CsGy3G023230 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTAGCGGCATTGGAGGTTTTTGCCTAGCTTGCTATGTCTCTCTTTGGCTCAACCTTCCTCACTGGAACGTCGTCGCCCACGACTTTCTCTGTCAGATTTTAAAGAAGGTATCGTTCAGCTCCATAAGACCTAATTGCCGACTAACATCGCGGAAGCAAATGGTGAAGATGGTTGGTCGATTTTTCAAAATCTGTCTATTTTAGAAACTTGCATGTTTTTACTGTAGCTAAAATTGAGCAATAATTTAAAAAATTTGGTAGATTTCTACCTAATGATGTGTATTTATTAGGTCTTGGAGGCCCTCGCTTTTGATTATTTGTTTGGATTGGCTCACATGGATGGTTCTTGATGCATTTGTTGGTGGTGCCATGAATAGGAAGGGAAAGAGGGAGAGGTAGTTACCAGTCAGATGCTCCTAAGGGACGGTTTGGTTCTCATAGTTTGGGTCGAGGAAGCAGCCAAGATGGAAGCGACTATGGTCAGTTGAGAGGCAACGGTTTCCCTCAGTGGTACCACAAGGTTCAATAG ATGTTTAGCGGCATTGGAGGTTTTTGCCTAGCTTGCTATGTCTCTCTTTGGCTCAACCTTCCTCACTGGAACGTCGTCGCCCACGACTTTCTCTGTCAGATTTTAAAGAAGGTATCGTTCAGCTCCATAAGACCTAATTGCCGACTAACATCGCGGAAGCAAATGGTGAAGATGGTCTTGGAGGCCCTCGCTTTTGATTATTTGTTTGGATTGGCTCACATGGATGGAAGGGAAAGAGGGAGAGGTAGTTACCAGTCAGATGCTCCTAAGGGACGGTTTGGTTCTCATAGTTTGGGTCGAGGAAGCAGCCAAGATGGAAGCGACTATGGTCAGTTGAGAGGCAACGGTTTCCCTCAGTGGTACCACAAGGTTCAATAG ATGTTTAGCGGCATTGGAGGTTTTTGCCTAGCTTGCTATGTCTCTCTTTGGCTCAACCTTCCTCACTGGAACGTCGTCGCCCACGACTTTCTCTGTCAGATTTTAAAGAAGGTATCGTTCAGCTCCATAAGACCTAATTGCCGACTAACATCGCGGAAGCAAATGGTGAAGATGGTCTTGGAGGCCCTCGCTTTTGATTATTTGTTTGGATTGGCTCACATGGATGGAAGGGAAAGAGGGAGAGGTAGTTACCAGTCAGATGCTCCTAAGGGACGGTTTGGTTCTCATAGTTTGGGTCGAGGAAGCAGCCAAGATGGAAGCGACTATGGTCAGTTGAGAGGCAACGGTTTCCCTCAGTGGTACCACAAGGTTCAATAG MFSGIGGFCLACYVSLWLNLPHWNVVAHDFLCQILKKVSFSSIRPNCRLTSRKQMVKMVLEALAFDYLFGLAHMDGRERGRGSYQSDAPKGRFGSHSLGRGSSQDGSDYGQLRGNGFPQWYHKVQ
BLAST of CsGy3G023230 vs. NCBI nr
Match: KGN57089.1 (hypothetical protein Csa_3G152650 [Cucumis sativus]) HSP 1 Score: 228.8 bits (582), Expect = 1.0e-56 Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 0
BLAST of CsGy3G023230 vs. NCBI nr
Match: KGN58292.1 (hypothetical protein Csa_3G608710 [Cucumis sativus]) HSP 1 Score: 110.2 bits (274), Expect = 5.3e-21 Identity = 69/141 (48.94%), Postives = 79/141 (56.03%), Query Frame = 0
BLAST of CsGy3G023230 vs. NCBI nr
Match: XP_011656769.1 (PREDICTED: putative G3BP-like protein [Cucumis sativus] >XP_011656770.1 PREDICTED: putative G3BP-like protein [Cucumis sativus] >KGN46374.1 hypothetical protein Csa_6G088020 [Cucumis sativus]) HSP 1 Score: 84.7 bits (208), Expect = 2.4e-13 Identity = 43/50 (86.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of CsGy3G023230 vs. NCBI nr
Match: XP_022960141.1 (putative G3BP-like protein isoform X1 [Cucurbita moschata]) HSP 1 Score: 73.6 bits (179), Expect = 5.5e-10 Identity = 40/57 (70.18%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of CsGy3G023230 vs. NCBI nr
Match: XP_023514584.1 (putative G3BP-like protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 73.6 bits (179), Expect = 5.5e-10 Identity = 40/57 (70.18%), Postives = 43/57 (75.44%), Query Frame = 0
BLAST of CsGy3G023230 vs. TrEMBL
Match: tr|A0A0A0L7V2|A0A0A0L7V2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G152650 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 6.8e-57 Identity = 111/120 (92.50%), Postives = 113/120 (94.17%), Query Frame = 0
BLAST of CsGy3G023230 vs. TrEMBL
Match: tr|A0A0A0LC60|A0A0A0LC60_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608710 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 3.5e-21 Identity = 69/141 (48.94%), Postives = 79/141 (56.03%), Query Frame = 0
BLAST of CsGy3G023230 vs. TrEMBL
Match: tr|A0A0A0KBZ9|A0A0A0KBZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088020 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.6e-13 Identity = 43/50 (86.00%), Postives = 45/50 (90.00%), Query Frame = 0
BLAST of CsGy3G023230 vs. TrEMBL
Match: tr|A0A061EPC2|A0A061EPC2_THECC (Nuclear transport factor 2 family protein with RNA binding domain isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_021007 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.7e-07 Identity = 40/84 (47.62%), Postives = 47/84 (55.95%), Query Frame = 0
BLAST of CsGy3G023230 vs. TrEMBL
Match: tr|I1JP73|I1JP73_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100787900 PE=4 SV=2) HSP 1 Score: 63.9 bits (154), Expect = 2.9e-07 Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |