CsGy4G020980.1 (mRNA) Cucumber (Gy14) v2

NameCsGy4G020980.1
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr4 : 27685381 .. 27687702 (-)
Sequence length2174
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACATTGTGTATTTACATCATGATAATGAGGTAAGATTTCAATTTCCATCTACTTTATCATCTATCCTTGTTAGCTACCGAACTTAACGATCTAGTTTTTTGGATTCCTATTATCCTTAGGACATGGTGTGGAAAATAGGAAAATAGCCAATCTGAAAATGTTTTTCATATACCGCAGGAACAACAGATTTCCAAGGGTTTGATAATTGGTTCTTCCACAGCATTGGTGTGCAGTTCGTTGTTAGCCAACGAGCCGTTCTCGGGCTACATTGTGTTTTGCTGTAAAATTACCCTCTCCATTAATTTCTCCATTTTGATTGATTGGTTTGTTTTTTCAACCCACCAATCAGTTAAATGGTGTATTTTTAGACAACCAACCCGAAATTCTCAAGAGTGAAGAATGTTGTAATATTTTTTAGCCTTGTGATTTAAAAGCTTTGTTCCAATGCTCTGCTGCTCCACTCTCTCTCGCTCTCTCTCTCTCTCTGATTTTGCTACGAACTGTTTGGATTTGAAGAATCTTGTATCAAATAAGAACCTAAAGAAAGGACAACGAATGAAGTTTAACCATCCCCAGTAGGTTCTTCTTCCAATTTTACTCATTGATTTGGGATAGAGCTTGGATTTAAACCTGGCTAAGTTCGGCTATATGTCGATAGATACATCTTGCACTTGTTTCGAACTTATTCAGCTGCTACTTTTGTTCCATTTTACATCATACTTGATAATTGTCTAAAGATCACAAAAGAAAATGAAAGCAAGAGAAGTGGATAATGTGTAAAAAGAGAAAAGAAAGAAAAGTTATTAGGAGATAATCTATCAAAAAGAAGAAAGGAATATTACATTGGAAAAGCTCACCCCTTTGTATAATTTATACACCTCTTTTCTTAAAATTCCCATCATAGAGAAAGAGCATCAAAGTAGATCCTTCAACCTTGTCTTTACTTTTATGACTTCTCCTTCCTACATGTAATCAATCAAACAACACATGCGATGTTAAAAGACAGGAGAAAAAGTACAAACACCAAATGACATATACTCATTTTCTTTCTTGAGTCAAAACACTCATATCTCTCTTACCTCCTAATTAGTTGATTAATTTTATTTTTTGTGATAATAGATATACTTTAAAAGAACAATACATAATTTATCAACAAAAGAAAAAAACTCAATTAAATACTAGAAAATCTTATCTCTTTATATATTTAAATGTGTTATAGTACATTTGAATAATGATAGTAGGTCATGATTACTTTGTTTGGAAGCTATTATCACTAAATAACAATTTTAGTTTAGGCTAACTTGTCCATTAATTTACTTAAAGGAGAAAAAAAATAAAAACTTGTCCATTAATTAACCATTGGAAATCCTTTGTTGAAATTCCAACTCTGACGTTTAAACAATAATAATCACATTCACTGATTTTTCTAACATATTTTTTCTTTGGATTTGTTACTAAAAGAATTGTGAGTATGAGAGATCGAACATCTCTTCAAAATGTATAGCCTTTGAAAGAGTTAGTAATTGTCACTTTCCTTAATAAGATTTGAAAAAGTTATCGAAAAGTTTAGAATTGTTAAAAAAAATCTTAAAAAGGTTTGTGTGTTCAAATCTCCCAAATAACTTACGGAGCAGCACCTTGTAACCATTTTCCATGGCGGCAATTTGTTCCTGCAGCAATCTTCCCCTTTCGTCATACAGAATAAGCCCACTGTACTTCAGCATCTCACACTTTTCCCCCATTAATATCGGCCGTTGCCACACCGCTGCCGTCGAATTCCGGCTTCCCAATTCTTCCCCTTCCTCTTCTCTGCCCAAAAGCCGCACCGGTGTCTCTCCGCCGCCGCTCCCCTTCCGCCTACTTTCCGCTGCCGGCCATTTCCACCACCTCTGATCTGTCCGTCGTGGGTGGGCTTTCTTCTCCCCCTTTCTCTTCTTGGCCCACGCGGCCGCACAGAGCCCAATGACGGCGGCCACCGTGCACGTTAAGAGAACGAAGGCTTGTTGGGTTGAGAGCTTCCATTTGTCTTCCAAATTCCACAGAGCTTCCATGGGTTCCAATGCATGATTGGAAGAAGGGTGATGAAGTCGGAGCTATATATTGTCTTTGTCATTATTAGTATTAGTAATCATAATAATATTTGCGTTTTAAATCCAATGTTGCCGTTGTTGTTATTTCAATTTTTGAATACGAGAGCCAATAATTGTTAGGATTATTAATACGTGCCACCTCAATCTTTACATTTTGTTCCATCACAAATTAATCACCCCATAAATACTTCTTGCTTTTATATACAAAATTTCCAACTTTATTCTTAT

mRNA sequence

ATGTACATTGTGTATTTACATCATGATAATGAGGAACAACAGATTTCCAAGGGTTTGATAATTGGTTCTTCCACAGCATTGGTGTGCAGTTCGTTGTTAGCCAACGAGCCGTTCTCGGGCTACATTGTGTTTTGCTGTAAAATTACCCTCTCCATTAATTTCTCCATTTTGATTGATTGGTTTGTTTTTTCAACCCACCAATCAGTTAAATGGTGTATTTTTAGACAACCAACCCGAAATTCTCAAGAGTGAAGAATGTTGTAATATTTTTTAGCCTTGTGATTTAAAAGCTTTGTTCCAATGCTCTGCTGCTCCACTCTCTCTCGCTCTCTCTCTCTCTCTGATTTTGCTACGAACTGTTTGGATTTGAAGAATCTTGTATCAAATAAGAACCTAAAGAAAGGACAACGAATGAAGTTTAACCATCCCCAGTAGGTTCTTCTTCCAATTTTACTCATTGATTTGGGATAGAGCTTGGATTTAAACCTGGCTAAGTTCGGCTATATGTCGATAGATACATCTTGCACTTGTTTCGAACTTATTCAGCTGCTACTTTTGTTCCATTTTACATCATACTTGATAATTGTCTAAAGATCACAAAAGAAAATGAAAGCAAGAGAAGTGGATAATGTGTAAAAAGAGAAAAGAAAGAAAAGTTATTAGGAGATAATCTATCAAAAAGAAGAAAGGAATATTACATTGGAAAAGCTCACCCCTTTGTATAATTTATACACCTCTTTTCTTAAAATTCCCATCATAGAGAAAGAGCATCAAAGTAGATCCTTCAACCTTGTCTTTACTTTTATGACTTCTCCTTCCTACATGTAATCAATCAAACAACACATGCGATGTTAAAAGACAGGAGAAAAAGTACAAACACCAAATGACATATACTCATTTTCTTTCTTGAGTCAAAACACTCATATCTCTCTTACCTCCTAATTAGTTGATTAATTTTATTTTTTGTGATAATAGATATACTTTAAAAGAACAATACATAATTTATCAACAAAAGAAAAAAACTCAATTAAATACTAGAAAATCTTATCTCTTTATATATTTAAATGTGTTATAGTACATTTGAATAATGATAGTAGGTCATGATTACTTTGTTTGGAAGCTATTATCACTAAATAACAATTTTAGTTTAGGCTAACTTGTCCATTAATTTACTTAAAGGAGAAAAAAAATAAAAACTTGTCCATTAATTAACCATTGGAAATCCTTTGTTGAAATTCCAACTCTGACGTTTAAACAATAATAATCACATTCACTGATTTTTCTAACATATTTTTTCTTTGGATTTGTTACTAAAAGAATTGTGAGTATGAGAGATCGAACATCTCTTCAAAATGTATAGCCTTTGAAAGAGTTAGTAATTGTCACTTTCCTTAATAAGATTTGAAAAAGTTATCGAAAAGTTTAGAATTGTTAAAAAAAATCTTAAAAAGGTTTGTGTGTTCAAATCTCCCAAATAACTTACGGAGCAGCACCTTGTAACCATTTTCCATGGCGGCAATTTGTTCCTGCAGCAATCTTCCCCTTTCGTCATACAGAATAAGCCCACTGTACTTCAGCATCTCACACTTTTCCCCCATTAATATCGGCCGTTGCCACACCGCTGCCGTCGAATTCCGGCTTCCCAATTCTTCCCCTTCCTCTTCTCTGCCCAAAAGCCGCACCGGTGTCTCTCCGCCGCCGCTCCCCTTCCGCCTACTTTCCGCTGCCGGCCATTTCCACCACCTCTGATCTGTCCGTCGTGGGTGGGCTTTCTTCTCCCCCTTTCTCTTCTTGGCCCACGCGGCCGCACAGAGCCCAATGACGGCGGCCACCGTGCACGTTAAGAGAACGAAGGCTTGTTGGGTTGAGAGCTTCCATTTGTCTTCCAAATTCCACAGAGCTTCCATGGGTTCCAATGCATGATTGGAAGAAGGGTGATGAAGTCGGAGCTATATATTGTCTTTGTCATTATTAGTATTAGTAATCATAATAATATTTGCGTTTTAAATCCAATGTTGCCGTTGTTGTTATTTCAATTTTTGAATACGAGAGCCAATAATTGTTAGGATTATTAATACGTGCCACCTCAATCTTTACATTTTGTTCCATCACAAATTAATCACCCCATAAATACTTCTTGCTTTTATATACAAAATTTCCAACTTTATTCTTAT

Coding sequence (CDS)

ATGTACATTGTGTATTTACATCATGATAATGAGGAACAACAGATTTCCAAGGGTTTGATAATTGGTTCTTCCACAGCATTGGTGTGCAGTTCGTTGTTAGCCAACGAGCCGTTCTCGGGCTACATTGTGTTTTGCTGTAAAATTACCCTCTCCATTAATTTCTCCATTTTGATTGATTGGTTTGTTTTTTCAACCCACCAATCAGTTAAATGGTGTATTTTTAGACAACCAACCCGAAATTCTCAAGAGTGA

Protein sequence

MYIVYLHHDNEEQQISKGLIIGSSTALVCSSLLANEPFSGYIVFCCKITLSINFSILIDWFVFSTHQSVKWCIFRQPTRNSQE
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CsGy4G020980CsGy4G020980gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy4G020980.1.CDS.2CsGy4G020980.1.CDS.2CDS
CsGy4G020980.1.CDS.1CsGy4G020980.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy4G020980.1.exon.2CsGy4G020980.1.exon.2exon
CsGy4G020980.1.exon.1CsGy4G020980.1.exon.1exon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CsGy4G020980.1.three_prime_UTR.1CsGy4G020980.1.three_prime_UTR.1three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CsGy4G020980.1CsGy4G020980.1-proteinpolypeptide