|P06151|LDHA_MOUSE (L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3)

HSP 1 Score: 340.9 bits (873), Expect = 2.0e-92
Identity = 174/310 (56.13%), Postives = 226/310 (72.90%), Query Frame = 0


Query: 101 KISVIGTGNVGMAIAQTILTQDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISAST 160
           KI+V+G G VGMA A +IL +DL DEL LVD   DKL+GEM+DLQH + FL   KI +S 
Sbjct: 22  KITVVGVGAVGMACAISILMKDLADELALVDVMEDKLKGEMMDLQHGSLFLKTPKIVSSK 81

Query: 161 DYSITARSDLCIVTAGARQIAGESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVD 220
           DY +TA S L I+TAGARQ  GESRLNL+QRNV +F+ I+P +V++SP   LLIVSNPVD
Sbjct: 82  DYCVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPHCKLLIVSNPVD 141

Query: 221 VLTYVAWKLSGFSSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALW 280
           +LTYVAWK+SGF  NRVIGSG NLDS+RFR+L+ + L V+A     +++GEHGDSSV +W
Sbjct: 142 ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHALSCHGWVLGEHGDSSVPVW 201

Query: 281 SSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLAR 340
           S ++V GV + S         +KE  +++HK+V+  AYEVI LKGYTSWAIG SVA LA 
Sbjct: 202 SGVNVAGVSLKSLNPELGTDADKEQWKEVHKQVVDSAYEVIKLKGYTSWAIGLSVADLAE 261

Query: 341 SILRDQRRIHPVSVIAKGFYGIEGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSA 400
           SI+++ RR+HP+S + KG YGI   D+FLS+P  LG+ G+  +  V LT EE  RL+ SA
Sbjct: 262 SIMKNLRRVHPISTMIKGLYGI-NEDVFLSVPCILGQNGISDVVKVTLTPEEEARLKKSA 321

Query: 401 NTILHVQAEL 411
           +T+  +Q EL
Sbjct: 322 DTLWGIQKEL 330

[Close]

BLAST of CsGy5G004090 vs. Swiss-Prot
Match: sp|Q9XT87|LDHA_MONDO (L-lactate dehydrogenase A chain OS=Monodelphis domestica OX=13616 GN=LDHA PE=2 SV=3)

HSP 1 Score: 339.7 bits (870), Expect = 4.4e-92
Identity = 172/312 (55.13%), Postives = 227/312 (72.76%), Query Frame = 0


Query: 99  NTKISVIGTGNVGMAIAQTILTQDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISA 158
           + KI+V+G G VGMA A +IL +DL DEL LVD   DKL+GEM+DLQH + FL   KI +
Sbjct: 20  HNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVS 79

Query: 159 STDYSITARSDLCIVTAGARQIAGESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNP 218
           S DY++TA S L ++TAGARQ  GESRLNL+QRNV +F+ I+P +V++SP   LL+VSNP
Sbjct: 80  SKDYAVTANSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLLVVSNP 139

Query: 219 VDVLTYVAWKLSGFSSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVA 278
           VD+LTYVAWKLSGF  NRVIGSG NLDS+RFR+L+ + L +++     +I+GEHGDSSV 
Sbjct: 140 VDILTYVAWKLSGFPKNRVIGSGCNLDSARFRYLMGEKLGIHSSSCHGWILGEHGDSSVP 199

Query: 279 LWSSISVGGVPILSFLKNQQIAYEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASL 338
           +WS ++V GV + S         + E  + +HK+V+  AYEVI LKGYTSWAIG SVA L
Sbjct: 200 VWSGVNVAGVSLKSLHPALGTDSDSEQWKDVHKQVVESAYEVIKLKGYTSWAIGLSVADL 259

Query: 339 ARSILRDQRRIHPVSVIAKGFYGIEGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRD 398
           A SI+++ RR+HP+S + KG YGI   D+FLS+P  LG+ G+  +  V LTTEE  RL+ 
Sbjct: 260 AESIMKNLRRVHPISTMIKGLYGI-NEDVFLSVPCILGQNGISDVVKVTLTTEEESRLKQ 319

Query: 399 SANTILHVQAEL 411
           SA+T+  +Q EL
Sbjct: 320 SADTLWGIQKEL 330

[Close]

BLAST of CsGy5G004090 vs. TrEMBL
Match: tr|A0A0A0KKU9|A0A0A0KKU9_CUCSA (L-lactate dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_5G161920 PE=3 SV=1)

HSP 1 Score: 794.3 bits (2050), Expect = 1.3e-226
Identity = 411/412 (99.76%), Postives = 411/412 (99.76%), Query Frame = 0


Query: 1   MYKTYIEDINFVLHQSIKSMQKNEEKFSSSSSFPTRSPYKIRQVICNKKFHRRSQSPKPF 60
           MYKTYIEDINFVLHQSIKSMQKNEEKFSSSSSFPTRSPYKIRQVICNKKFHRRSQSPKPF
Sbjct: 1   MYKTYIEDINFVLHQSIKSMQKNEEKFSSSSSFPTRSPYKIRQVICNKKFHRRSQSPKPF 60

Query: 61  FAMQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILT 120
           FAMQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILT
Sbjct: 61  FAMQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILT 120

Query: 121 QDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQI 180
           QDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQI
Sbjct: 121 QDLVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQI 180

Query: 181 AGESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGS 240
           AGESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGS
Sbjct: 181 AGESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGS 240

Query: 241 GTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIA 300
           GTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQI 
Sbjct: 241 GTNLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIG 300

Query: 301 YEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFY 360
           YEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFY
Sbjct: 301 YEKETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFY 360

Query: 361 GIEGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 413
           GIEGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI
Sbjct: 361 GIEGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 412

[Close]

BLAST of CsGy5G004090 vs. TrEMBL
Match: tr|A0A1S3ATB9|A0A1S3ATB9_CUCME (L-lactate dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103482619 PE=3 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 8.5e-181
Identity = 335/350 (95.71%), Postives = 339/350 (96.86%), Query Frame = 0


Query: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILTQD 122
           MQKSPSTSSLGPGGLDLSQAFFKPIRDASP STSN NTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MQKSPSTSSLGPGGLDLSQAFFKPIRDASPPSTSNRNTKISVIGAGNVGMAIAQTILTQD 60

Query: 123 LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAG 182
           LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYS TA S+LCIVTAGARQIAG
Sbjct: 61  LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSTTAGSNLCIVTAGARQIAG 120

Query: 183 ESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGT 242
           ESRLNLLQRNV LFQKIVP LVQFSPETILLIVSNPVDVLTYVAWKLSGF SNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFQKIVPPLVQFSPETILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 243 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 302
           NLDSSRFRFLIADHLDVNAQDVQA+IVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 240

Query: 303 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFYGI 362
           KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSV+AKGFYGI
Sbjct: 241 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVLAKGFYGI 300

Query: 363 EGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 413
           +GGDLFLSLPAQLGRGGVLGITNVHLT EESKRLRDSANTIL VQ ELGI
Sbjct: 301 DGGDLFLSLPAQLGRGGVLGITNVHLTAEESKRLRDSANTILQVQTELGI 350

[Close]

BLAST of CsGy5G004090 vs. TrEMBL
Match: tr|A0A067KUG8|A0A067KUG8_JATCU (L-lactate dehydrogenase OS=Jatropha curcas OX=180498 GN=JCGZ_03382 PE=3 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 9.4e-164
Identity = 296/350 (84.57%), Postives = 325/350 (92.86%), Query Frame = 0


Query: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILTQD 122
           MQKSPS S+LGPGGLDL+QAFFKPI++ +P S +  +TKISVIGTGNVGMAIAQTILTQD
Sbjct: 1   MQKSPSASTLGPGGLDLTQAFFKPIQNTAPPSPTKRHTKISVIGTGNVGMAIAQTILTQD 60

Query: 123 LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAG 182
           L DEL LVDAKPDKLRGEMLDLQHAAAFLPRTKI ASTDYS+T  SDLCIVTAGARQI G
Sbjct: 61  LADELALVDAKPDKLRGEMLDLQHAAAFLPRTKIIASTDYSVTVGSDLCIVTAGARQIPG 120

Query: 183 ESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGT 242
           ESRLNLLQRNV LF+KI+P LV +SPE+IL+IVSNPVDVLTY+AWKLSGF SNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFEKIIPPLVNYSPESILMIVSNPVDVLTYIAWKLSGFPSNRVIGSGT 180

Query: 243 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 302
           NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFL+ QQIAYE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLEKQQIAYE 240

Query: 303 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFYGI 362
           KETLE IHK VI  AYEVINLKGYTSWAIGYS A+LARS+LRDQR+IHPVSV+AKGFYGI
Sbjct: 241 KETLENIHKAVIDSAYEVINLKGYTSWAIGYSAANLARSLLRDQRKIHPVSVLAKGFYGI 300

Query: 363 EGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 413
           +GG++FLSLPAQLGRGGVLG+TNVHLT EE++RLR+SA T+L VQ++LGI
Sbjct: 301 DGGEVFLSLPAQLGRGGVLGVTNVHLTEEEARRLRESAKTLLEVQSQLGI 350

[Close]

BLAST of CsGy5G004090 vs. TrEMBL
Match: tr|A0A1Q3CTN4|A0A1Q3CTN4_CEPFO (L-lactate dehydrogenase OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_26880 PE=3 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 5.2e-162
Identity = 297/350 (84.86%), Postives = 321/350 (91.71%), Query Frame = 0


Query: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILTQD 122
           MQKSPSTSSLGPGGLDL+ AFFKPI   +P S +   TKISVIGTGNVGMAIAQTILTQD
Sbjct: 1   MQKSPSTSSLGPGGLDLTPAFFKPIHSTAPPSLTKRQTKISVIGTGNVGMAIAQTILTQD 60

Query: 123 LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAG 182
           L DEL LVDA PDKLRGEMLDLQHAAAFLPRTKI+AS DY++T  SDLCIVTAGARQIAG
Sbjct: 61  LADELALVDANPDKLRGEMLDLQHAAAFLPRTKINASVDYAVTVASDLCIVTAGARQIAG 120

Query: 183 ESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGT 242
           ESRLNLLQRNV LF+ IVP LV++SP+ ILLIVSNPVDVLTYVAWKLSGF SNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFKNIVPPLVKYSPDAILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 243 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 302
           NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFL+  QI YE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLEKHQIGYE 240

Query: 303 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFYGI 362
           KETLEKIHKEVI GAYEVI LKGYTSWAIGYSVA+LARS+LRDQR+IHPVSV+AKGFYGI
Sbjct: 241 KETLEKIHKEVIDGAYEVICLKGYTSWAIGYSVANLARSLLRDQRKIHPVSVLAKGFYGI 300

Query: 363 EGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 413
           EGG++FLSLPAQLGRGGVLG+TNVHLT EE++RLR+SA TIL +Q++L I
Sbjct: 301 EGGNVFLSLPAQLGRGGVLGVTNVHLTDEEAERLRNSAKTILEMQSQLDI 350

[Close]

BLAST of CsGy5G004090 vs. TrEMBL
Match: tr|A0A1R3GNR2|A0A1R3GNR2_COCAP (L-lactate dehydrogenase OS=Corchorus capsularis OX=210143 GN=CCACVL1_24669 PE=3 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 2.0e-161
Identity = 293/350 (83.71%), Postives = 317/350 (90.57%), Query Frame = 0


Query: 63  MQKSPSTSSLGPGGLDLSQAFFKPIRDASPLSTSNCNTKISVIGTGNVGMAIAQTILTQD 122
           M KSPS SSLGPGGLDLSQAFFKPI+  +P S +  NTKISVIG GNVGMAIAQTILTQD
Sbjct: 1   MHKSPSGSSLGPGGLDLSQAFFKPIQSTAPPSATKRNTKISVIGVGNVGMAIAQTILTQD 60

Query: 123 LVDELVLVDAKPDKLRGEMLDLQHAAAFLPRTKISASTDYSITARSDLCIVTAGARQIAG 182
           L DE+ LVDAK DKLRGEMLDLQHAAAFLPRTKI+AS DYS+TA SDLCIVTAGARQ  G
Sbjct: 61  LADEIALVDAKEDKLRGEMLDLQHAAAFLPRTKINASVDYSVTAGSDLCIVTAGARQNPG 120

Query: 183 ESRLNLLQRNVTLFQKIVPLLVQFSPETILLIVSNPVDVLTYVAWKLSGFSSNRVIGSGT 242
           ESRLNLLQRNV LF KI+P LVQ+SP+TILLIVSNPVDVLTYVAWKLSGF SNRVIGSGT
Sbjct: 121 ESRLNLLQRNVALFSKIIPPLVQYSPDTILLIVSNPVDVLTYVAWKLSGFPSNRVIGSGT 180

Query: 243 NLDSSRFRFLIADHLDVNAQDVQAFIVGEHGDSSVALWSSISVGGVPILSFLKNQQIAYE 302
           NLDSSRFRFLIADHLDVNAQDVQA+I+GEHGDSSVALWSSIS+GGVP+LSFLKNQQI YE
Sbjct: 181 NLDSSRFRFLIADHLDVNAQDVQAYIIGEHGDSSVALWSSISIGGVPVLSFLKNQQIVYE 240

Query: 303 KETLEKIHKEVIGGAYEVINLKGYTSWAIGYSVASLARSILRDQRRIHPVSVIAKGFYGI 362
           KETLE IHKEV+  AYEVI+LKGYTSWAIGYS A+LARSILRDQR+IHPVSV+AKGFYGI
Sbjct: 241 KETLENIHKEVVNSAYEVISLKGYTSWAIGYSAANLARSILRDQRKIHPVSVLAKGFYGI 300

Query: 363 EGGDLFLSLPAQLGRGGVLGITNVHLTTEESKRLRDSANTILHVQAELGI 413
            GGD+FLSLPA LGRGGVLG+TNVH T EE +RLR SA TIL VQ++LG+
Sbjct: 301 NGGDVFLSLPALLGRGGVLGVTNVHFTKEEEQRLRKSAETILEVQSQLGL 350

The following BLAST results are available for this feature:

BLAST of CsGy5G004090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654796.1	2.0e-226	99.76	PREDICTED: L-lactate dehydrogenase B-like [Cucumis sativus] >KGN50243.1 hypothet...	[more]
XP_008437100.2	1.3e-180	95.71	PREDICTED: L-lactate dehydrogenase A [Cucumis melo]	[more]
XP_004151663.2	2.3e-177	94.00	PREDICTED: LOW QUALITY PROTEIN: L-lactate dehydrogenase A-like [Cucumis sativus]	[more]
XP_022958393.1	5.2e-174	91.71	L-lactate dehydrogenase A-like [Cucurbita moschata]	[more]
XP_023534013.1	5.2e-174	91.43	L-lactate dehydrogenase A-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy5G004090 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17260.1	8.0e-153	76.20	Lactate/malate dehydrogenase family protein	[more]

BLAST of CsGy5G004090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P22988\|LDHA_HORVU	2.8e-123	66.38	L-lactate dehydrogenase A OS=Hordeum vulgare OX=4513 PE=1 SV=1	[more]
sp\|P22989\|LDHB_HORVU	1.4e-122	66.67	L-lactate dehydrogenase B (Fragment) OS=Hordeum vulgare OX=4513 PE=1 SV=1	[more]
sp\|P29038\|LDH_MAIZE	7.5e-116	64.64	L-lactate dehydrogenase OS=Zea mays OX=4577 PE=2 SV=1	[more]
sp\|P06151\|LDHA_MOUSE	2.0e-92	56.13	L-lactate dehydrogenase A chain OS=Mus musculus OX=10090 GN=Ldha PE=1 SV=3	[more]
sp\|Q9XT87\|LDHA_MONDO	4.4e-92	55.13	L-lactate dehydrogenase A chain OS=Monodelphis domestica OX=13616 GN=LDHA PE=2 S...	[more]

BLAST of CsGy5G004090 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KKU9\|A0A0A0KKU9_CUCSA	1.3e-226	99.76	L-lactate dehydrogenase OS=Cucumis sativus OX=3659 GN=Csa_5G161920 PE=3 SV=1	[more]
tr\|A0A1S3ATB9\|A0A1S3ATB9_CUCME	8.5e-181	95.71	L-lactate dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103482619 PE=3 SV=1	[more]
tr\|A0A067KUG8\|A0A067KUG8_JATCU	9.4e-164	84.57	L-lactate dehydrogenase OS=Jatropha curcas OX=180498 GN=JCGZ_03382 PE=3 SV=1	[more]
tr\|A0A1Q3CTN4\|A0A1Q3CTN4_CEPFO	5.2e-162	84.86	L-lactate dehydrogenase OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_26880 PE=3...	[more]
tr\|A0A1R3GNR2\|A0A1R3GNR2_COCAP	2.0e-161	83.71	L-lactate dehydrogenase OS=Corchorus capsularis OX=210143 GN=CCACVL1_24669 PE=3 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity
GO:0004459	L-lactate dehydrogenase activity
GO:0003824	catalytic activity
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process
GO:0055114	oxidation-reduction process
GO:0019752	carboxylic acid metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR036291	NAD(P)-bd_dom_sf
IPR018177	L-lactate_DH_AS
IPR001236	Lactate/malate_DH_N
IPR011304	L-lactate_DH
IPR015955	Lactate_DH/Glyco_Ohase_4_C
IPR022383	Lactate/malate_DH_C
IPR001557	L-lactate/malate_DH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0019752	carboxylic acid metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004459	L-lactate dehydrogenase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G004090.1	CsGy5G004090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001557	L-lactate/malate dehydrogenase	PRINTS	PR00086	LLDHDRGNASE	coord: 126..150 score: 51.92 coord: 237..255 score: 68.42 coord: 213..233 score: 67.56 coord: 101..125 score: 47.76 coord: 267..280 score: 65.98
IPR022383	Lactate/malate dehydrogenase, C-terminal	PFAM	PF02866	Ldh_1_C	coord: 242..404 e-value: 2.6E-24 score: 85.9
None	No IPR available	GENE3D	G3DSA:3.40.50.720		coord: 85..241 e-value: 2.8E-61 score: 207.9
None	No IPR available	PANTHER	PTHR43128:SF12	SUBFAMILY NOT NAMED	coord: 66..412
None	No IPR available	PANTHER	PTHR43128	FAMILY NOT NAMED	coord: 66..412
None	No IPR available	CDD	cd05293	LDH_1	coord: 97..407 e-value: 1.52895E-170 score: 482.104
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	GENE3D	G3DSA:3.90.110.10		coord: 242..411 e-value: 1.6E-62 score: 212.0
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal	SUPERFAMILY	SSF56327	LDH C-terminal domain-like	coord: 240..409
IPR011304	L-lactate dehydrogenase	TIGRFAM	TIGR01771	TIGR01771	coord: 104..403 e-value: 4.0E-114 score: 378.9
IPR011304	L-lactate dehydrogenase	HAMAP	MF_00488	Lactate_dehydrog	coord: 99..411 score: 36.611
IPR001236	Lactate/malate dehydrogenase, N-terminal	PFAM	PF00056	Ldh_1_N	coord: 100..239 e-value: 1.3E-41 score: 141.9
IPR018177	L-lactate dehydrogenase, active site	PROSITE	PS00064	L_LDH	coord: 269..275
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 88..239

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G004090	CmoCh02G015870	Cucurbita moschata (Rifu)	cgybcmoB619
CsGy5G004090	Cp4.1LG05g02440	Cucurbita pepo (Zucchini)	cgybcpeB687

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G004090	Cucumber (Gy14) v2	cgybcgybB090
CsGy5G004090	Cucurbita maxima (Rimu)	cgybcmaB608
CsGy5G004090	Cucurbita maxima (Rimu)	cgybcmaB640
CsGy5G004090	Cucurbita maxima (Rimu)	cgybcmaB695
CsGy5G004090	Cucurbita moschata (Rifu)	cgybcmoB583
CsGy5G004090	Cucurbita moschata (Rifu)	cgybcmoB675
CsGy5G004090	Cucurbita pepo (Zucchini)	cgybcpeB597
CsGy5G004090	Cucurbita pepo (Zucchini)	cgybcpeB702
CsGy5G004090	Cucumber (Chinese Long) v2	cgybcuB211
CsGy5G004090	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G004090	Bottle gourd (USVL1VR-Ls)	cgyblsiB294
CsGy5G004090	Bottle gourd (USVL1VR-Ls)	cgyblsiB352
CsGy5G004090	Melon (DHL92) v3.5.1	cgybmeB298
CsGy5G004090	Melon (DHL92) v3.5.1	cgybmeB348
CsGy5G004090	Melon (DHL92) v3.6.1	cgybmedB298
CsGy5G004090	Watermelon (Charleston Gray)	cgybwcgB326
CsGy5G004090	Watermelon (Charleston Gray)	cgybwcgB332
CsGy5G004090	Watermelon (97103) v1	cgybwmB381
CsGy5G004090	Watermelon (97103) v1	cgybwmB348
CsGy5G004090	Wild cucumber (PI 183967)	cgybcpiB212
CsGy5G004090	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G004090	Silver-seed gourd	carcgybB0549
CsGy5G004090	Silver-seed gourd	carcgybB0911
CsGy5G004090	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G004090	Watermelon (97103) v2	cgybwmbB319
CsGy5G004090	Watermelon (97103) v2	cgybwmbB339
CsGy5G004090	Wax gourd	cgybwgoB414