CsGy4G016450.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGGTTACCCAAATCAACCATCAGGTTACCCAAATCAACCATCAGGTTACGGTTACGGCTACGGCGGCACCGGTGGCTACGGAGCTCCACCACCGACTGCTCAGCCTTACAATTCTTCAGCTTACGGACATCCACAGTCCCAGACTCAGCAGCCGTACGCTCCGGTGGCCGCGCCATATGGCGTACCGTCCGCACCGTACGGGTCAGCTCAGGGCGAAAAACCGCCCAAGGACAAGCCTAATCAGTCGTACGGCGGTGCCGGTGGTGGTCATCAGTCTTACGGCGGAGCAGCCAGTGGTGGTCATGGTTATCCACCTCCTTCTGCTTATGGAAGCCCTTTTGCTTCACTCTTGCCATCGGCTTTTCCGCCTGGTACTGATCCGAGCATCGTTGCTTGTTTTCAAGTAGCCGATCAGGATGGTAGTGGGTTTATTGATGATAAGGAGTTGCAAGGTGTTCTATCATCGTATAATCAGAAGTTTAGCATCAGAACTGTTCATCTTCTTATGTACCATTTCACCAATACGAATACCAGGAAGATCGGTAATCTCACTTTTCCTTCTATTGACTTCTTGTTTTCTCTGGAAATAAGACATTTCTTGTTGTTTTCTTTAAGTTTCTGAAATCAACAACAGTAATGATGGTAAAAAAAAGAGAGAATCTGTAGGAATCTGGAGGGCCCAGATAGAACAAAAAGACAAACAGTTAGGTTAATGGGGGCAGGAGCGGTCATAATCGGGGCATCTTCTATTCTTAGTTTCAACTGATTTTAGTCGAAAAATGAAATAGAAGCTTTCAGAGATGTTTGATTATAACTTGAACGGATTGGAACAGGGCCTTTCGTTGTCAATTGTCAAAACTTTTAATAGAATTTCCATATAACTGCATAGAATAGTACGATTTTAATCTTCGATTCAAGAGATGAGTACATATAAATTCCAGTTGAAGCTATGCTAATTTGACATATAATTGCCGAGAACTGCAATTTGCCTTACTAGTGATTATAATTATCTCTTGTTACTGTTAACTGATTAGTTCACGATGCTCACAAATCATACCTGTGACTATGAGGTTTTCATATTCTCATTTATTTGTATTGAACTTACTAGAAGATACCATCACATTCTTACCATATACTTTCTATATTTTTTTTCTTTTTAATTTTATCTGTACAAAGATTACCTCCGTGTTATTGCCTGGGATTAGTTGGTGAAGTTAATTTCTGTTTTATTTTGAATTTGTCTGGTAAAATTGCGTACCTGCTAATTGGATATATTAGTCGGCCACGGTTGCACAAACTTCACTATTTTCAAACTAGTGGTTAAAAACTAAAGTTATTGACTTTTCAAAACTCAGAAGCTTTTGGGTTATTACAGTGTCGTCATTATGTAAGTGTTTTTTGAAATGATATGACGTTTTATGCTTCAAATTAGAGCTAAAGTTAAATTGTTGATTCTTCATTCTGTTCAAGCCATATTATTATGATTAATTTTTTATGCATTTGGCCTTGAGCAACTTCAATTTGGAAATTATGCTTAATACCTTTTCTTTTGACGTTGTCTTTTGCATTTTATTTCTGAAAAACAGGACCTAAGGAGTTCATTTCTCTGTTTTATGGACTTCAGAGCTGGAGGGTTGGTTGAAGACTTATTATTATTTTAGCCAACATTCTTATTTGGTGTAATTTGTTTAAACTGAATATTTGTTGAATCTTTTTCAGGGTATTTTTGAGAGGTTTGATTCAGACAGAAGTGGAAAAATTGATTCCAATGAGTTGCGAGAAGCACTTTTGAGTTTGGGCTTTGCAGTCTCACCAATGGTCTTGGACTTGCTGGTGTCTAAGTTTGACAAAAGTGGTGGGAAAAGCAAGGCCATTGAATACGATAATTTTATCGAGTACGTTTGTCTTTTTTACCCTTGATTTATGGTGCTACTCTTTTTACAATGAGAGGTTTTGAGTTATGCTTTAAATGTTAAGCTTTCACTTGTCATTAATCACTGTTCTTATTCTATTCTTTTCTTTTTGCCAATGCAGGTGTTGTCTTACTGTCAAAGTGAGTTTCTGACTATTTTTGTTTGCATGTCTTTGTATATTAAAACATGAACTGTTTAAAGGCAATGACATCTTCTTTGAAGAAATGCTTATTCTGCAATCTGTACTTTTTGTCATGCTCAAAATCACTTCGAAATACACTTTGGTAACTTAAAATTAGTTAAATATTTAATTTTACACTTGTACAAGCAATTTTCATTTCATCAATATTGGTTTTGAATCATTAAAAGCATGTTTCATTATGATTTTAAATTAAAAACAACAAAAAATTATTTTAAAAGTTTTAGAATCACTCCTAAACATGCATAGTTGGACACATTTTCCTCGTTGTCTTCATTCTGTTCCACTCATGTTGATGCCTATGAGTTTAACTGTGGCTGCCAAGTAGTTACTTAAAATCCAATTTTGCCATGAGATATTGCTGTTGTTATTTTCATTTTTTTCTCCCTTCTATTTTTCACACACTGATAGTTTAAGCTCCTTGTATGACCCTTTAACTCAGTTCTCCAGCAACAAAAACGTTTTGATTTTTAAGAATTCCTGAAACATTTTGTTTGCGTTGGGGAGAAAGAGTAGACTAAAACTGAAGTGATTTTGATGTAATATTTTACAGGGATTGACTGAAAAATTCAAGGAAAAGGACACTACATACTCTGGTTCTGCAACCTTCAGTTATGAGGCTTTCATGTTGACTGTCTTACCATTTCTCATTGCCTGAGGAGTAAGCCTTCGTTCGAGCACGTTTGTTCAGTGTAAAGCTTGAGTTTTCTTTGGCTTTTTCTTTTGATTTCCATTATGTTTGATAGAATCTATTAATGTAGCCTCATCCTTATCAATGTTATAAGTTATGTTCTTTGTATAAATTGGCTATCTTAAGTATTCAATGATAGTTCTATGAATATCTCAACTGTTTACCTGTTTCCCCGCCTGGATTTCCAATTTGGCATTTGACAGTAAAAGTTAGGTCGTTGAATCATATATATAATGTTATCCTCTTCTGCTTTTTATGATAAATATTGTGGATGAAGTTTGGACTGTTCAATTGCAAGATATTCTGGGTTGATTTCTTTTTTTCTTTTTTCTTTT ATGTCAGGTTACCCAAATCAACCATCAGGTTACCCAAATCAACCATCAGGTTACGGTTACGGCTACGGCGGCACCGGTGGCTACGGAGCTCCACCACCGACTGCTCAGCCTTACAATTCTTCAGCTTACGGACATCCACAGTCCCAGACTCAGCAGCCGTACGCTCCGGTGGCCGCGCCATATGGCGTACCGTCCGCACCGTACGGGTCAGCTCAGGGCGAAAAACCGCCCAAGGACAAGCCTAATCAGTCGTACGGCGGTGCCGGTGGTGGTCATCAGTCTTACGGCGGAGCAGCCAGTGGTGGTCATGGTTATCCACCTCCTTCTGCTTATGGAAGCCCTTTTGCTTCACTCTTGCCATCGGCTTTTCCGCCTGGTACTGATCCGAGCATCGTTGCTTGTTTTCAAGTAGCCGATCAGGATGGTAGTGGGTTTATTGATGATAAGGAGTTGCAAGGTGTTCTATCATCGTATAATCAGAAGTTTAGCATCAGAACTGTTCATCTTCTTATGTACCATTTCACCAATACGAATACCAGGAAGATCGGACCTAAGGAGTTCATTTCTCTGTTTTATGGACTTCAGAGCTGGAGGGGTATTTTTGAGAGGTTTGATTCAGACAGAAGTGGAAAAATTGATTCCAATGAGTTGCGAGAAGCACTTTTGAGTTTGGGCTTTGCAGTCTCACCAATGGTCTTGGACTTGCTGGTGTCTAAGTTTGACAAAAGTGGTGGGAAAAGCAAGGCCATTGAATACGATAATTTTATCGAGTGTTGTCTTACTGTCAAAGGATTGACTGAAAAATTCAAGGAAAAGGACACTACATACTCTGGTTCTGCAACCTTCAGTTATGAGGCTTTCATGTTGACTGTCTTACCATTTCTCATTGCCTGAGGAGTAAGCCTTCGTTCGAGCACGTTTGTTCAGTGTAAAGCTTGAGTTTTCTTTGGCTTTTTCTTTTGATTTCCATTATGTTTGATAGAATCTATTAATGTAGCCTCATCCTTATCAATGTTATAAGTTATGTTCTTTGTATAAATTGGCTATCTTAAGTATTCAATGATAGTTCTATGAATATCTCAACTGTTTACCTGTTTCCCCGCCTGGATTTCCAATTTGGCATTTGACAGTAAAAGTTAGGTCGTTGAATCATATATATAATGTTATCCTCTTCTGCTTTTTATGATAAATATTGTGGATGAAGTTTGGACTGTTCAATTGCAAGATATTCTGGGTTGATTTCTTTTTTTCTTTTTTCTTTT ATGTCAGGTTACCCAAATCAACCATCAGGTTACCCAAATCAACCATCAGGTTACGGTTACGGCTACGGCGGCACCGGTGGCTACGGAGCTCCACCACCGACTGCTCAGCCTTACAATTCTTCAGCTTACGGACATCCACAGTCCCAGACTCAGCAGCCGTACGCTCCGGTGGCCGCGCCATATGGCGTACCGTCCGCACCGTACGGGTCAGCTCAGGGCGAAAAACCGCCCAAGGACAAGCCTAATCAGTCGTACGGCGGTGCCGGTGGTGGTCATCAGTCTTACGGCGGAGCAGCCAGTGGTGGTCATGGTTATCCACCTCCTTCTGCTTATGGAAGCCCTTTTGCTTCACTCTTGCCATCGGCTTTTCCGCCTGGTACTGATCCGAGCATCGTTGCTTGTTTTCAAGTAGCCGATCAGGATGGTAGTGGGTTTATTGATGATAAGGAGTTGCAAGGTGTTCTATCATCGTATAATCAGAAGTTTAGCATCAGAACTGTTCATCTTCTTATGTACCATTTCACCAATACGAATACCAGGAAGATCGGACCTAAGGAGTTCATTTCTCTGTTTTATGGACTTCAGAGCTGGAGGGGTATTTTTGAGAGGTTTGATTCAGACAGAAGTGGAAAAATTGATTCCAATGAGTTGCGAGAAGCACTTTTGAGTTTGGGCTTTGCAGTCTCACCAATGGTCTTGGACTTGCTGGTGTCTAAGTTTGACAAAAGTGGTGGGAAAAGCAAGGCCATTGAATACGATAATTTTATCGAGTGTTGTCTTACTGTCAAAGGATTGACTGAAAAATTCAAGGAAAAGGACACTACATACTCTGGTTCTGCAACCTTCAGTTATGAGGCTTTCATGTTGACTGTCTTACCATTTCTCATTGCCTGA MSGYPNQPSGYPNQPSGYGYGYGGTGGYGAPPPTAQPYNSSAYGHPQSQTQQPYAPVAAPYGVPSAPYGSAQGEKPPKDKPNQSYGGAGGGHQSYGGAASGGHGYPPPSAYGSPFASLLPSAFPPGTDPSIVACFQVADQDGSGFIDDKELQGVLSSYNQKFSIRTVHLLMYHFTNTNTRKIGPKEFISLFYGLQSWRGIFERFDSDRSGKIDSNELREALLSLGFAVSPMVLDLLVSKFDKSGGKSKAIEYDNFIECCLTVKGLTEKFKEKDTTYSGSATFSYEAFMLTVLPFLIA
BLAST of CsGy4G016450.1 vs. NCBI nr
Match: XP_004142653.1 (PREDICTED: probable calcium-binding protein CML49 [Cucumis sativus] >KGN54506.1 Ef-hand calcium binding protein [Cucumis sativus]) HSP 1 Score: 450.3 bits (1157), Expect = 5.1e-123 Identity = 280/297 (94.28%), Postives = 280/297 (94.28%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. NCBI nr
Match: XP_008464601.1 (PREDICTED: probable calcium-binding protein CML49 [Cucumis melo]) HSP 1 Score: 418.3 bits (1074), Expect = 2.2e-113 Identity = 271/297 (91.25%), Postives = 273/297 (91.92%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. NCBI nr
Match: XP_022966416.1 (probable calcium-binding protein CML49 [Cucurbita maxima]) HSP 1 Score: 398.7 bits (1023), Expect = 1.8e-107 Identity = 249/299 (83.28%), Postives = 251/299 (83.95%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. NCBI nr
Match: XP_023518609.1 (probable calcium-binding protein CML49 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 397.5 bits (1020), Expect = 4.0e-107 Identity = 248/299 (82.94%), Postives = 251/299 (83.95%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. NCBI nr
Match: XP_022153892.1 (probable calcium-binding protein CML49 isoform X1 [Momordica charantia] >XP_022153893.1 probable calcium-binding protein CML49 isoform X1 [Momordica charantia] >XP_022153894.1 probable calcium-binding protein CML49 isoform X1 [Momordica charantia] >XP_022153895.1 probable calcium-binding protein CML49 isoform X1 [Momordica charantia]) HSP 1 Score: 397.1 bits (1019), Expect = 5.2e-107 Identity = 260/299 (86.96%), Postives = 266/299 (88.96%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. TAIR10
Match: AT5G04170.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 324.3 bits (830), Expect = 7.7e-89 Identity = 157/187 (83.96%), Postives = 172/187 (91.98%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. TAIR10
Match: AT3G10300.3 (Calcium-binding EF-hand family protein) HSP 1 Score: 302.4 bits (773), Expect = 3.1e-82 Identity = 144/175 (82.29%), Postives = 161/175 (92.00%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. TAIR10
Match: AT2G27480.1 (Calcium-binding EF-hand family protein) HSP 1 Score: 152.9 bits (385), Expect = 3.1e-37 Identity = 80/176 (45.45%), Postives = 115/176 (65.34%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. TAIR10
Match: AT1G74740.1 (calcium-dependent protein kinase 30) HSP 1 Score: 46.2 bits (108), Expect = 4.1e-05 Identity = 39/129 (30.23%), Postives = 56/129 (43.41%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. Swiss-Prot
Match: sp|Q9FYE4|CML50_ARATH (Probable calcium-binding protein CML50 OS=Arabidopsis thaliana OX=3702 GN=CML50 PE=2 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.4e-87 Identity = 157/187 (83.96%), Postives = 172/187 (91.98%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. Swiss-Prot
Match: sp|Q8W4L0|CML49_ARATH (Probable calcium-binding protein CML49 OS=Arabidopsis thaliana OX=3702 GN=CML49 PE=2 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 5.7e-81 Identity = 144/175 (82.29%), Postives = 161/175 (92.00%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. Swiss-Prot
Match: sp|Q9ZQH1|CML48_ARATH (Probable calcium-binding protein CML48 OS=Arabidopsis thaliana OX=3702 GN=CML48 PE=2 SV=2) HSP 1 Score: 152.9 bits (385), Expect = 5.5e-36 Identity = 80/176 (45.45%), Postives = 115/176 (65.34%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. Swiss-Prot
Match: sp|Q6DC93|PEF1_DANRE (Peflin OS=Danio rerio OX=7955 GN=pef1 PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 4.0e-26 Identity = 60/174 (34.48%), Postives = 103/174 (59.20%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. Swiss-Prot
Match: sp|Q5PQ53|PEF1_XENLA (Peflin OS=Xenopus laevis OX=8355 GN=pef1 PE=1 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 6.8e-26 Identity = 60/166 (36.14%), Postives = 99/166 (59.64%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. TrEMBL
Match: tr|A0A0A0L336|A0A0A0L336_CUCSA (Ef-hand calcium binding protein OS=Cucumis sativus OX=3659 GN=Csa_4G341560 PE=4 SV=1) HSP 1 Score: 450.3 bits (1157), Expect = 3.4e-123 Identity = 280/297 (94.28%), Postives = 280/297 (94.28%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. TrEMBL
Match: tr|A0A1S3CNE3|A0A1S3CNE3_CUCME (probable calcium-binding protein CML49 OS=Cucumis melo OX=3656 GN=LOC103502445 PE=4 SV=1) HSP 1 Score: 418.3 bits (1074), Expect = 1.4e-113 Identity = 271/297 (91.25%), Postives = 273/297 (91.92%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. TrEMBL
Match: tr|B9T7A1|B9T7A1_RICCO (Ef-hand calcium binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0057830 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 2.4e-92 Identity = 178/223 (79.82%), Postives = 190/223 (85.20%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. TrEMBL
Match: tr|A0A0L9TUQ7|A0A0L9TUQ7_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g037600 PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 3.4e-91 Identity = 166/187 (88.77%), Postives = 178/187 (95.19%), Query Frame = 0
BLAST of CsGy4G016450.1 vs. TrEMBL
Match: tr|A0A0S3SU31|A0A0S3SU31_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G325300 PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 3.4e-91 Identity = 166/187 (88.77%), Postives = 178/187 (95.19%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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