CsGy4G011700.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGTTCAGTTGAAAAACAAGAGCATAGAGATGTTGCATTTAAATTAGTTGGGAAATGCATCAAGAAGAGATCTGGTAAACGCAGCTTTGTTGGTGTCAGGCAAAGACCTTCTGGGAAATGGGTAGCAGAGATCAAAGACGCAACTCATGATATCAGAATGTGGTTGGGAACCTTCAACACACCGGAGGAAGCTGCCAGAGCTTACGACGAAGCTGCCTGCCTCCTACGTGGCTCGAATGCTAGAACCAACTTCACTCTCGCTTCCAACTCCTCCTCTGCCCTCTCTTTCAAAATCAGAAACCTTCTCATTCATAAGATCACTTTGAAACGAAGTTCAATCACTGAAACTCATGCTCATGTTGCTCATTCTGAAACAAACCAAGAAATGCACATGTTTGACAATAATGCAGTCTGGAGCAGCTGCAATGGAGAAATTGAGGTGGGTTTTTGTCACTTCACCCATTCATGCTGCGATCTTCCTCTTGGGTTCAATTTTGATATGGATGAGTCTTTGTCTGCACTGAATGGAATCACTCAACATTTAGGAAATGCATATGATGATGCCTTTGACACACCTGCTGCTCACATTGATTATACCGATTTCTCTTCATTTTTCTTTGTACCAACCTGA ATGGAGAGTTCAGTTGAAAAACAAGAGCATAGAGATGTTGCATTTAAATTAGTTGGGAAATGCATCAAGAAGAGATCTGGTAAACGCAGCTTTGTTGGTGTCAGGCAAAGACCTTCTGGGAAATGGGTAGCAGAGATCAAAGACGCAACTCATGATATCAGAATGTGGTTGGGAACCTTCAACACACCGGAGGAAGCTGCCAGAGCTTACGACGAAGCTGCCTGCCTCCTACGTGGCTCGAATGCTAGAACCAACTTCACTCTCGCTTCCAACTCCTCCTCTGCCCTCTCTTTCAAAATCAGAAACCTTCTCATTCATAAGATCACTTTGAAACGAAGTTCAATCACTGAAACTCATGCTCATGTTGCTCATTCTGAAACAAACCAAGAAATGCACATGTTTGACAATAATGCAGTCTGGAGCAGCTGCAATGGAGAAATTGAGGTGGGTTTTTGTCACTTCACCCATTCATGCTGCGATCTTCCTCTTGGGTTCAATTTTGATATGGATGAGTCTTTGTCTGCACTGAATGGAATCACTCAACATTTAGGAAATGCATATGATGATGCCTTTGACACACCTGCTGCTCACATTGATTATACCGATTTCTCTTCATTTTTCTTTGTACCAACCTGA ATGGAGAGTTCAGTTGAAAAACAAGAGCATAGAGATGTTGCATTTAAATTAGTTGGGAAATGCATCAAGAAGAGATCTGGTAAACGCAGCTTTGTTGGTGTCAGGCAAAGACCTTCTGGGAAATGGGTAGCAGAGATCAAAGACGCAACTCATGATATCAGAATGTGGTTGGGAACCTTCAACACACCGGAGGAAGCTGCCAGAGCTTACGACGAAGCTGCCTGCCTCCTACGTGGCTCGAATGCTAGAACCAACTTCACTCTCGCTTCCAACTCCTCCTCTGCCCTCTCTTTCAAAATCAGAAACCTTCTCATTCATAAGATCACTTTGAAACGAAGTTCAATCACTGAAACTCATGCTCATGTTGCTCATTCTGAAACAAACCAAGAAATGCACATGTTTGACAATAATGCAGTCTGGAGCAGCTGCAATGGAGAAATTGAGGTGGGTTTTTGTCACTTCACCCATTCATGCTGCGATCTTCCTCTTGGGTTCAATTTTGATATGGATGAGTCTTTGTCTGCACTGAATGGAATCACTCAACATTTAGGAAATGCATATGATGATGCCTTTGACACACCTGCTGCTCACATTGATTATACCGATTTCTCTTCATTTTTCTTTGTACCAACCTGA MESSVEKQEHRDVAFKLVGKCIKKRSGKRSFVGVRQRPSGKWVAEIKDATHDIRMWLGTFNTPEEAARAYDEAACLLRGSNARTNFTLASNSSSALSFKIRNLLIHKITLKRSSITETHAHVAHSETNQEMHMFDNNAVWSSCNGEIEVGFCHFTHSCCDLPLGFNFDMDESLSALNGITQHLGNAYDDAFDTPAAHIDYTDFSSFFFVPT
BLAST of CsGy4G011700.1 vs. NCBI nr
Match: XP_004149659.1 (PREDICTED: ethylene-responsive transcription factor ERF087 [Cucumis sativus] >KGN54026.1 hypothetical protein Csa_4G268100 [Cucumis sativus]) HSP 1 Score: 431.0 bits (1107), Expect = 2.3e-117 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. NCBI nr
Match: XP_008449953.1 (PREDICTED: ethylene-responsive transcription factor RAP2-11 [Cucumis melo]) HSP 1 Score: 398.7 bits (1023), Expect = 1.3e-107 Identity = 195/211 (92.42%), Postives = 200/211 (94.79%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. NCBI nr
Match: XP_022985763.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima] >XP_022985764.1 ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima] >XP_022985765.1 ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima] >XP_022985767.1 ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima]) HSP 1 Score: 197.6 bits (501), Expect = 4.3e-47 Identity = 126/239 (52.72%), Postives = 152/239 (63.60%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. NCBI nr
Match: XP_023512705.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo] >XP_023512706.1 ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 197.6 bits (501), Expect = 4.3e-47 Identity = 128/241 (53.11%), Postives = 150/241 (62.24%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. NCBI nr
Match: XP_022944296.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita moschata] >XP_022944297.1 ethylene-responsive transcription factor RAP2-11-like [Cucurbita moschata] >XP_022944298.1 ethylene-responsive transcription factor RAP2-11-like [Cucurbita moschata]) HSP 1 Score: 194.1 bits (492), Expect = 4.7e-46 Identity = 126/239 (52.72%), Postives = 150/239 (62.76%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. TAIR10
Match: AT5G19790.1 (related to AP2 11) HSP 1 Score: 120.9 bits (302), Expect = 9.2e-28 Identity = 62/85 (72.94%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. TAIR10
Match: AT4G23750.1 (cytokinin response factor 2) HSP 1 Score: 81.6 bits (200), Expect = 6.2e-16 Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. TAIR10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 79.7 bits (195), Expect = 2.4e-15 Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. TAIR10
Match: AT3G14230.1 (related to AP2 2) HSP 1 Score: 79.7 bits (195), Expect = 2.4e-15 Identity = 39/70 (55.71%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. TAIR10
Match: AT1G53910.1 (related to AP2 12) HSP 1 Score: 79.3 bits (194), Expect = 3.1e-15 Identity = 37/62 (59.68%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. Swiss-Prot
Match: sp|Q6J9S1|RA211_ARATH (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702 GN=RAP2-11 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.7e-26 Identity = 62/85 (72.94%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. Swiss-Prot
Match: sp|A0A1X9PY88|ERN1_LOTJA (Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN1 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 9.1e-25 Identity = 58/84 (69.05%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. Swiss-Prot
Match: sp|A2Q5W1|ERN1_MEDTR (Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=ERN1 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.9e-24 Identity = 56/82 (68.29%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. Swiss-Prot
Match: sp|A9Y0K8|ERN2_MEDTR (Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=ERN2 PE=1 SV=2) HSP 1 Score: 104.0 bits (258), Expect = 2.1e-21 Identity = 58/106 (54.72%), Postives = 73/106 (68.87%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. Swiss-Prot
Match: sp|A9Y0K9|ERN3_MEDTR (Ethylene-responsive transcription factor ERN3 OS=Medicago truncatula OX=3880 GN=ERN3 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.0e-20 Identity = 61/127 (48.03%), Postives = 81/127 (63.78%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. TrEMBL
Match: tr|A0A0A0L1N6|A0A0A0L1N6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268100 PE=4 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 1.5e-117 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. TrEMBL
Match: tr|A0A1S3BN65|A0A1S3BN65_CUCME (ethylene-responsive transcription factor RAP2-11 OS=Cucumis melo OX=3656 GN=LOC103491681 PE=4 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 8.3e-108 Identity = 195/211 (92.42%), Postives = 200/211 (94.79%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. TrEMBL
Match: tr|D7SLK5|D7SLK5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g00490 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.5e-27 Identity = 100/238 (42.02%), Postives = 123/238 (51.68%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. TrEMBL
Match: tr|A0A1R3IET6|A0A1R3IET6_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_12634 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 4.2e-27 Identity = 70/102 (68.63%), Postives = 77/102 (75.49%), Query Frame = 0
BLAST of CsGy4G011700.1 vs. TrEMBL
Match: tr|B9GY71|B9GY71_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G220200v3 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 9.4e-27 Identity = 91/227 (40.09%), Postives = 114/227 (50.22%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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