CsGy4G020990.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCTCTGTGGAATTTGGAAGACAAATGGAAGCTCTCAACCCAACAAGCCTTCGTTCTCTTAACGTGCACGGTGGCCGCCGTCATTGGGCTCTGTGCGGCCGCGTGGGCCAAGAAGAGAAAGGGGGAGAAGAAAGCCCACCCACGACGGACAGATCAGAGGTGGTGGAAATGGCCGGCAGCGGAAAGTAGGCGGAAGGGGAGCGGCGGCGGAGAGACACCGGTGCGGCTTTTGGGCAGAGAAGAGGAAGGGGAAGAATTGGGAAGCCGGAATTCGACGGCAGCGGTGTGGCAACGGCCGATATTAATGGGGGAAAAGTGTGAGATGCTGAAGTACAGTGGGCTTATTCTGTATGACGAAAGGGGAAGATTGCTGCAGGAACAAATTGCCGCCATGGAAAATGGTTACAAGGTGCTGCTCCGTAAGTTATTTGGGAGATTTGAACACACAAACCTTTTTAAGATTTTTTTTAACAATTCTAAACTTTTCGATAACTTTTTCAAATCTTATTAAGGAAAGTGACAATTACTAACTCTTTCAAAGGCTATACATTTTGAAGAGATGTTCGATCTCTCATACTCACAATTCTTTTAGTAACAAATCCAAAGAAAAAATATGTTAGAAAAATCAGTGAATGTGATTATTATTGTTTAAACGTCAGAGTTGGAATTTCAACAAAGGATTTCCAATGGTTAATTAATGGACAAGTTTTTATTTTTTTTCTCCTTTAAGTAAATTAATGGACAAGTTAGCCTAAACTAAAATTGTTATTTAGTGATAATAGCTTCCAAACAAAGTAATCATGACCTACTATCATTATTCAAATGTACTATAACACATTTAAATATATAAAGAGATAAGATTTTCTAGTATTTAATTGAGTTTTTTTCTTTTGTTGATAAATTATGTATTGTTCTTTTAAAGTATATCTATTATCACAAAAAATAAAATTAATCAACTAATTAGGAGGTAAGAGAGATATGAGTGTTTTGACTCAAGAAAGAAAATGAGTATATGTCATTTGGTGTTTGTACTTTTTCTCCTGTCTTTTAACATCGCATGTGTTGTTTGATTGATTACATGTAGGAAGGAGAAGTCATAAAAGTAAAGACAAGGTTGAAGGATCTACTTTGATGCTCTTTCTCTATGATGGGAATTTTAAGAAAAGAGGTGTATAAATTATACAAAGGGGTGAGCTTTTCCAATGTAATATTCCTTTCTTCTTTTTGATAGATTATCTCCTAATAACTTTTCTTTCTTTTCTCTTTTTACACATTATCCACTTCTCTTGCTTTCATTTTCTTTTGTGATCTTTAGACAATTATCAAGTATGATGTAAAATGGAACAAAAGTAGCAGCTGAATAAGTTCGAAACAAGTGCAAGATGTATCTATCGACATATAGCCGAACTTAGCCAGGTTTAAATCCAAGCTCTATCCCAAATCAATGAGTAAAATTGGAAGAAGAACCTACTGGGGATGGTTAAACTTCATTCGTTGTCCTTTCTTTAGGTTCTTATTTGATACAAGATTCTTCAAATCCAAACAGTTCGTAGCAAAATCAGAGAGAGAGAGAGAGCGAGAGAGAGTGGAGCAGCAGAGCATTGGAACAAAGCTTTTAAATCACAAGGCTAAAAAATATTACAACATTCTTCACTCTTGAGAATTTCGGGTTGGTTGTCTAAAAATACACCATTTAACTGATTGGTGGGTTGAAAAAACAAACCAATCAATCAAAATGGAGAAATTAATGGAGAGGGTAATTTTACAGCAAAACACAATGTAGCCCGAGAACGGCTCGTTGGCTAACAACGAACTGCACACCAATGCTGTGGAAGAACCAATTATCAAACCCTTGGAAATCTGTTGTTCCTGCGGTATATGAAAAACATTTTCAGATTGGCTATTTTCCTATTTTCCACACCATGTCCTAAGGATAATAGGAATCCAAAAAACTAGATCGTTAAGTTCGGTAGCTAACAAGGATAGATGATAAAGTAGATGGAAATTGAAATCTTACCTCATTATCATGATGTAAATACACAATGTACATATCTACGCATAGGATACAATTAGAGGTTCTCTAGACTCCTCTCTAGCAACTCGACTGAAGTAGCAATACAACACCAATTGAACACTCCCCAACAGAGTTCCTATCCCATTTGGGGCCTGAAGTATGGCAGGAAAAACATTTACGTCACATAATAAATGGAGTAAAAGCACAATGAACAACGGAAATGGGTAGGATAATGCTTACATAAACGAATAGATCGTAATTG ATGGAAGCTCTGTGGAATTTGGAAGACAAATGGAAGCTCTCAACCCAACAAGCCTTCGTTCTCTTAACGTGCACGGTGGCCGCCGTCATTGGGCTCTGTGCGGCCGCGTGGGCCAAGAAGAGAAAGGGGGAGAAGAAAGCCCACCCACGACGGACAGATCAGAGGTGGTGGAAATGGCCGGCAGCGGAAAGTAGGCGGAAGGGGAGCGGCGGCGGAGAGACACCGGTGCGGCTTTTGGGCAGAGAAGAGGAAGGGGAAGAATTGGGAAGCCGGAATTCGACGGCAGCGGTGTGGCAACGGCCGATATTAATGGGGGAAAAGTGTGAGATGCTGAAGTACAGTGGGCTTATTCTGTATGACGAAAGGGGAAGATTGCTGCAGGAACAAATTGCCGCCATGGAAAATGGAAGGAGAAGTCATAAAAGTAAAGACAAGGTTGAAGGATCTACTTTGATGCTCTTTCTCTATGATGGGAATTTTAAGAAAAGAGGTGTATAAATTATACAAAGGGGTGAGCTTTTCCAATGTAATATTCCTTTCTTCTTTTTGATAGATTATCTCCTAATAACTTTTCTTTCTTTTCTCTTTTTACACATTATCCACTTCTCTTGCTTTCATTTTCTTTTGTGATCTTTAGACAATTATCAAGTATGATGTAAAATGGAACAAAAGTAGCAGCTGAATAAGTTCGAAACAAGTGCAAGATGTATCTATCGACATATAGCCGAACTTAGCCAGGTTTAAATCCAAGCTCTATCCCAAATCAATGAGTAAAATTGGAAGAAGAACCTACTGGGGATGGTTAAACTTCATTCGTTGTCCTTTCTTTAGGTTCTTATTTGATACAAGATTCTTCAAATCCAAACAGTTCGTAGCAAAATCAGAGAGAGAGAGAGAGCGAGAGAGAGTGGAGCAGCAGAGCATTGGAACAAAGCTTTTAAATCACAAGGCTAAAAAATATTACAACATTCTTCACTCTTGAGAATTTCGGGTTGGTTGTCTAAAAATACACCATTTAACTGATTGGTGGGTTGAAAAAACAAACCAATCAATCAAAATGGAGAAATTAATGGAGAGGGTAATTTTACAGCAAAACACAATGTAGCCCGAGAACGGCTCGTTGGCTAACAACGAACTGCACACCAATGCTGTGGAAGAACCAATTATCAAACCCTTGGAAATCTGTTGTTCCTGCGGTATATGAAAAACATTTTCAGATTGGCTATTTTCCTATTTTCCACACCATGTCCTAAGGATAATAGGAATCCAAAAAACTAGATCGTTAAGTTCGGTAGCTAACAAGGATAGATGATAAAGTAGATGGAAATTGAAATCTTACCTCATTATCATGATGTAAATACACAATGTACATATCTACGCATAGGATACAATTAGAGGTTCTCTAGACTCCTCTCTAGCAACTCGACTGAAGTAGCAATACAACACCAATTGAACACTCCCCAACAGAGTTCCTATCCCATTTGGGGCCTGAAGTATGGCAGGAAAAACATTTACGTCACATAATAAATGGAGTAAAAGCACAATGAACAACGGAAATGGGTAGGATAATGCTTACATAAACGAATAGATCGTAATTG ATGGAAGCTCTGTGGAATTTGGAAGACAAATGGAAGCTCTCAACCCAACAAGCCTTCGTTCTCTTAACGTGCACGGTGGCCGCCGTCATTGGGCTCTGTGCGGCCGCGTGGGCCAAGAAGAGAAAGGGGGAGAAGAAAGCCCACCCACGACGGACAGATCAGAGGTGGTGGAAATGGCCGGCAGCGGAAAGTAGGCGGAAGGGGAGCGGCGGCGGAGAGACACCGGTGCGGCTTTTGGGCAGAGAAGAGGAAGGGGAAGAATTGGGAAGCCGGAATTCGACGGCAGCGGTGTGGCAACGGCCGATATTAATGGGGGAAAAGTGTGAGATGCTGAAGTACAGTGGGCTTATTCTGTATGACGAAAGGGGAAGATTGCTGCAGGAACAAATTGCCGCCATGGAAAATGGAAGGAGAAGTCATAAAAGTAAAGACAAGGTTGAAGGATCTACTTTGATGCTCTTTCTCTATGATGGGAATTTTAAGAAAAGAGGTGTATAA MEALWNLEDKWKLSTQQAFVLLTCTVAAVIGLCAAAWAKKRKGEKKAHPRRTDQRWWKWPAAESRRKGSGGGETPVRLLGREEEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGRRSHKSKDKVEGSTLMLFLYDGNFKKRGV
BLAST of CsGy4G020990.1 vs. NCBI nr
Match: KGN55027.1 (hypothetical protein Csa_4G622860 [Cucumis sativus]) HSP 1 Score: 276.9 bits (707), Expect = 4.3e-71 Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 0
BLAST of CsGy4G020990.1 vs. NCBI nr
Match: XP_011654026.1 (PREDICTED: uncharacterized protein LOC105435286 [Cucumis sativus]) HSP 1 Score: 276.9 bits (707), Expect = 4.3e-71 Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 0
BLAST of CsGy4G020990.1 vs. NCBI nr
Match: XP_008465611.1 (PREDICTED: uncharacterized protein LOC103503252 [Cucumis melo]) HSP 1 Score: 250.0 bits (637), Expect = 5.7e-63 Identity = 127/137 (92.70%), Postives = 130/137 (94.89%), Query Frame = 0
BLAST of CsGy4G020990.1 vs. NCBI nr
Match: XP_023534958.1 (uncharacterized protein LOC111796532 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 237.3 bits (604), Expect = 3.8e-59 Identity = 123/169 (72.78%), Postives = 137/169 (81.07%), Query Frame = 0
BLAST of CsGy4G020990.1 vs. NCBI nr
Match: XP_022976856.1 (uncharacterized protein LOC111477103 isoform X1 [Cucurbita maxima]) HSP 1 Score: 214.5 bits (545), Expect = 2.6e-52 Identity = 117/171 (68.42%), Postives = 124/171 (72.51%), Query Frame = 0
BLAST of CsGy4G020990.1 vs. TAIR10
Match: AT3G14760.1 (unknown protein) HSP 1 Score: 78.2 bits (191), Expect = 5.3e-15 Identity = 57/142 (40.14%), Postives = 74/142 (52.11%), Query Frame = 0
BLAST of CsGy4G020990.1 vs. TAIR10
Match: AT1G49000.1 (unknown protein) HSP 1 Score: 48.1 bits (113), Expect = 5.9e-06 Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 0
BLAST of CsGy4G020990.1 vs. TAIR10
Match: AT3G18560.1 (unknown protein) HSP 1 Score: 45.1 bits (105), Expect = 5.0e-05 Identity = 30/67 (44.78%), Postives = 38/67 (56.72%), Query Frame = 0
BLAST of CsGy4G020990.1 vs. TrEMBL
Match: tr|A0A0A0L376|A0A0A0L376_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G622860 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 2.9e-71 Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 0
BLAST of CsGy4G020990.1 vs. TrEMBL
Match: tr|A0A1S3CQQ9|A0A1S3CQQ9_CUCME (uncharacterized protein LOC103503252 OS=Cucumis melo OX=3656 GN=LOC103503252 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 3.7e-63 Identity = 127/137 (92.70%), Postives = 130/137 (94.89%), Query Frame = 0
BLAST of CsGy4G020990.1 vs. TrEMBL
Match: tr|A0A2I4E168|A0A2I4E168_9ROSI (uncharacterized protein LOC108985336 OS=Juglans regia OX=51240 GN=LOC108985336 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 8.4e-23 Identity = 76/167 (45.51%), Postives = 90/167 (53.89%), Query Frame = 0
BLAST of CsGy4G020990.1 vs. TrEMBL
Match: tr|A0A1Q3AYF4|A0A1Q3AYF4_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_04204 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 4.2e-22 Identity = 74/178 (41.57%), Postives = 94/178 (52.81%), Query Frame = 0
BLAST of CsGy4G020990.1 vs. TrEMBL
Match: tr|A0A2P5Y697|A0A2P5Y697_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA09530 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 5.5e-22 Identity = 67/173 (38.73%), Postives = 96/173 (55.49%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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