CsGy4G021450.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTTTTTTTTTTTACCCCCCCATGTGGGTTCTGTTTGTCGAGAGTCTCTTATGCTTTGTTAAGTGGAAACAGTGACTTTGTTTCAGATGGATTAGAAACTAGGATGTGTTTGAATTTTGGTTTGCGTTTTGAAGTCTAGATGGAAGATGATAGGAATGGCAGAAGAGGAGCAAAAACAGAGGTGTTATAATAATAGATTTGGGAGTTTTGGGACAATTGGTGGTATTAGTGGTAGATCTTCTTCTAAGAAACTTAAACCAAAGCCTAAGAAAGTTCCACAAAGAGGACTTGGCGTTGCACAGCTTGAGAAGATTAGATTAGAGGAACAACAGAAGAATGATGCAGCTGCTGCAATTTTCTCATCTTCTTCTCCATTGTCACCAACCAAATCCTCCTCTTATTTGTCTTTACCGATTCCTAGTTTTCTCCAATCAAACCGATCATCATCTTCGTCGTCTTTCCCTTCGTCACCTCCGGTGAATCTCTCCTCGTCCGCCTCAATGTTTGGGCCACCTCTGCCTGTTTTAAACATGCATGTTAAAGATTCTTTCACTGTTCCATTGATGGATCAAGCAAATAGTGGTGGATCTGAAACTGGGTTGTCTGCAGTTACAATTTTGGAGCAAGGAAATGCTCTCAAATGGCAAAATTCTTGTGATTACTATCTTGAGAAGGAAAATTATGGGGTTGATCCTGGGTTGGCACTTCGTTCAGATTTTGATTTCCCTTATGGAGTTAACCCTGGCTTGCCTTCTACAAAACTCCTGCAAAGATCACAGGAAAATCAAGCACCTTCTCCCATGGTAATGCAGAAGCTTTTTTTGTTTTCTTTGACTGTCTATGCAATACCTCTTGAATAAGGAGACTGATTTGATTAATGGAACTTGCAGGTGAATCTGTCATCAACAACTTCAATGTCTTCTGGTCTTAATGTCCAGATAGAGCCCCCTTCAAACCAAAGCTATTGTTATGGCAACTACTCAACCATCTGGCCAGACAAGGAAGAGAAGGTGACTTCAATTACTTTACTTGGATTTATTTTCATTATGATTGTGTAAATAATTCAGCCACCACTGAAAAATGCTGTGCATTAGTATATAGTTTGACTCATGGTCAAAATAAGTGCTGTAAAGTTTTGGAACTCACCACTGAAAAATGCTGTATTTGTCGAAATGTGTGAATGATTGTGTGAATTATGTACATACAGATGTTCGGCACGAAGAGATTGCCTCGCTTTTCTCCAAACAATCCAACTGAACCGGTGTTTGATCACAACTCTTCCTTCACTGTTCCAAATAGATCCGATGATTCAACATCACATGGCAATGGAAGCGCACTGAGTTTTCGGTAAAACACTGTCTGATTTGATCATGCTTTATATGCTTTAGATATGGTGCCATAGTTGCCCGAATTGTTTTTCCAATATGCAGAGAGGATCGTGCTCGGAGCTTAACATGCGTATCTGCACCGAGTTCCTTGGAACACATCAAAGACGATGACTTTAATGGAAACTTCCTTACCCTTGCTTCTCTTGCTACTTGTTGGACATCATGTTCAAGCTCTAAGATTGCTAAGTGTCCTCCAACCTATCCTCTTCTTCAGAATCTTAGGAATTCCAATTCGGAACCACATTCTTCTCAGGTAAGAAAAGAGTGAGTGAGTGCATAATGGTTTGTCCTTTGATGTTCTATCATTTGCTGAATTTCATTTTTTTTTATTGATATGTCAAAGGGAGGATTAAAACCTGTCAGATTGGCCGAAAAGCAGCCTTTCTATAGCTTCCTCCCACCTGCAGAGACAAAAACTGGGAAAGAAACTGCCATTTCTAAAACCAAGTGCAATGGGGAAGTAGGAGAAATACTTGATCTAGATTTGAAGTTGTAGAAGCTAGAGCTTAATGTTATGTTGTAGCCACAGTGGTGGGTGTTCATACAATAGATATCCTCATTGCTACAAAACCTGTATGTTACCCTTTTGCAAGCTCTGTTTTTGGTTAAACTAGATAGGTTTAAATTATGCTGTTTTGTGTAAGAAACCCAAAATCCTAGCCTGAAGTTGGTTTCTTGGGTACCTTTTTCTGCTATTAGTTTTTTGTTTTTCATTTCTGCAAACCACAGTTTTGATGTCAGTTTCAAAGTCAAAAAAATTAAAAACTAGATTTGAAATTCTGATCTCCTGTTCTATTTCTAACATTTCTCTCTTTACCATTTCTTTTCCCTGTTCTTTGCAAATTCTCTTTCTCAAAAAC TTTTTTTTTTTTTTTTTTACCCCCCCATGTGGGTTCTGTTTGTCGAGAGTCTCTTATGCTTTGTTAAGTGGAAACAGTGACTTTGTTTCAGATGGATTAGAAACTAGGATGTGTTTGAATTTTGGTTTGCGTTTTGAAGTCTAGATGGAAGATGATAGGAATGGCAGAAGAGGAGCAAAAACAGAGGTGTTATAATAATAGATTTGGGAGTTTTGGGACAATTGGTGGTATTAGTGGTAGATCTTCTTCTAAGAAACTTAAACCAAAGCCTAAGAAAGTTCCACAAAGAGGACTTGGCGTTGCACAGCTTGAGAAGATTAGATTAGAGGAACAACAGAAGAATGATGCAGCTGCTGCAATTTTCTCATCTTCTTCTCCATTGTCACCAACCAAATCCTCCTCTTATTTGTCTTTACCGATTCCTAGTTTTCTCCAATCAAACCGATCATCATCTTCGTCGTCTTTCCCTTCGTCACCTCCGGTGAATCTCTCCTCGTCCGCCTCAATGTTTGGGCCACCTCTGCCTGTTTTAAACATGCATGTTAAAGATTCTTTCACTGTTCCATTGATGGATCAAGCAAATAGTGGTGGATCTGAAACTGGGTTGTCTGCAGTTACAATTTTGGAGCAAGGAAATGCTCTCAAATGGCAAAATTCTTGTGATTACTATCTTGAGAAGGAAAATTATGGGGTTGATCCTGGGTTGGCACTTCGTTCAGATTTTGATTTCCCTTATGGAGTTAACCCTGGCTTGCCTTCTACAAAACTCCTGCAAAGATCACAGGAAAATCAAGCACCTTCTCCCATGGTGAATCTGTCATCAACAACTTCAATGTCTTCTGGTCTTAATGTCCAGATAGAGCCCCCTTCAAACCAAAGCTATTGTTATGGCAACTACTCAACCATCTGGCCAGACAAGGAAGAGAAGATGTTCGGCACGAAGAGATTGCCTCGCTTTTCTCCAAACAATCCAACTGAACCGGTGTTTGATCACAACTCTTCCTTCACTGTTCCAAATAGATCCGATGATTCAACATCACATGGCAATGGAAGCGCACTGAGTTTTCGAGAGGATCGTGCTCGGAGCTTAACATGCGTATCTGCACCGAGTTCCTTGGAACACATCAAAGACGATGACTTTAATGGAAACTTCCTTACCCTTGCTTCTCTTGCTACTTGTTGGACATCATGTTCAAGCTCTAAGATTGCTAAGTGTCCTCCAACCTATCCTCTTCTTCAGAATCTTAGGAATTCCAATTCGGAACCACATTCTTCTCAGGGAGGATTAAAACCTGTCAGATTGGCCGAAAAGCAGCCTTTCTATAGCTTCCTCCCACCTGCAGAGACAAAAACTGGGAAAGAAACTGCCATTTCTAAAACCAAGTGCAATGGGGAAGTAGGAGAAATACTTGATCTAGATTTGAAGTTGTAGAAGCTAGAGCTTAATGTTATGTTGTAGCCACAGTGGTGGGTGTTCATACAATAGATATCCTCATTGCTACAAAACCTGTATGTTACCCTTTTGCAAGCTCTGTTTTTGGTTAAACTAGATAGGTTTAAATTATGCTGTTTTGTGTAAGAAACCCAAAATCCTAGCCTGAAGTTGGTTTCTTGGGTACCTTTTTCTGCTATTAGTTTTTTGTTTTTCATTTCTGCAAACCACAGTTTTGATGTCAGTTTCAAAGTCAAAAAAATTAAAAACTAGATTTGAAATTCTGATCTCCTGTTCTATTTCTAACATTTCTCTCTTTACCATTTCTTTTCCCTGTTCTTTGCAAATTCTCTTTCTCAAAAAC ATGATAGGAATGGCAGAAGAGGAGCAAAAACAGAGGTGTTATAATAATAGATTTGGGAGTTTTGGGACAATTGGTGGTATTAGTGGTAGATCTTCTTCTAAGAAACTTAAACCAAAGCCTAAGAAAGTTCCACAAAGAGGACTTGGCGTTGCACAGCTTGAGAAGATTAGATTAGAGGAACAACAGAAGAATGATGCAGCTGCTGCAATTTTCTCATCTTCTTCTCCATTGTCACCAACCAAATCCTCCTCTTATTTGTCTTTACCGATTCCTAGTTTTCTCCAATCAAACCGATCATCATCTTCGTCGTCTTTCCCTTCGTCACCTCCGGTGAATCTCTCCTCGTCCGCCTCAATGTTTGGGCCACCTCTGCCTGTTTTAAACATGCATGTTAAAGATTCTTTCACTGTTCCATTGATGGATCAAGCAAATAGTGGTGGATCTGAAACTGGGTTGTCTGCAGTTACAATTTTGGAGCAAGGAAATGCTCTCAAATGGCAAAATTCTTGTGATTACTATCTTGAGAAGGAAAATTATGGGGTTGATCCTGGGTTGGCACTTCGTTCAGATTTTGATTTCCCTTATGGAGTTAACCCTGGCTTGCCTTCTACAAAACTCCTGCAAAGATCACAGGAAAATCAAGCACCTTCTCCCATGGTGAATCTGTCATCAACAACTTCAATGTCTTCTGGTCTTAATGTCCAGATAGAGCCCCCTTCAAACCAAAGCTATTGTTATGGCAACTACTCAACCATCTGGCCAGACAAGGAAGAGAAGATGTTCGGCACGAAGAGATTGCCTCGCTTTTCTCCAAACAATCCAACTGAACCGGTGTTTGATCACAACTCTTCCTTCACTGTTCCAAATAGATCCGATGATTCAACATCACATGGCAATGGAAGCGCACTGAGTTTTCGAGAGGATCGTGCTCGGAGCTTAACATGCGTATCTGCACCGAGTTCCTTGGAACACATCAAAGACGATGACTTTAATGGAAACTTCCTTACCCTTGCTTCTCTTGCTACTTGTTGGACATCATGTTCAAGCTCTAAGATTGCTAAGTGTCCTCCAACCTATCCTCTTCTTCAGAATCTTAGGAATTCCAATTCGGAACCACATTCTTCTCAGGGAGGATTAAAACCTGTCAGATTGGCCGAAAAGCAGCCTTTCTATAGCTTCCTCCCACCTGCAGAGACAAAAACTGGGAAAGAAACTGCCATTTCTAAAACCAAGTGCAATGGGGAAGTAGGAGAAATACTTGATCTAGATTTGAAGTTGTAG MIGMAEEEQKQRCYNNRFGSFGTIGGISGRSSSKKLKPKPKKVPQRGLGVAQLEKIRLEEQQKNDAAAAIFSSSSPLSPTKSSSYLSLPIPSFLQSNRSSSSSSFPSSPPVNLSSSASMFGPPLPVLNMHVKDSFTVPLMDQANSGGSETGLSAVTILEQGNALKWQNSCDYYLEKENYGVDPGLALRSDFDFPYGVNPGLPSTKLLQRSQENQAPSPMVNLSSTTSMSSGLNVQIEPPSNQSYCYGNYSTIWPDKEEKMFGTKRLPRFSPNNPTEPVFDHNSSFTVPNRSDDSTSHGNGSALSFREDRARSLTCVSAPSSLEHIKDDDFNGNFLTLASLATCWTSCSSSKIAKCPPTYPLLQNLRNSNSEPHSSQGGLKPVRLAEKQPFYSFLPPAETKTGKETAISKTKCNGEVGEILDLDLKL
BLAST of CsGy4G021450.1 vs. NCBI nr
Match: XP_004146098.2 (PREDICTED: uncharacterized protein LOC101205113 [Cucumis sativus] >KGN55086.1 hypothetical protein Csa_4G628340 [Cucumis sativus]) HSP 1 Score: 773.9 bits (1997), Expect = 2.9e-220 Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0
BLAST of CsGy4G021450.1 vs. NCBI nr
Match: XP_008463720.1 (PREDICTED: uncharacterized protein LOC103501800 isoform X2 [Cucumis melo]) HSP 1 Score: 713.4 bits (1840), Expect = 4.7e-202 Identity = 399/426 (93.66%), Postives = 409/426 (96.01%), Query Frame = 0
BLAST of CsGy4G021450.1 vs. NCBI nr
Match: XP_008463719.1 (PREDICTED: uncharacterized protein LOC103501800 isoform X1 [Cucumis melo]) HSP 1 Score: 708.4 bits (1827), Expect = 1.5e-200 Identity = 399/428 (93.22%), Postives = 409/428 (95.56%), Query Frame = 0
BLAST of CsGy4G021450.1 vs. NCBI nr
Match: XP_023523897.1 (uncharacterized protein LOC111788000 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 510.0 bits (1312), Expect = 7.8e-141 Identity = 289/431 (67.05%), Postives = 325/431 (75.41%), Query Frame = 0
BLAST of CsGy4G021450.1 vs. NCBI nr
Match: XP_023523896.1 (uncharacterized protein LOC111788000 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 505.0 bits (1299), Expect = 2.5e-139 Identity = 289/433 (66.74%), Postives = 325/433 (75.06%), Query Frame = 0
BLAST of CsGy4G021450.1 vs. TrEMBL
Match: tr|A0A0A0L4M5|A0A0A0L4M5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G628340 PE=4 SV=1) HSP 1 Score: 773.9 bits (1997), Expect = 1.9e-220 Identity = 426/426 (100.00%), Postives = 426/426 (100.00%), Query Frame = 0
BLAST of CsGy4G021450.1 vs. TrEMBL
Match: tr|A0A1S3CKD8|A0A1S3CKD8_CUCME (uncharacterized protein LOC103501800 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501800 PE=4 SV=1) HSP 1 Score: 713.4 bits (1840), Expect = 3.1e-202 Identity = 399/426 (93.66%), Postives = 409/426 (96.01%), Query Frame = 0
BLAST of CsGy4G021450.1 vs. TrEMBL
Match: tr|A0A1S3CJX1|A0A1S3CJX1_CUCME (uncharacterized protein LOC103501800 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501800 PE=4 SV=1) HSP 1 Score: 708.4 bits (1827), Expect = 9.9e-201 Identity = 399/428 (93.22%), Postives = 409/428 (95.56%), Query Frame = 0
BLAST of CsGy4G021450.1 vs. TrEMBL
Match: tr|A0A2I4ETG8|A0A2I4ETG8_9ROSI (uncharacterized protein LOC108992536 OS=Juglans regia OX=51240 GN=LOC108992536 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 3.9e-48 Identity = 174/442 (39.37%), Postives = 233/442 (52.71%), Query Frame = 0
BLAST of CsGy4G021450.1 vs. TrEMBL
Match: tr|A0A061F777|A0A061F777_THECC (Actin cytoskeleton-regulatory complex protein pan1, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_031704 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 2.0e-47 Identity = 192/458 (41.92%), Postives = 240/458 (52.40%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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