CsGy3G039510 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACAAATTTCATCAAGAATTCAAATAATTAGAAATGGGCAAGGTTGTGGGTAACTCTGCCAAGATGGTTGTTTTGCTTTTTCTTTTCACTCTCATGCTTTCCATCAATGGTAATTAATTACACCACTATTTATCAACCCTTTCCCCCACTCTTAATTTTCTTATCTCAAACAAAATTTTGGTGACAATAAAATTTTTAAATTATTGTTAAAAACAAACCACATAAGAAAGTACACATAATTAAAAAGAAACTTATCTAATTTGTATACAGCATAATTTTTGTTTTTGTTTTCTTTTTCTCTTTTGTGGCTCACGGTGACCACAGAAAAGGGAGGGGGTGTGGAGGCAATGTTGTGTAAGGAGCGGAGCAAGACGTGGTCGGGATATTGCGCGATCACGAGCCATTGCGACAAACAATGCAAGAATTGGGAAGGTGCAGATCATGGAGCTTGCCACGATCACGTTCCTGGAAAAGCTTGTTATTGCTACTACAACTGTTGAAAACCATGCAATAATTCCTCATGAATTTTGATGATGTTAATCTCCATCTCGACATCATTCCCCTTTTTTTAAAAAAATAAAAACTTTGTGTTTTCTTATGTGTGTGTGAAGGATCTCTATATGAATTAATGTTTTTAAGTGTGAGAAGTCTATGTAGTTAGAAAAATGTGTATTGTGGTTTTTGTGATAAATATGCTGTTATTTATCTTTTTAGCAGCTTGTTTGTGTGTCTGTCTTCCTCTTCATATCAAAATAAAATGGCCTTGCCTGTTGTTTCCCACTAAAACAAGATGGTTTACATCATAAATGTATATGCAC CACAAATTTCATCAAGAATTCAAATAATTAGAAATGGGCAAGGTTGTGGGTAACTCTGCCAAGATGGTTGTTTTGCTTTTTCTTTTCACTCTCATGCTTTCCATCAATGAAAAGGGAGGGGGTGTGGAGGCAATGTTGTGTAAGGAGCGGAGCAAGACGTGGTCGGGATATTGCGCGATCACGAGCCATTGCGACAAACAATGCAAGAATTGGGAAGGTGCAGATCATGGAGCTTGCCACGATCACGTTCCTGGAAAAGCTTGTTATTGCTACTACAACTGTTGAAAACCATGCAATAATTCCTCATGAATTTTGATGATGTTAATCTCCATCTCGACATCATTCCCCTTTTTTTAAAAAAATAAAAACTTTGTGTTTTCTTATGTGTGTGTGAAGGATCTCTATATGAATTAATGTTTTTAAGTGTGAGAAGTCTATGTAGTTAGAAAAATGTGTATTGTGGTTTTTGTGATAAATATGCTGTTATTTATCTTTTTAGCAGCTTGTTTGTGTGTCTGTCTTCCTCTTCATATCAAAATAAAATGGCCTTGCCTGTTGTTTCCCACTAAAACAAGATGGTTTACATCATAAATGTATATGCAC ATGGGCAAGGTTGTGGGTAACTCTGCCAAGATGGTTGTTTTGCTTTTTCTTTTCACTCTCATGCTTTCCATCAATGAAAAGGGAGGGGGTGTGGAGGCAATGTTGTGTAAGGAGCGGAGCAAGACGTGGTCGGGATATTGCGCGATCACGAGCCATTGCGACAAACAATGCAAGAATTGGGAAGGTGCAGATCATGGAGCTTGCCACGATCACGTTCCTGGAAAAGCTTGTTATTGCTACTACAACTGTTGA MGKVVGNSAKMVVLLFLFTLMLSINEKGGGVEAMLCKERSKTWSGYCAITSHCDKQCKNWEGADHGACHDHVPGKACYCYYNC
BLAST of CsGy3G039510 vs. NCBI nr
Match: XP_022139709.1 (defensin-like protein 1 [Momordica charantia]) HSP 1 Score: 116.3 bits (290), Expect = 4.9e-23 Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 0
BLAST of CsGy3G039510 vs. NCBI nr
Match: XP_022976615.1 (defensin-like protein 1 [Cucurbita maxima]) HSP 1 Score: 103.2 bits (256), Expect = 4.3e-19 Identity = 50/84 (59.52%), Postives = 58/84 (69.05%), Query Frame = 0
BLAST of CsGy3G039510 vs. NCBI nr
Match: XP_023535147.1 (defensin-like protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 101.3 bits (251), Expect = 1.6e-18 Identity = 49/84 (58.33%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of CsGy3G039510 vs. NCBI nr
Match: XP_004150110.1 (PREDICTED: defensin-like protein 1 [Cucumis sativus] >KGN59894.1 hypothetical protein Csa_3G851940 [Cucumis sativus]) HSP 1 Score: 99.4 bits (246), Expect = 6.2e-18 Identity = 49/84 (58.33%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of CsGy3G039510 vs. NCBI nr
Match: XP_022935763.1 (defensin-like protein 1 [Cucurbita moschata]) HSP 1 Score: 97.4 bits (241), Expect = 2.4e-17 Identity = 47/84 (55.95%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of CsGy3G039510 vs. TAIR10
Match: AT1G19610.1 (Arabidopsis defensin-like protein) HSP 1 Score: 85.1 bits (209), Expect = 2.2e-17 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of CsGy3G039510 vs. Swiss-Prot
Match: sp|P82787|DEF19_ARATH (Defensin-like protein 19 OS=Arabidopsis thaliana OX=3702 GN=PDF1.4 PE=3 SV=2) HSP 1 Score: 85.1 bits (209), Expect = 4.0e-16 Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of CsGy3G039510 vs. Swiss-Prot
Match: sp|P0C8Y4|DEF1_DAHME (Defensin-like protein 1 OS=Dahlia merckii OX=43367 PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-13 Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 0
BLAST of CsGy3G039510 vs. Swiss-Prot
Match: sp|Q7M1F3|DEF1_AESHI (Defensin-like protein 1 OS=Aesculus hippocastanum OX=43364 PE=1 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.6e-12 Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0
BLAST of CsGy3G039510 vs. Swiss-Prot
Match: sp|Q7M1F2|DEF1_CLITE (Defensin-like protein 1 OS=Clitoria ternatea OX=43366 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.3e-11 Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 0
BLAST of CsGy3G039510 vs. Swiss-Prot
Match: sp|P22357|SF18_HELAN (Anther-specific protein SF18 (Fragment) OS=Helianthus annuus OX=4232 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.8e-11 Identity = 26/53 (49.06%), Postives = 34/53 (64.15%), Query Frame = 0
BLAST of CsGy3G039510 vs. TrEMBL
Match: tr|A0A0A0LFX9|A0A0A0LFX9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851940 PE=3 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 4.1e-18 Identity = 49/84 (58.33%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of CsGy3G039510 vs. TrEMBL
Match: tr|A0A1S3BZX7|A0A1S3BZX7_CUCME (defensin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103495015 PE=3 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 7.8e-17 Identity = 47/84 (55.95%), Postives = 55/84 (65.48%), Query Frame = 0
BLAST of CsGy3G039510 vs. TrEMBL
Match: tr|A0A2P6PYU2|A0A2P6PYU2_ROSCH (Putative defensin, plant OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0301471 PE=3 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 5.0e-16 Identity = 40/83 (48.19%), Postives = 57/83 (68.67%), Query Frame = 0
BLAST of CsGy3G039510 vs. TrEMBL
Match: tr|A0A1R3HZ61|A0A1R3HZ61_9ROSI (Knottin OS=Corchorus olitorius OX=93759 GN=COLO4_25964 PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 8.6e-16 Identity = 42/83 (50.60%), Postives = 57/83 (68.67%), Query Frame = 0
BLAST of CsGy3G039510 vs. TrEMBL
Match: tr|A5AHS9|A5AHS9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_040160 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 3.3e-15 Identity = 37/70 (52.86%), Postives = 49/70 (70.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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