CsGy3G032330 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G032330
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 31676404 .. 31677993 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGGACGTACAACTTGCCATGACAAAATGGTCAATATAAATTCTAAAGTTCACTTATGAGAAAAAAAAATTAACGGATTAAAATCCCAACTCCAACACAAACCTCTCGTCCAATGCCTGTTCGCAAAAACCAAATAATCAATTGAAAGCAAATGAACCACTGAGATAATCTATCTTAACTTGACAGACATTAAAAAAAAAAAAAAGGTTCTGTGGATTGCACAATATAGAAAATATACGAGAAAAGATAATCCAAAGTGTGTCTTTAGCTCACAAAAGATAAATAATGAGTACCCAAAAAAAAAACTCGAGATAAAAACAAACACCAAATCGAAGCAATTTAGTTACGGAAAGCTCTATGCGAGTATGAAACGGAAGAAAACTGGAATGAAACCAATGTGAGCTACACATTTATCAGAATAATGCAAGCCTCCTTGACAATAACAGAATGCAAGAAATTGAGAAATGCAACTGAATTCAAGATAAGTGTACCAGAGAAAAGTGCAGAATATGAAGCATTTGAGTTGGAGTTGGAGTGTGAAATGGAAATGATGGAGGAGTGACTGTTGGTAGCTTAGATTCTTTGCGCCATTATGAGAAAATCTTGAGGAAAGGCAACAAAACCCATGTGAACAAGAAGGTAGAAGAATTGACCACTAGCTTTTGGGAGGAAGGCGATTTGTGGGTATACAGTGCTAAAAAAGCAGAAATGGATTGAGGAAAAGTGTCCTATTAACCAACCAAGAGATTTTGACTCACATTTGGGCTAAGTATTTCAAGGCCCGAATTTTGAGTCCGCCTAACGATGACCCGGAATGTTGGATGATTTTTCACTTAAAATTAATTACTAAAATATATTACTTTTGCTCAATCTCGGTCTCGGTCACTCTTCCTCTCCTTCAGTCTCAATTTTGGTCTCTATTGCTCAAACCTCACCGAAGTTGGTCCAAAGGGAGCTTCTTGCACCGAAGAAGACGCCGGCGAAAAAGAAGAAGCAAAGGAAGAAAAAAGTGAGGGAGAAACCACAGTAGAAAAAGGAAAAAAGCAAAAAGCAATACTATAGCTTCATGTGGGGTTTGTACATAAAAGGATATTAAAATAAGGCGTATGTTACATTAATGTCTTAAGTTTTCATTTCTTTTACAAAGAAAAGCTTACTGAATTTCAATTTTTTTTATTAATGTTAGTGACTGAATTTTTGGTTTGACAATTCATTACGTAAAATAAGAAAAATTTGATGTTTTGATTATTTCTCCCTCCTCCACAATCTTATGATTTGTCCATTGATTGATAGGTGGTTGCAAACAGCTTCTATTCTCCGTTCATCTGTGGCTGTGGCTGTGGCTTTCATCTTCTTTCTTGGAGATTCCTTTCCCACTTCGCGTTATCAGTTCGATTCCTCCAACAGTGGCTTCAAATTCTCTTCAAAATCATTCTCATTCTTGCATTGAGGTAAGTTGTGCAGATTTTTTGCTCTTCGTTGAACTTATCTTGTTAATTCTTGTAGGTACCTCAATTCTTCAACTGATACAGTTTAAATCTTCTCTGCAGTACTCTACTGCCCCTTCTTTTGATCGTTTGTGTTGA

mRNA sequence

ATGTACGGACGTGGTTGCAAACAGCTTCTATTCTCCGTTCATCTGTGGCTGTGGCTGTGGCTTTCATCTTCTTTCTTGGAGATTCCTTTCCCACTTCGCGTTATCAGTTCGATTCCTCCAACAGTGGCTTCAAATTCTCTTCAAAATCATTCTCATTCTTGCATTGAGGTAAGTTGTGCAGATTTTTTGCTCTTCGTTGAACTTATCTTGTTAATTCTTGTAGGTACCTCAATTCTTCAACTGATACAGTTTAAATCTTCTCTGCAGTACTCTACTGCCCCTTCTTTTGATCGTTTGTGTTGA

Coding sequence (CDS)

ATGTACGGACGTGGTTGCAAACAGCTTCTATTCTCCGTTCATCTGTGGCTGTGGCTGTGGCTTTCATCTTCTTTCTTGGAGATTCCTTTCCCACTTCGCGTTATCAGTTCGATTCCTCCAACAGTGGCTTCAAATTCTCTTCAAAATCATTCTCATTCTTGCATTGAGGTAAGTTGTGCAGATTTTTTGCTCTTCGTTGAACTTATCTTGTTAATTCTTGTAGGTACCTCAATTCTTCAACTGATACAGTTTAAATCTTCTCTGCAGTACTCTACTGCCCCTTCTTTTGATCGTTTGTGTTGA

Protein sequence

MYGRGCKQLLFSVHLWLWLWLSSSFLEIPFPLRVISSIPPTVASNSLQNHSHSCIEVSCADFLLFVELILLILVGTSILQLIQFKSSLQYSTAPSFDRLC
Homology
[Close]
BLAST of CsGy3G032330 vs. NCBI nr
Match: KGN59128.1 (hypothetical protein Csa_3G776880 [Cucumis sativus])

HSP 1 Score: 94.7 bits (234), Expect = 1.8e-16
Identity = 65/100 (65.00%), Postives = 66/100 (66.00%), Query Frame = 0 

Query: 1   MYGRGCKQLLFSVHLXXXXXXXXXFLEIPFPLRVISSIPPTVASNSLQNHSHSCIEVSCA 60
           M+G GCKQLLFSVHLXXXXXXXXXFLEIPFPLRVISSIPPTVASNSLQNHSHSCIE    
Sbjct: 1   MWG-GCKQLLFSVHLXXXXXXXXXFLEIPFPLRVISSIPPTVASNSLQNHSHSCIE---- 60

Query: 61  DFLLFVELILLILVGTSILQLIQFKSSLQYSTAPSFDRLC 101
                                        YSTAPSFDRLC
Sbjct: 61  -----------------------------YSTAPSFDRLC 66

[Close]
BLAST of CsGy3G032330 vs. TrEMBL
Match: tr|A0A0A0LBE6|A0A0A0LBE6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776880 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-16
Identity = 65/100 (65.00%), Postives = 66/100 (66.00%), Query Frame = 0 

Query: 1   MYGRGCKQLLFSVHLXXXXXXXXXFLEIPFPLRVISSIPPTVASNSLQNHSHSCIEVSCA 60
           M+G GCKQLLFSVHLXXXXXXXXXFLEIPFPLRVISSIPPTVASNSLQNHSHSCIE    
Sbjct: 1   MWG-GCKQLLFSVHLXXXXXXXXXFLEIPFPLRVISSIPPTVASNSLQNHSHSCIE---- 60

Query: 61  DFLLFVELILLILVGTSILQLIQFKSSLQYSTAPSFDRLC 101
                                        YSTAPSFDRLC
Sbjct: 61  -----------------------------YSTAPSFDRLC 66

The following BLAST results are available for this feature:
BLAST of CsGy3G032330 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59128.11.8e-1665.00hypothetical protein Csa_3G776880 [Cucumis sativus][more]
BLAST of CsGy3G032330 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G032330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G032330 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LBE6|A0A0A0LBE6_CUCSA1.2e-1665.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776880 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G032330.1CsGy3G032330.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G032330Csa3G776880Cucumber (Chinese Long) v2cgybcuB110
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G032330Cucumber (Gy14) v2cgybcgybB100
CsGy3G032330Cucurbita maxima (Rimu)cgybcmaB306
CsGy3G032330Cucurbita maxima (Rimu)cgybcmaB406
CsGy3G032330Cucurbita maxima (Rimu)cgybcmaB428
CsGy3G032330Cucurbita maxima (Rimu)cgybcmaB452
CsGy3G032330Cucurbita moschata (Rifu)cgybcmoB279
CsGy3G032330Cucurbita moschata (Rifu)cgybcmoB378
CsGy3G032330Cucurbita moschata (Rifu)cgybcmoB383
CsGy3G032330Cucurbita moschata (Rifu)cgybcmoB402
CsGy3G032330Cucurbita moschata (Rifu)cgybcmoB419
CsGy3G032330Cucurbita pepo (Zucchini)cgybcpeB290
CsGy3G032330Cucurbita pepo (Zucchini)cgybcpeB374
CsGy3G032330Cucurbita pepo (Zucchini)cgybcpeB395
CsGy3G032330Cucurbita pepo (Zucchini)cgybcpeB455
CsGy3G032330Cucumber (Chinese Long) v2cgybcuB137
CsGy3G032330Bottle gourd (USVL1VR-Ls)cgyblsiB146
CsGy3G032330Bottle gourd (USVL1VR-Ls)cgyblsiB153
CsGy3G032330Bottle gourd (USVL1VR-Ls)cgyblsiB171
CsGy3G032330Melon (DHL92) v3.5.1cgybmeB184
CsGy3G032330Melon (DHL92) v3.5.1cgybmeB223
CsGy3G032330Watermelon (Charleston Gray)cgybwcgB195
CsGy3G032330Melon (DHL92) v3.6.1cgybmedB185
CsGy3G032330Melon (DHL92) v3.6.1cgybmedB225
CsGy3G032330Watermelon (Charleston Gray)cgybwcgB179
CsGy3G032330Watermelon (Charleston Gray)cgybwcgB202
CsGy3G032330Watermelon (97103) v1cgybwmB250
CsGy3G032330Watermelon (97103) v1cgybwmB251
CsGy3G032330Watermelon (97103) v1cgybwmB187
CsGy3G032330Wild cucumber (PI 183967)cgybcpiB111
CsGy3G032330Wild cucumber (PI 183967)cgybcpiB140
CsGy3G032330Silver-seed gourdcarcgybB0162
CsGy3G032330Silver-seed gourdcarcgybB0254
CsGy3G032330Silver-seed gourdcarcgybB0263
CsGy3G032330Silver-seed gourdcarcgybB0796
CsGy3G032330Cucumber (Chinese Long) v3cgybcucB117
CsGy3G032330Cucumber (Chinese Long) v3cgybcucB141
CsGy3G032330Watermelon (97103) v2cgybwmbB178
CsGy3G032330Watermelon (97103) v2cgybwmbB187
CsGy3G032330Watermelon (97103) v2cgybwmbB195
CsGy3G032330Wax gourdcgybwgoB215
CsGy3G032330Wax gourdcgybwgoB321